RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.27
ACTN1-211ENST00000553882 STAG1Q8WVM7 1258 aa16.77■□□□□ 0.27
ACTN1-211ENST00000553882 ZNF215Q9UL58 517 aaPredicted RBP16.77■□□□□ 0.27
ACTN1-211ENST00000553882 IKBKBO14920 756 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 UBASH3AP57075 661 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 MYL5Q02045 173 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 CCDC150Q8NCX0 1101 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 LRP5O75197 1615 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 CYP7A1P22680 504 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 GOLGA8FQ08AF8 430 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 GOLGA8DPQ0D2H9 430 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 PDILTQ8N807 584 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 OXER1Q8TDS5 423 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 FANCLQ9NW38 375 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 STK36Q9NRP7 1315 aa16.76■□□□□ 0.27
ACTN1-211ENST00000553882 hCG_1642624A0A1W2PR95 340 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 BMP6P22004 513 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 GYG1P46976 350 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 AK7Q96M32 723 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 UBAC1Q9BSL1 405 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 PCDHB6Q9Y5E3 794 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 PDE4BQ07343 736 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 PPARAQ07869 468 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 GRAMD1CQ8IYS0 662 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 ZNF654Q8IZM8 581 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 KIF18AQ8NI77 898 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 WASF1Q92558 559 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 PPP1R13BQ96KQ4 1090 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 RAI14Q9P0K7 980 aa16.75■□□□□ 0.27
ACTN1-211ENST00000553882 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 POLR2DO15514 142 aaKnown RBP16.74■□□□□ 0.27
ACTN1-211ENST00000553882 GNAT2P19087 354 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 SIK1P57059 783 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 ITPK1Q13572 414 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 ZNF827Q17R98 1081 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 CRACR2BQ8N4Y2 399 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-211ENST00000553882 RGS22Q8NE09 1264 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 CYP2D7A0A087X1C5 515 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 FAM237AA0A1B0GTK4 181 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 TMEM232C9JQI7 657 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 NTSR2O95665 410 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 FANCBQ8NB91 859 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
ACTN1-211ENST00000553882 NPHP1O15259 732 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 ARAP2Q8WZ64 1704 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 DOCK2Q92608 1830 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 PRDM1O75626 825 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 SYT10Q6XYQ8 523 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 USP49Q70CQ1 688 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 CABP5Q9NP86 173 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 TNKSO95271 1327 aa16.73■□□□□ 0.27
ACTN1-211ENST00000553882 DEXIO95424 95 aa16.72■□□□□ 0.27
ACTN1-211ENST00000553882 DDB1Q16531 1140 aa16.72■□□□□ 0.27
ACTN1-211ENST00000553882 FBXO2Q9UK22 296 aaPredicted RBP16.72■□□□□ 0.27
ACTN1-211ENST00000553882 DOT1LQ8TEK3 1739 aa16.72■□□□□ 0.27
ACTN1-211ENST00000553882 COL4A1P02462 1669 aa16.72■□□□□ 0.27
ACTN1-211ENST00000553882 FAM205CA6NFA0 338 aa16.72■□□□□ 0.27
ACTN1-211ENST00000553882 PARP10Q53GL7 1025 aa16.72■□□□□ 0.27
ACTN1-211ENST00000553882 RNF41Q9H4P4 317 aaPredicted RBP16.72■□□□□ 0.27
ACTN1-211ENST00000553882 SERTAD1Q9UHV2 236 aa16.72■□□□□ 0.27
ACTN1-211ENST00000553882 NRDCO43847 1150 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 POSTNQ15063 836 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 RILPL1Q5EBL4 403 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 C3orf67Q6ZVT6 689 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 TRMT44Q8IYL2 757 aaKnown RBP16.71■□□□□ 0.27
ACTN1-211ENST00000553882 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-211ENST00000553882 VPS54Q9P1Q0 977 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 MAGEB6P1A0A0J9YX57 407 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 CCDC196A0A1B0GTZ2 297 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 PTPREP23469 700 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 DYNLL1P63167 89 aaKnown RBP16.71■□□□□ 0.27
ACTN1-211ENST00000553882 MDM2Q00987 491 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-211ENST00000553882 SYCP1Q15431 976 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 HOMER1Q86YM7 354 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 SMAP1Q8IYB5 467 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-211ENST00000553882 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
ACTN1-211ENST00000553882 ELF2Q15723 593 aa16.7■□□□□ 0.26
ACTN1-211ENST00000553882 SHISA4Q96DD7 197 aa16.7■□□□□ 0.26
ACTN1-211ENST00000553882 KCND1Q9NSA2 647 aa16.7■□□□□ 0.26
ACTN1-211ENST00000553882 KCNQ4P56696 695 aa16.7■□□□□ 0.26
ACTN1-211ENST00000553882 FMR1Q06787 632 aaKnown RBP eCLIP16.7■□□□□ 0.26
ACTN1-211ENST00000553882 ESR2Q92731 530 aa16.7■□□□□ 0.26
ACTN1-211ENST00000553882 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
ACTN1-211ENST00000553882 MYH14Q7Z406 1995 aaKnown RBP16.7■□□□□ 0.26
ACTN1-211ENST00000553882 BAZ2BQ9UIF8 2168 aaKnown RBP16.7■□□□□ 0.26
ACTN1-211ENST00000553882 TOP1P11387 765 aaKnown RBP16.69■□□□□ 0.26
ACTN1-211ENST00000553882 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 TMTC2Q8N394 836 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 ENAHQ8N8S7 591 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-211ENST00000553882 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 NID2Q14112 1375 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 CBFA2T2O43439 604 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms