RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 LHX6Q9UPM6 363 aa10.15□□□□□ -0.78
PSEN1-209ENST00000553855 BAG3O95817 575 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 MCAMP43121 646 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 RASA3Q14644 834 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 GRIK5Q16478 980 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 SAPCD2Q86UD0 394 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 CDAN1Q8IWY9 1227 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 DNAJC5GQ8N7S2 189 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 PROCA1Q8NCQ7 364 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-209ENST00000553855 AIDAQ96BJ3 306 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 CAPNS2Q96L46 248 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 RWDD1Q9H446 243 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-209ENST00000553855 DCTPP1Q9H773 170 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 USP40Q9NVE5 1235 aa10.14□□□□□ -0.79
PSEN1-209ENST00000553855 SCAF8Q9UPN6 1271 aaKnown RBP10.14□□□□□ -0.79
PSEN1-209ENST00000553855 WDR33Q9C0J8 1336 aaKnown RBP10.13□□□□□ -0.79
PSEN1-209ENST00000553855 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-209ENST00000553855 ZAP70P43403 619 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 IREB2P48200 963 aaKnown RBP10.13□□□□□ -0.79
PSEN1-209ENST00000553855 VEGFBP49765 207 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 ZNF157P51786 506 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-209ENST00000553855 MAP3K12Q12852 859 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 PRKG1Q13976 671 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 DIXDC1Q155Q3 683 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 FKBP1CQ5VVH2 108 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 PRAMEF18Q5VWM3 479 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 NAA16Q6N069 864 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-209ENST00000553855 RGMBQ6NW40 437 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 TMED8Q6PL24 325 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-209ENST00000553855 POLR3EQ9NVU0 708 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 TLR7Q9NYK1 1049 aaKnown RBP10.13□□□□□ -0.79
PSEN1-209ENST00000553855 DAGLAQ9Y4D2 1042 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 PCDHAC2Q9Y5I4 1007 aa10.13□□□□□ -0.79
PSEN1-209ENST00000553855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-209ENST00000553855 MROH7-TTC4A0A0A0MT08 1334 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 IDH1O75874 414 aaKnown RBP10.12□□□□□ -0.79
PSEN1-209ENST00000553855 BTDP43251 543 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 MAP2K1Q02750 393 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-209ENST00000553855 MECOMQ03112 1051 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 DCAF15Q66K64 600 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 CYP4F22Q6NT55 531 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 APOBEC3HQ6NTF7 200 aaKnown RBP10.12□□□□□ -0.79
PSEN1-209ENST00000553855 DLK2Q6UY11 383 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 FAM83AQ86UY5 434 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 CERS3Q8IU89 383 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 ZSCAN29Q8IWY8 852 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-209ENST00000553855 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.12□□□□□ -0.79
PSEN1-209ENST00000553855 GCC1Q96CN9 775 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 DNAJC2Q99543 621 aaKnown RBP10.12□□□□□ -0.79
PSEN1-209ENST00000553855 ANGEL1Q9UNK9 670 aaKnown RBP10.12□□□□□ -0.79
PSEN1-209ENST00000553855 ARAP2Q8WZ64 1704 aa10.12□□□□□ -0.79
PSEN1-209ENST00000553855 UBE2Q2LH0YL09 131 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 ERC2O15083 957 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 MAP2K2P36507 400 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 PRSS12P56730 875 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 NOGQ13253 232 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 CDC42EP5Q6NZY7 148 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 PI16Q6UXB8 463 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 JMYQ8N9B5 988 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 FAM151AQ8WW52 585 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 NSUN4Q96CB9 384 aaKnown RBP10.11□□□□□ -0.79
PSEN1-209ENST00000553855 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
PSEN1-209ENST00000553855 ADAM33Q9BZ11 813 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.11□□□□□ -0.79
PSEN1-209ENST00000553855 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
PSEN1-209ENST00000553855 GAKO14976 1311 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 MYH13Q9UKX3 1938 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 UNCXA6NJT0 531 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-209ENST00000553855 CYP2E1P05181 493 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-209ENST00000553855 CYP7A1P22680 504 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 CLK2P49760 499 aaKnown RBP10.1□□□□□ -0.79
PSEN1-209ENST00000553855 CACNB3P54284 484 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 TCP10Q12799 353 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 HDAC1Q13547 482 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-209ENST00000553855 LRRFIP1Q32MZ4 808 aaKnown RBP10.1□□□□□ -0.79
PSEN1-209ENST00000553855 NBPF12Q5TAG4 269 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-209ENST00000553855 ANKRD45Q5TZF3 282 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 ZSCAN25Q6NSZ9 544 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 EXOC6Q8TAG9 804 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 SLC10A4Q96EP9 437 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 TMEM39BQ9GZU3 492 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 ECHDC1Q9NTX5 307 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 CSADQ9Y600 493 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 TRPM7Q96QT4 1865 aa10.1□□□□□ -0.79
PSEN1-209ENST00000553855 GPR75-ASB3A0A0A6YYF3 556 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 GOLIM4O00461 696 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 ENTPD3O75355 529 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 ATP5JP18859 108 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 PICALMQ13492 652 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 TEX11Q8IYF3 940 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 ANKRD13AQ8IZ07 590 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 TRIM34Q9BYJ4 488 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 BOLA2Q9H3K6 86 aa10.09□□□□□ -0.79
PSEN1-209ENST00000553855 PIH1D3Q9NQM4 214 aaKnown RBP10.09□□□□□ -0.79
PSEN1-209ENST00000553855 PAG1Q9NWQ8 432 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms