RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 GRAPLQ8TC17 118 aaPredicted RBP17.9■□□□□ 0.46
ABCD4-218ENST00000553486 STAG1Q8WVM7 1258 aa17.9■□□□□ 0.46
ABCD4-218ENST00000553486 NEDD4P46934 1319 aa17.9■□□□□ 0.46
ABCD4-218ENST00000553486 GOLGA6L4A6NEF3 574 aa17.89■□□□□ 0.45
ABCD4-218ENST00000553486 EPS15P42566 896 aa17.89■□□□□ 0.45
ABCD4-218ENST00000553486 CTDSPL2Q05D32 466 aa17.89■□□□□ 0.45
ABCD4-218ENST00000553486 CCDC173Q0VFZ6 552 aa17.89■□□□□ 0.45
ABCD4-218ENST00000553486 TPRNQ4KMQ1 711 aa17.89■□□□□ 0.45
ABCD4-218ENST00000553486 TMED8Q6PL24 325 aaPredicted RBP17.89■□□□□ 0.45
ABCD4-218ENST00000553486 DPP8Q6V1X1 898 aaPredicted RBP17.89■□□□□ 0.45
ABCD4-218ENST00000553486 SP8Q8IXZ3 490 aa17.89■□□□□ 0.45
ABCD4-218ENST00000553486 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
ABCD4-218ENST00000553486 LEO1Q8WVC0 666 aaPredicted RBP17.89■□□□□ 0.45
ABCD4-218ENST00000553486 RNF41Q9H4P4 317 aaPredicted RBP17.89■□□□□ 0.45
ABCD4-218ENST00000553486 TFIP11Q9UBB9 837 aaKnown RBP17.89■□□□□ 0.45
ABCD4-218ENST00000553486 LTBP1Q14766 1721 aa17.89■□□□□ 0.45
ABCD4-218ENST00000553486 FDPSP14324 419 aaKnown RBP17.88■□□□□ 0.45
ABCD4-218ENST00000553486 CPLX2Q6PUV4 134 aaKnown RBP17.88■□□□□ 0.45
ABCD4-218ENST00000553486 RGS22Q8NE09 1264 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 IGDCC4Q8TDY8 1250 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 CDKL5O76039 1030 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 LIFRP42702 1097 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 TMEM67Q5HYA8 995 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 SGMS1Q86VZ5 419 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 ZNF396Q96N95 335 aaPredicted RBP17.88■□□□□ 0.45
ABCD4-218ENST00000553486 MTA3Q9BTC8 594 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 ORC3Q9UBD5 711 aaPredicted RBP17.88■□□□□ 0.45
ABCD4-218ENST00000553486 ZNRF3Q9ULT6 936 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 LEMD3Q9Y2U8 911 aa17.88■□□□□ 0.45
ABCD4-218ENST00000553486 VEGFBP49765 207 aa17.87■□□□□ 0.45
ABCD4-218ENST00000553486 METAP2P50579 478 aaKnown RBP eCLIP17.87■□□□□ 0.45
ABCD4-218ENST00000553486 FOSBP53539 338 aa17.87■□□□□ 0.45
ABCD4-218ENST00000553486 NFXL1Q6ZNB6 911 aa17.87■□□□□ 0.45
ABCD4-218ENST00000553486 ADGRA1Q86SQ6 560 aa17.87■□□□□ 0.45
ABCD4-218ENST00000553486 MPNDQ8N594 471 aa17.87■□□□□ 0.45
ABCD4-218ENST00000553486 ZSWIM5Q9P217 1185 aa17.87■□□□□ 0.45
ABCD4-218ENST00000553486 IFIT3O14879 490 aaKnown RBP17.86■□□□□ 0.45
ABCD4-218ENST00000553486 IGSF3O75054 1194 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 KDM4AO75164 1064 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 KLRK1P26718 216 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 KIAA2012Q0VF49 1180 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 SART3Q15020 963 aaKnown RBP17.86■□□□□ 0.45
ABCD4-218ENST00000553486 APOA5Q6Q788 366 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 USP50Q70EL3 339 aaPredicted RBP17.86■□□□□ 0.45
ABCD4-218ENST00000553486 C8orf76Q96K31 380 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 PPP1R9BQ96SB3 815 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 RIOK1Q9BRS2 568 aaKnown RBP17.86■□□□□ 0.45
ABCD4-218ENST00000553486 LY9Q9HBG7 655 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 RASSF10A6NK89 507 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 ZBTB43O43298 467 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 CXCL9Q07325 125 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 PPARAQ07869 468 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 GIMAP6Q6P9H5 292 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 SYNE3Q6ZMZ3 975 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 GPRC5DQ9NZD1 345 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 ANKIB1Q9P2G1 1089 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 ANAPC4Q9UJX5 808 aa17.86■□□□□ 0.45
ABCD4-218ENST00000553486 MAST2Q6P0Q8 1798 aa17.85■□□□□ 0.45
ABCD4-218ENST00000553486 CCDC69A6NI79 296 aa17.85■□□□□ 0.45
ABCD4-218ENST00000553486 SPTY2D1Q68D10 685 aaPredicted RBP17.85■□□□□ 0.45
ABCD4-218ENST00000553486 TMC4Q7Z404 712 aa17.85■□□□□ 0.45
ABCD4-218ENST00000553486 TMTC2Q8N394 836 aa17.85■□□□□ 0.45
ABCD4-218ENST00000553486 NKX2-3Q8TAU0 364 aa17.85■□□□□ 0.45
ABCD4-218ENST00000553486 NSUN4Q96CB9 384 aaKnown RBP17.85■□□□□ 0.45
ABCD4-218ENST00000553486 INCENPQ9NQS7 918 aa17.85■□□□□ 0.45
ABCD4-218ENST00000553486 TOMM22Q9NS69 142 aa17.85■□□□□ 0.45
ABCD4-218ENST00000553486 ERICH2A1L162 156 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 RRP12Q5JTH9 1297 aaKnown RBP17.84■□□□□ 0.45
ABCD4-218ENST00000553486 RAB11FIP4Q86YS3 637 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 SDR42E1Q8WUS8 393 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 TRIM44Q96DX7 344 aaPredicted RBP17.84■□□□□ 0.45
ABCD4-218ENST00000553486 SLC12A7Q9Y666 1083 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 XDHP47989 1333 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 MINDY4BA8MYZ0 360 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 PPFIA3O75145 1194 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 ADD1P35611 737 aaKnown RBP17.84■□□□□ 0.45
ABCD4-218ENST00000553486 GUCY1B3Q02153 619 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 MECOMQ03112 1051 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 CHAF1AQ13111 956 aaPredicted RBP17.84■□□□□ 0.45
ABCD4-218ENST00000553486 FAM43AQ8N2R8 423 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 FBXO18Q8NFZ0 1043 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 ADARB2Q9NS39 739 aaKnown RBP17.84■□□□□ 0.45
ABCD4-218ENST00000553486 TACC3Q9Y6A5 838 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 IRS2Q9Y4H2 1338 aa17.84■□□□□ 0.45
ABCD4-218ENST00000553486 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.44
ABCD4-218ENST00000553486 FOXN1O15353 648 aa17.83■□□□□ 0.44
ABCD4-218ENST00000553486 DYNLL1P63167 89 aaKnown RBP17.83■□□□□ 0.44
ABCD4-218ENST00000553486 DEFB115Q30KQ5 88 aa17.83■□□□□ 0.44
ABCD4-218ENST00000553486 RCOR1Q9UKL0 485 aa17.83■□□□□ 0.44
ABCD4-218ENST00000553486 ABT1Q9ULW3 272 aaKnown RBP17.83■□□□□ 0.44
ABCD4-218ENST00000553486 BAZ2AQ9UIF9 1905 aaKnown RBP17.83■□□□□ 0.44
ABCD4-218ENST00000553486 PCP11498 1178 aaKnown RBP17.82■□□□□ 0.44
ABCD4-218ENST00000553486 GMPSP49915 693 aaPredicted RBP17.82■□□□□ 0.44
ABCD4-218ENST00000553486 WTAPQ15007 396 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 CIAPIN1Q6FI81 312 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 MICU3Q86XE3 530 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 DDX19AQ9NUU7 478 aaKnown RBP17.82■□□□□ 0.44
ABCD4-218ENST00000553486 DUOX1Q9NRD9 1551 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 FMR1Q06787 632 aaKnown RBP eCLIP17.82■□□□□ 0.44
ABCD4-218ENST00000553486 UVSSAQ2YD98 709 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms