RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 KRT85P78386 507 aa21.88■■□□□ 1.09
LRP1-204ENST00000553277 STOX1Q6ZVD7 989 aa21.88■■□□□ 1.09
LRP1-204ENST00000553277 FOCADQ5VW36 1801 aa21.87■■□□□ 1.09
LRP1-204ENST00000553277 E7EWF7 191 aa21.87■■□□□ 1.09
LRP1-204ENST00000553277 RPS12P25398 132 aaKnown RBP21.87■■□□□ 1.09
LRP1-204ENST00000553277 DNM1Q05193 864 aaKnown RBP21.87■■□□□ 1.09
LRP1-204ENST00000553277 DHX32Q7L7V1 743 aaKnown RBP21.87■■□□□ 1.09
LRP1-204ENST00000553277 TCHHQ07283 1943 aa21.87■■□□□ 1.09
LRP1-204ENST00000553277 VPS37CA5D8V6 355 aaPredicted RBP21.86■■□□□ 1.09
LRP1-204ENST00000553277 TDO2P48775 406 aa21.86■■□□□ 1.09
LRP1-204ENST00000553277 MTMR14Q8NCE2 650 aa21.86■■□□□ 1.09
LRP1-204ENST00000553277 SCAND2PQ9GZW5 306 aaPredicted RBP21.86■■□□□ 1.09
LRP1-204ENST00000553277 BAZ2AQ9UIF9 1905 aaKnown RBP21.86■■□□□ 1.09
LRP1-204ENST00000553277 TIAM2Q8IVF5 1701 aa21.86■■□□□ 1.09
LRP1-204ENST00000553277 NPM3O75607 178 aaKnown RBP21.85■■□□□ 1.09
LRP1-204ENST00000553277 FOXD4L6Q3SYB3 417 aaPredicted RBP21.85■■□□□ 1.09
LRP1-204ENST00000553277 CTR9Q6PD62 1173 aa21.85■■□□□ 1.09
LRP1-204ENST00000553277 FOXD4L3Q6VB84 417 aaPredicted RBP21.85■■□□□ 1.09
LRP1-204ENST00000553277 FIBPO43427 364 aa21.85■■□□□ 1.09
LRP1-204ENST00000553277 PFKFB2O60825 505 aa21.85■■□□□ 1.09
LRP1-204ENST00000553277 FGRP09769 529 aa21.85■■□□□ 1.09
LRP1-204ENST00000553277 EXOSC10Q01780 885 aaKnown RBP21.85■■□□□ 1.09
LRP1-204ENST00000553277 Q6ZUG5 572 aa21.85■■□□□ 1.09
LRP1-204ENST00000553277 NOL7Q9UMY1 257 aaKnown RBP21.85■■□□□ 1.09
LRP1-204ENST00000553277 DDX60LQ5H9U9 1706 aaKnown RBP21.84■■□□□ 1.09
LRP1-204ENST00000553277 WDHD1O75717 1129 aaPredicted RBP21.84■■□□□ 1.09
LRP1-204ENST00000553277 USP17L8P0C7I0 530 aa21.84■■□□□ 1.09
LRP1-204ENST00000553277 EIF6P56537 245 aaKnown RBP21.84■■□□□ 1.09
LRP1-204ENST00000553277 COL9A3Q14050 684 aaPredicted RBP21.84■■□□□ 1.09
LRP1-204ENST00000553277 CDC42EP5Q6NZY7 148 aa21.84■■□□□ 1.09
LRP1-204ENST00000553277 TEX11Q8IYF3 940 aa21.84■■□□□ 1.09
LRP1-204ENST00000553277 SMARCC2Q8TAQ2 1214 aa21.84■■□□□ 1.09
LRP1-204ENST00000553277 DPF2Q92785 391 aa21.84■■□□□ 1.09
LRP1-204ENST00000553277 ARPP21Q9UBL0 812 aaPredicted RBP21.84■■□□□ 1.09
LRP1-204ENST00000553277 ADAMTSL1Q8N6G6 1762 aa21.84■■□□□ 1.09
LRP1-204ENST00000553277 UTRNP46939 3433 aa21.84■■□□□ 1.09
LRP1-204ENST00000553277 ECM29Q5VYK3 1845 aa21.84■■□□□ 1.09
LRP1-204ENST00000553277 USP17L12C9JPN9 530 aa21.83■■□□□ 1.09
LRP1-204ENST00000553277 USP17L21D6R901 530 aa21.83■■□□□ 1.09
LRP1-204ENST00000553277 PCP11498 1178 aaKnown RBP21.83■■□□□ 1.09
LRP1-204ENST00000553277 ZNF280AP59817 542 aaPredicted RBP21.83■■□□□ 1.09
LRP1-204ENST00000553277 HAND2P61296 217 aa21.83■■□□□ 1.09
LRP1-204ENST00000553277 PPARAQ07869 468 aa21.83■■□□□ 1.09
LRP1-204ENST00000553277 TBC1D10CQ8IV04 446 aa21.83■■□□□ 1.09
LRP1-204ENST00000553277 OGFOD1Q8N543 542 aa21.83■■□□□ 1.09
LRP1-204ENST00000553277 STAG1Q8WVM7 1258 aa21.83■■□□□ 1.09
LRP1-204ENST00000553277 ZBED3Q96IU2 234 aaPredicted RBP21.83■■□□□ 1.09
LRP1-204ENST00000553277 ZSCAN16Q9H4T2 348 aaPredicted RBP21.83■■□□□ 1.09
LRP1-204ENST00000553277 HDAC9Q9UKV0 1011 aa21.83■■□□□ 1.09
LRP1-204ENST00000553277 ZBTB12Q9Y330 459 aaPredicted RBP21.83■■□□□ 1.09
LRP1-204ENST00000553277 CDC37L1Q7L3B6 337 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 TGFBRAP1Q8WUH2 860 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 IDI2Q9BXS1 227 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 CCDC39Q9UFE4 941 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 KIF3AQ9Y496 699 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 USP5P45974 858 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 HMGN5P82970 282 aaKnown RBP21.82■■□□□ 1.08
LRP1-204ENST00000553277 CFAP100Q494V2 611 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 AKNAD1Q5T1N1 836 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 C12orf60Q5U649 245 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 TCEANC2Q96MN5 208 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 USP40Q9NVE5 1235 aa21.82■■□□□ 1.08
LRP1-204ENST00000553277 FLT1P17948 1338 aa21.81■■□□□ 1.08
LRP1-204ENST00000553277 WDR19Q8NEZ3 1342 aa21.81■■□□□ 1.08
LRP1-204ENST00000553277 SPDYE2BA6NHP3 402 aa21.81■■□□□ 1.08
LRP1-204ENST00000553277 SPDYE6P0CI01 402 aa21.81■■□□□ 1.08
LRP1-204ENST00000553277 EVCP57679 992 aa21.81■■□□□ 1.08
LRP1-204ENST00000553277 FUCA2Q9BTY2 467 aa21.81■■□□□ 1.08
LRP1-204ENST00000553277 LAMB1P07942 1786 aa21.81■■□□□ 1.08
LRP1-204ENST00000553277 ROBO3Q96MS0 1386 aa21.8■■□□□ 1.08
LRP1-204ENST00000553277 NAV1Q8NEY1 1877 aa21.8■■□□□ 1.08
LRP1-204ENST00000553277 MSNP26038 577 aaKnown RBP21.8■■□□□ 1.08
LRP1-204ENST00000553277 NT5C2P49902 561 aa21.8■■□□□ 1.08
LRP1-204ENST00000553277 MB21D2Q8IYB1 491 aaPredicted RBP21.8■■□□□ 1.08
LRP1-204ENST00000553277 NCOA7Q8NI08 942 aa21.8■■□□□ 1.08
LRP1-204ENST00000553277 ZNF274Q96GC6 653 aaPredicted RBP21.8■■□□□ 1.08
LRP1-204ENST00000553277 RNF41Q9H4P4 317 aaPredicted RBP21.8■■□□□ 1.08
LRP1-204ENST00000553277 CNNM2Q9H8M5 875 aa21.8■■□□□ 1.08
LRP1-204ENST00000553277 MCM9Q9NXL9 1143 aa21.8■■□□□ 1.08
LRP1-204ENST00000553277 TACC3Q9Y6A5 838 aa21.8■■□□□ 1.08
LRP1-204ENST00000553277 PRMT6Q96LA8 375 aaPredicted RBP21.79■■□□□ 1.08
LRP1-204ENST00000553277 PCDHAC2Q9Y5I4 1007 aa21.79■■□□□ 1.08
LRP1-204ENST00000553277 ZNF541Q9H0D2 1346 aa21.79■■□□□ 1.08
LRP1-204ENST00000553277 ZNF500O60304 480 aaPredicted RBP21.79■■□□□ 1.08
LRP1-204ENST00000553277 ATL3Q6DD88 541 aa21.79■■□□□ 1.08
LRP1-204ENST00000553277 TTC6Q86TZ1 520 aa21.79■■□□□ 1.08
LRP1-204ENST00000553277 GPC2Q8N158 579 aa21.79■■□□□ 1.08
LRP1-204ENST00000553277 RGS22Q8NE09 1264 aa21.79■■□□□ 1.08
LRP1-204ENST00000553277 MYH1P12882 1939 aa21.78■■□□□ 1.08
LRP1-204ENST00000553277 GRIN3BO60391 1043 aa21.78■■□□□ 1.08
LRP1-204ENST00000553277 CTDSPL2Q05D32 466 aa21.78■■□□□ 1.08
LRP1-204ENST00000553277 FKBP1CQ5VVH2 108 aa21.78■■□□□ 1.08
LRP1-204ENST00000553277 MFSD6Q6ZSS7 791 aa21.78■■□□□ 1.08
LRP1-204ENST00000553277 MAPKAPK5Q8IW41 473 aa21.78■■□□□ 1.08
LRP1-204ENST00000553277 BRF1Q92994 677 aa21.78■■□□□ 1.08
LRP1-204ENST00000553277 DDX4Q9NQI0 724 aaKnown RBP21.78■■□□□ 1.08
LRP1-204ENST00000553277 TAOK2Q9UL54 1235 aa21.78■■□□□ 1.08
LRP1-204ENST00000553277 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.78■■□□□ 1.08
LRP1-204ENST00000553277 MINDY4BA8MYZ0 360 aa21.77■■□□□ 1.08
LRP1-204ENST00000553277 ORC4O43929 436 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms