RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CCDC17Q96LX7 622 aa12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 STRBPQ96SI9 672 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 SAGE1Q9NXZ1 904 aa12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 MYH7P12883 1935 aa12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 SPDYE5A6NIY4 337 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 CXCL11O14625 94 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 GPAA1O43292 621 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 PCP11498 1178 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 CETPP11597 493 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 TDO2P48775 406 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 DYNLL1P63167 89 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 PPIL2Q13356 520 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 SBK1Q52WX2 424 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 TTC22Q5TAA0 569 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 SPRYD7Q5W111 196 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 CYP4F22Q6NT55 531 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 MIGA2Q7L4E1 593 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 SCYL3Q8IZE3 742 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 OTUD7AQ8TE49 926 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 DDX4Q9NQI0 724 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 CTNNA3Q9UI47 895 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 RAD50Q92878 1312 aa12.27□□□□□ -0.45
TRAFD1-208ENST00000552890 DDTLA6NHG4 134 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 TM4SF4P48230 202 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 FMR1Q06787 632 aaKnown RBP eCLIP12.26□□□□□ -0.454e-6■■□□□ 13.3
TRAFD1-208ENST00000552890 PDE4BQ07343 736 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 VGLL4Q14135 290 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 RASAL3Q86YV0 1011 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 LCORLQ8N3X6 602 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 OSBP2Q969R2 916 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 PUS7LQ9H0K6 701 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 NAPBQ9H115 298 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 SH2D4AQ9H788 454 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 PALD1Q9ULE6 856 aa12.26□□□□□ -0.45
TRAFD1-208ENST00000552890 SDSP20132 328 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 CAP2P40123 477 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 GRM1Q13255 1194 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 ARHGEF6Q15052 776 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 ALX1Q15699 326 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 CERKLQ49MI3 558 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 BMP2KLQ5H9B9 411 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 OPTNQ96CV9 577 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 WNK4Q96J92 1243 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 SCAF8Q9UPN6 1271 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 ZMYM6O95789 1325 aa12.25□□□□□ -0.45
TRAFD1-208ENST00000552890 USP17L5A8MUK1 530 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 PHF20L1A8MW92 1017 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 C19orf81C9J6K1 198 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 CTCFP49711 727 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 C12orf60Q5U649 245 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 TATDN1Q6P1N9 297 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 ZFPM1Q8IX07 1006 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 ELP3Q9H9T3 547 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 WBP1LQ9NX94 342 aa12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 SAP30BPQ9UHR5 308 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-208ENST00000552890 FOCADQ5VW36 1801 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 SSC5DA1L4H1 1573 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 CCDC171Q6TFL3 1326 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 GSG1L2A8MUP6 293 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 USP17L12C9JPN9 530 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 USP17L21D6R901 530 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 PTPRAP18433 802 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 USP14P54578 494 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 HTRA3P83110 453 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 KIF23Q02241 960 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 NOM1Q5C9Z4 860 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 IFNL3Q8IZI9 196 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 SDR42E1Q8WUS8 393 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 WDR18Q9BV38 432 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 RNF41Q9H4P4 317 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 KCNH4Q9UQ05 1017 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 SLC45A1Q9Y2W3 748 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 SNCAIPQ9Y6H5 919 aa12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 MYO5AQ9Y4I1 1855 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-208ENST00000552890 MYH1P12882 1939 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 INPP5BP32019 993 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 ABCB5Q2M3G0 1257 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 DLK2Q6UY11 383 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 C16orf86Q6ZW13 317 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 MOB2Q70IA6 237 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 ZNF444Q8N0Y2 327 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 ZNF280CQ8ND82 737 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 ZKSCAN4Q969J2 545 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 DSCC1Q9BVC3 393 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 CFHR5Q9BXR6 569 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 PNMA3Q9UL41 463 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 SYNPO2Q9UMS6 1093 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms