RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 HDAC5Q9UQL6 1122 aa20.95■□□□□ 0.94
CACNB3-222ENST00000552465 SLFN5Q08AF3 891 aa20.94■□□□□ 0.94
CACNB3-222ENST00000552465 PABPC4Q13310 644 aaKnown RBP eCLIP20.94■□□□□ 0.94
CACNB3-222ENST00000552465 XAGE2Q96GT9 111 aa20.94■□□□□ 0.94
CACNB3-222ENST00000552465 TBC1D2Q9BYX2 928 aa20.94■□□□□ 0.94
CACNB3-222ENST00000552465 NBPF3Q9H094 633 aa20.94■□□□□ 0.94
CACNB3-222ENST00000552465 HMX1Q9NP08 348 aaPredicted RBP20.94■□□□□ 0.94
CACNB3-222ENST00000552465 SMC4Q9NTJ3 1288 aa20.94■□□□□ 0.94
CACNB3-222ENST00000552465 ZMYND8Q9ULU4 1186 aaPredicted RBP20.94■□□□□ 0.94
CACNB3-222ENST00000552465 RPTORQ8N122 1335 aa20.94■□□□□ 0.94
CACNB3-222ENST00000552465 DOCK1Q14185 1865 aa20.94■□□□□ 0.94
CACNB3-222ENST00000552465 MYH2Q9UKX2 1941 aa20.94■□□□□ 0.94
CACNB3-222ENST00000552465 PHIPQ8WWQ0 1821 aa20.93■□□□□ 0.94
CACNB3-222ENST00000552465 MAP4K4O95819 1239 aaPredicted RBP20.93■□□□□ 0.94
CACNB3-222ENST00000552465 CAP2P40123 477 aa20.93■□□□□ 0.94
CACNB3-222ENST00000552465 MNX1P50219 401 aaPredicted RBP20.93■□□□□ 0.94
CACNB3-222ENST00000552465 HMGCS2P54868 508 aa20.93■□□□□ 0.94
CACNB3-222ENST00000552465 TRIM32Q13049 653 aa20.93■□□□□ 0.94
CACNB3-222ENST00000552465 GPR153Q6NV75 609 aa20.93■□□□□ 0.94
CACNB3-222ENST00000552465 ASCC2Q9H1I8 757 aaPredicted RBP20.93■□□□□ 0.94
CACNB3-222ENST00000552465 PTPRFP10586 1907 aa20.92■□□□□ 0.94
CACNB3-222ENST00000552465 A0A1B0GUL7 405 aa20.92■□□□□ 0.94
CACNB3-222ENST00000552465 LDHCP07864 332 aa20.92■□□□□ 0.94
CACNB3-222ENST00000552465 RRP1BQ14684 758 aaKnown RBP20.92■□□□□ 0.94
CACNB3-222ENST00000552465 MVPQ14764 893 aaKnown RBP20.92■□□□□ 0.94
CACNB3-222ENST00000552465 SH3D19Q5HYK7 790 aa20.92■□□□□ 0.94
CACNB3-222ENST00000552465 AKAP2Q9Y2D5 859 aa20.92■□□□□ 0.94
CACNB3-222ENST00000552465 USP17L5A8MUK1 530 aa20.91■□□□□ 0.94
CACNB3-222ENST00000552465 GSTO1P78417 241 aa20.91■□□□□ 0.94
CACNB3-222ENST00000552465 TFCP2Q12800 502 aa20.91■□□□□ 0.94
CACNB3-222ENST00000552465 C11orf49Q9H6J7 331 aa20.91■□□□□ 0.94
CACNB3-222ENST00000552465 NOB1Q9ULX3 412 aaKnown RBP20.91■□□□□ 0.94
CACNB3-222ENST00000552465 NSUN4Q96CB9 384 aaKnown RBP20.9■□□□□ 0.94
CACNB3-222ENST00000552465 HMG20BQ9P0W2 317 aa20.9■□□□□ 0.94
CACNB3-222ENST00000552465 MORF4L1Q9UBU8 362 aa20.9■□□□□ 0.94
CACNB3-222ENST00000552465 OGDHLQ9ULD0 1010 aa20.9■□□□□ 0.94
CACNB3-222ENST00000552465 DOCK3Q8IZD9 2030 aa20.89■□□□□ 0.93
CACNB3-222ENST00000552465 SYN1P17600 705 aa20.89■□□□□ 0.93
CACNB3-222ENST00000552465 TBC1D9Q6ZT07 1266 aa20.89■□□□□ 0.93
CACNB3-222ENST00000552465 DEFB123Q8N688 67 aa20.89■□□□□ 0.93
CACNB3-222ENST00000552465 TRIB2Q92519 343 aa20.89■□□□□ 0.93
CACNB3-222ENST00000552465 MEIS3Q99687 375 aa20.89■□□□□ 0.93
CACNB3-222ENST00000552465 AS3MTQ9HBK9 375 aa20.89■□□□□ 0.93
CACNB3-222ENST00000552465 COL2A1P02458 1487 aaPredicted RBP20.88■□□□□ 0.93
CACNB3-222ENST00000552465 MAGEA10P43363 369 aaPredicted RBP20.88■□□□□ 0.93
CACNB3-222ENST00000552465 LRIT3Q3SXY7 679 aa20.88■□□□□ 0.93
CACNB3-222ENST00000552465 MAP3K21Q5TCX8 1036 aa20.88■□□□□ 0.93
CACNB3-222ENST00000552465 SPATA5Q8NB90 893 aa20.88■□□□□ 0.93
CACNB3-222ENST00000552465 CDCA7LQ96GN5 454 aa20.88■□□□□ 0.93
CACNB3-222ENST00000552465 NEUROD6Q96NK8 337 aa20.88■□□□□ 0.93
CACNB3-222ENST00000552465 API5Q9BZZ5 524 aaKnown RBP20.88■□□□□ 0.93
CACNB3-222ENST00000552465 HERC5Q9UII4 1024 aaKnown RBP20.88■□□□□ 0.93
CACNB3-222ENST00000552465 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.88■□□□□ 0.93
CACNB3-222ENST00000552465 ALPK3Q96L96 1907 aa20.87■□□□□ 0.93
CACNB3-222ENST00000552465 CYP2B6P20813 491 aa20.87■□□□□ 0.93
CACNB3-222ENST00000552465 PI16Q6UXB8 463 aa20.87■□□□□ 0.93
CACNB3-222ENST00000552465 P2RX7Q99572 595 aaKnown RBP20.87■□□□□ 0.93
CACNB3-222ENST00000552465 WDR18Q9BV38 432 aa20.87■□□□□ 0.93
CACNB3-222ENST00000552465 RAI14Q9P0K7 980 aa20.87■□□□□ 0.93
CACNB3-222ENST00000552465 SRGAP3O43295 1099 aa20.86■□□□□ 0.93
CACNB3-222ENST00000552465 HOXA7P31268 230 aaPredicted RBP20.86■□□□□ 0.93
CACNB3-222ENST00000552465 BACE1P56817 501 aa20.86■□□□□ 0.93
CACNB3-222ENST00000552465 IRX3P78415 501 aaPredicted RBP20.86■□□□□ 0.93
CACNB3-222ENST00000552465 Q7L0L9 218 aa20.86■□□□□ 0.93
CACNB3-222ENST00000552465 TEX11Q8IYF3 940 aa20.86■□□□□ 0.93
CACNB3-222ENST00000552465 TDHQ8IZJ6 230 aa20.86■□□□□ 0.93
CACNB3-222ENST00000552465 PI4KBQ9UBF8 816 aa20.86■□□□□ 0.93
CACNB3-222ENST00000552465 LOC285556D6RIA3 1793 aa20.85■□□□□ 0.93
CACNB3-222ENST00000552465 PEX10O60683 326 aa20.85■□□□□ 0.93
CACNB3-222ENST00000552465 XRCC5P13010 732 aaKnown RBP20.85■□□□□ 0.93
CACNB3-222ENST00000552465 PRKAR2AP13861 404 aaKnown RBP20.85■□□□□ 0.93
CACNB3-222ENST00000552465 MTMR2Q13614 643 aa20.85■□□□□ 0.93
CACNB3-222ENST00000552465 GORABQ5T7V8 394 aa20.85■□□□□ 0.93
CACNB3-222ENST00000552465 GPRC5AQ8NFJ5 357 aa20.85■□□□□ 0.93
CACNB3-222ENST00000552465 NUDT12Q9BQG2 462 aa20.85■□□□□ 0.93
CACNB3-222ENST00000552465 TXNRD2Q9NNW7 524 aa20.85■□□□□ 0.93
CACNB3-222ENST00000552465 TMOD4Q9NZQ9 345 aa20.85■□□□□ 0.93
CACNB3-222ENST00000552465 ARID4AP29374 1257 aaPredicted RBP20.84■□□□□ 0.93
CACNB3-222ENST00000552465 MTX1Q13505 466 aa20.84■□□□□ 0.93
CACNB3-222ENST00000552465 TRMT2AQ8IZ69 625 aaKnown RBP20.84■□□□□ 0.93
CACNB3-222ENST00000552465 SH3RF3Q8TEJ3 882 aaPredicted RBP20.84■□□□□ 0.93
CACNB3-222ENST00000552465 UBE2OQ9C0C9 1292 aaKnown RBP20.84■□□□□ 0.93
CACNB3-222ENST00000552465 STXBP5LQ9Y2K9 1186 aa20.84■□□□□ 0.93
CACNB3-222ENST00000552465 PFASO15067 1338 aa20.83■□□□□ 0.93
CACNB3-222ENST00000552465 ZNF316A6NFI3 1004 aaPredicted RBP20.83■□□□□ 0.93
CACNB3-222ENST00000552465 ASNSP08243 561 aa20.83■□□□□ 0.93
CACNB3-222ENST00000552465 CT47B1P0C2W7 299 aaPredicted RBP20.83■□□□□ 0.93
CACNB3-222ENST00000552465 HERVK_113P62684 666 aa20.83■□□□□ 0.93
CACNB3-222ENST00000552465 JAG1P78504 1218 aa20.83■□□□□ 0.93
CACNB3-222ENST00000552465 TRMT44Q8IYL2 757 aaKnown RBP20.83■□□□□ 0.93
CACNB3-222ENST00000552465 SOCS4Q8WXH5 440 aa20.83■□□□□ 0.93
CACNB3-222ENST00000552465 DHX36Q9H2U1 1008 aaKnown RBP20.83■□□□□ 0.93
CACNB3-222ENST00000552465 MTMR10Q9NXD2 777 aa20.83■□□□□ 0.93
CACNB3-222ENST00000552465 LRP2BPQ9P2M1 347 aa20.83■□□□□ 0.93
CACNB3-222ENST00000552465 RBPJLQ9UBG7 517 aa20.83■□□□□ 0.93
CACNB3-222ENST00000552465 C19orf81C9J6K1 198 aa20.82■□□□□ 0.92
CACNB3-222ENST00000552465 GNAI3P08754 354 aa20.82■□□□□ 0.92
CACNB3-222ENST00000552465 COL6A1P12109 1028 aa20.82■□□□□ 0.92
CACNB3-222ENST00000552465 CACNB2Q08289 660 aaPredicted RBP20.82■□□□□ 0.92
CACNB3-222ENST00000552465 USP6NLQ92738 828 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms