RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 MMP1P03956 469 aa14.99□□□□□ -0.01
CACNB3-219ENST00000551544 SYT10Q6XYQ8 523 aa14.99□□□□□ -0.01
CACNB3-219ENST00000551544 UTP14AQ9BVJ6 771 aaKnown RBP14.99□□□□□ -0.01
CACNB3-219ENST00000551544 FANCLQ9NW38 375 aa14.99□□□□□ -0.01
CACNB3-219ENST00000551544 FAM237AA0A1B0GTK4 181 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 NPHP1O15259 732 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 TOB1P50616 345 aaPredicted RBP14.98□□□□□ -0.01
CACNB3-219ENST00000551544 GOLGA8FQ08AF8 430 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 GOLGA8DPQ0D2H9 430 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 NUP98P52948 1817 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 KIF2AO00139 706 aaPredicted RBP14.98□□□□□ -0.01
CACNB3-219ENST00000551544 NR5A1Q13285 461 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 MINDY4BA8MYZ0 360 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 IGHMBP2P38935 993 aaKnown RBP14.98□□□□□ -0.01
CACNB3-219ENST00000551544 PDE4BQ07343 736 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 HOMER1Q86YM7 354 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 STAG1Q8WVM7 1258 aa14.98□□□□□ -0.01
CACNB3-219ENST00000551544 PSDA5PKW4 1024 aaPredicted RBP14.97□□□□□ -0.01
CACNB3-219ENST00000551544 TMEM232C9JQI7 657 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 CBFA2T2O43439 604 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 GNAT2P19087 354 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 PDILTQ8N807 584 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 ABCF2Q9UG63 623 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 SLIT2O94813 1529 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 ANKRD36CQ5JPF3 1778 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 POLR2DO15514 142 aaKnown RBP14.97□□□□□ -0.01
CACNB3-219ENST00000551544 SLU7O95391 586 aaKnown RBP14.97□□□□□ -0.01
CACNB3-219ENST00000551544 BMP6P22004 513 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 EIF5P55010 431 aaKnown RBP14.97□□□□□ -0.01
CACNB3-219ENST00000551544 GABPB1Q06547 395 aaPredicted RBP14.97□□□□□ -0.01
CACNB3-219ENST00000551544 ELF2Q15723 593 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 CCDC152Q4G0S7 254 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 SDR42E1Q8WUS8 393 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 ERO1AQ96HE7 468 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 PCDHB6Q9Y5E3 794 aa14.97□□□□□ -0.01
CACNB3-219ENST00000551544 CYP7A1P22680 504 aa14.96□□□□□ -0.01
CACNB3-219ENST00000551544 CRACR2BQ8N4Y2 399 aaPredicted RBP14.96□□□□□ -0.01
CACNB3-219ENST00000551544 OXER1Q8TDS5 423 aa14.96□□□□□ -0.01
CACNB3-219ENST00000551544 AK7Q96M32 723 aa14.96□□□□□ -0.01
CACNB3-219ENST00000551544 UBAC1Q9BSL1 405 aa14.96□□□□□ -0.01
CACNB3-219ENST00000551544 SMIM22K7EJ46 135 aa14.96□□□□□ -0.02
CACNB3-219ENST00000551544 PRR29P0C7W0 189 aa14.96□□□□□ -0.02
CACNB3-219ENST00000551544 TOP1P11387 765 aaKnown RBP14.96□□□□□ -0.02
CACNB3-219ENST00000551544 DHX8Q14562 1220 aaKnown RBP14.96□□□□□ -0.02
CACNB3-219ENST00000551544 GRAMD1CQ8IYS0 662 aa14.96□□□□□ -0.02
CACNB3-219ENST00000551544 ZNF654Q8IZM8 581 aa14.96□□□□□ -0.02
CACNB3-219ENST00000551544 FANCBQ8NB91 859 aa14.96□□□□□ -0.02
CACNB3-219ENST00000551544 ACSBG1Q96GR2 724 aa14.96□□□□□ -0.02
CACNB3-219ENST00000551544 SERTAD1Q9UHV2 236 aa14.96□□□□□ -0.02
CACNB3-219ENST00000551544 HOOK1Q9UJC3 728 aaKnown RBP14.96□□□□□ -0.02
CACNB3-219ENST00000551544 DDX41Q9UJV9 622 aaKnown RBP14.96□□□□□ -0.02
CACNB3-219ENST00000551544 FBXO2Q9UK22 296 aaPredicted RBP14.96□□□□□ -0.02
CACNB3-219ENST00000551544 PNPLA7Q6ZV29 1317 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 DEXIO95424 95 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 ATP6V1AP38606 617 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 CHRNDQ07001 517 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 PPARAQ07869 468 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 POSTNQ15063 836 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 ZNF827Q17R98 1081 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 RILPL1Q5EBL4 403 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 TAF3Q5VWG9 929 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 INTS5Q6P9B9 1019 aaKnown RBP14.95□□□□□ -0.02
CACNB3-219ENST00000551544 CCDC87Q9NVE4 849 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 MAN1B1Q9UKM7 699 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 NIP7Q9Y221 180 aaKnown RBP eCLIP14.95□□□□□ -0.02
CACNB3-219ENST00000551544 ECM29Q5VYK3 1845 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 CCDC196A0A1B0GTZ2 297 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 PTPREP23469 700 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 CRKLP46109 303 aaKnown RBP14.95□□□□□ -0.02
CACNB3-219ENST00000551544 MDM2Q00987 491 aaPredicted RBP14.95□□□□□ -0.02
CACNB3-219ENST00000551544 ADGRA1Q86SQ6 560 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 VSTM4Q8IW00 320 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 FOXP1Q9H334 677 aaPredicted RBP14.95□□□□□ -0.02
CACNB3-219ENST00000551544 RNF41Q9H4P4 317 aaPredicted RBP14.95□□□□□ -0.02
CACNB3-219ENST00000551544 CABP5Q9NP86 173 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 RAI14Q9P0K7 980 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 DISP2A7MBM2 1401 aa14.95□□□□□ -0.02
CACNB3-219ENST00000551544 KMT5BQ4FZB7 885 aa14.94□□□□□ -0.02
CACNB3-219ENST00000551544 hCG_1642624A0A1W2PR95 340 aa14.94□□□□□ -0.02
CACNB3-219ENST00000551544 TRMT44Q8IYL2 757 aaKnown RBP14.94□□□□□ -0.02
CACNB3-219ENST00000551544 TMTC2Q8N394 836 aa14.94□□□□□ -0.02
CACNB3-219ENST00000551544 MORC2Q9Y6X9 1032 aaPredicted RBP14.94□□□□□ -0.02
CACNB3-219ENST00000551544 CDK11BP21127 795 aaKnown RBP14.93□□□□□ -0.02
CACNB3-219ENST00000551544 KCNJ6P48051 423 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 USP49Q70CQ1 688 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 ZNF397Q8NF99 534 aaPredicted RBP14.93□□□□□ -0.02
CACNB3-219ENST00000551544 SMARCE1Q969G3 411 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 DNAI1Q9UI46 699 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 LRP5O75197 1615 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 TNKSO95271 1327 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 WTIPA6NIX2 430 aaPredicted RBP14.93□□□□□ -0.02
CACNB3-219ENST00000551544 GYG1P46976 350 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 AKAP17AQ02040 695 aaKnown RBP14.93□□□□□ -0.02
CACNB3-219ENST00000551544 FMR1Q06787 632 aaKnown RBP eCLIP14.93□□□□□ -0.02
CACNB3-219ENST00000551544 INTS13Q9NVM9 706 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 FAM205CA6NFA0 338 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 CAMTA2O94983 1202 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 FBXO38Q6PIJ6 1188 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 LRRN4CLQ8ND94 238 aa14.93□□□□□ -0.02
CACNB3-219ENST00000551544 VPS54Q9P1Q0 977 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms