RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 WRNIP1Q96S55 665 aa18.2■□□□□ 0.5
SMARCD1-211ENST00000551497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMARCD1-211ENST00000551497 ATP8A2Q9NTI2 1148 aa18.2■□□□□ 0.5
SMARCD1-211ENST00000551497 WDR33Q9C0J8 1336 aaKnown RBP18.2■□□□□ 0.5
SMARCD1-211ENST00000551497 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
SMARCD1-211ENST00000551497 FAM155AB1AL88 458 aaPredicted RBP18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 PATL2C9JE40 543 aaKnown RBP18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 USP17L12C9JPN9 530 aa18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 USP17L21D6R901 530 aa18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 AOC2O75106 756 aa18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 APPP05067 770 aa18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 VGLL4Q14135 290 aa18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 RRP1BQ14684 758 aaKnown RBP18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 ZIC5Q96T25 663 aa18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 ELP3Q9H9T3 547 aa18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 DIAPH3Q9NSV4 1193 aa18.19■□□□□ 0.5
SMARCD1-211ENST00000551497 BAZ2AQ9UIF9 1905 aaKnown RBP18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 FOXP2O15409 715 aa18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 MKRN3Q13064 507 aaKnown RBP18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 CTR9Q6PD62 1173 aa18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 ZNF589Q86UQ0 364 aaPredicted RBP18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 DNAJC18Q9H819 358 aa18.18■□□□□ 0.5
SMARCD1-211ENST00000551497 GNAT2P19087 354 aa18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 CHMLP26374 656 aa18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 ECE1P42892 770 aa18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 RASAL3Q86YV0 1011 aa18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 IFNL3Q8IZI9 196 aa18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 CRACR2BQ8N4Y2 399 aaPredicted RBP18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 DYNLL2Q96FJ2 89 aa18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 EPB41L4AQ9HCS5 686 aaPredicted RBP18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 SNCAIPQ9Y6H5 919 aa18.17■□□□□ 0.5
SMARCD1-211ENST00000551497 SIPA1L1O43166 1804 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 UNCXA6NJT0 531 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 HIP1O00291 1037 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 SLC10A3P09131 477 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 GJA5P36382 358 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 JAG1P78504 1218 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 C12orf60Q5U649 245 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 DDRGK1Q96HY6 314 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 IL25Q9H293 177 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 HERC5Q9UII4 1024 aaKnown RBP18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 SERPINB13Q9UIV8 391 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 CSADQ9Y600 493 aa18.16■□□□□ 0.5
SMARCD1-211ENST00000551497 BMP2KLQ5H9B9 411 aa18.15■□□□□ 0.5
SMARCD1-211ENST00000551497 SPRYD7Q5W111 196 aa18.15■□□□□ 0.5
SMARCD1-211ENST00000551497 GIMAP6Q6P9H5 292 aa18.15■□□□□ 0.5
SMARCD1-211ENST00000551497 TRIM34Q9BYJ4 488 aa18.15■□□□□ 0.5
SMARCD1-211ENST00000551497 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.15■□□□□ 0.5
SMARCD1-211ENST00000551497 NAV1Q8NEY1 1877 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 OTOFQ9HC10 1997 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 MINDY4BA8MYZ0 360 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 CTNND1O60716 968 aaKnown RBP18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 TDO2P48775 406 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 GABPAQ06546 454 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 SHROOM1Q2M3G4 852 aaPredicted RBP18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 STK11IPQ8N1F8 1099 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 JMYQ8N9B5 988 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 SLC44A5Q8NCS7 719 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 OPTNQ96CV9 577 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 WNK4Q96J92 1243 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 EHD4Q9H223 541 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
SMARCD1-211ENST00000551497 HSPD1P10809 573 aaKnown RBP18.13■□□□□ 0.49
SMARCD1-211ENST00000551497 CAP2P40123 477 aa18.13■□□□□ 0.49
SMARCD1-211ENST00000551497 SBK1Q52WX2 424 aa18.13■□□□□ 0.49
SMARCD1-211ENST00000551497 NOL9Q5SY16 702 aaKnown RBP18.13■□□□□ 0.49
SMARCD1-211ENST00000551497 CCDC84Q86UT8 332 aaPredicted RBP18.13■□□□□ 0.49
SMARCD1-211ENST00000551497 SCYL3Q8IZE3 742 aa18.13■□□□□ 0.49
SMARCD1-211ENST00000551497 NACAP1Q9BZK3 213 aa18.13■□□□□ 0.49
SMARCD1-211ENST00000551497 DDX60LQ5H9U9 1706 aaKnown RBP18.12■□□□□ 0.49
SMARCD1-211ENST00000551497 SHMT1P34896 483 aa18.12■□□□□ 0.49
SMARCD1-211ENST00000551497 NOGQ13253 232 aa18.12■□□□□ 0.49
SMARCD1-211ENST00000551497 TATDN1Q6P1N9 297 aa18.12■□□□□ 0.49
SMARCD1-211ENST00000551497 ERO1BQ86YB8 467 aa18.12■□□□□ 0.49
SMARCD1-211ENST00000551497 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
SMARCD1-211ENST00000551497 NAPBQ9H115 298 aa18.12■□□□□ 0.49
SMARCD1-211ENST00000551497 SPDYE5A6NIY4 337 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 GDF11O95390 407 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 FGAP02671 866 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 PTPRAP18433 802 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 MAP2K2P36507 400 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 CDK8P49336 464 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 ALX1Q15699 326 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 AMOTL1Q8IY63 956 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 PICK1Q9NRD5 415 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 ARPP21Q9UBL0 812 aaPredicted RBP18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 ZHX2Q9Y6X8 837 aa18.11■□□□□ 0.49
SMARCD1-211ENST00000551497 CERKLQ49MI3 558 aaPredicted RBP18.1■□□□□ 0.49
SMARCD1-211ENST00000551497 COL13A1Q5TAT6 717 aaPredicted RBP18.1■□□□□ 0.49
SMARCD1-211ENST00000551497 IRF6O14896 467 aa18.09■□□□□ 0.49
SMARCD1-211ENST00000551497 MFAP1P55081 439 aaKnown RBP18.09■□□□□ 0.49
SMARCD1-211ENST00000551497 PPATQ06203 517 aa18.09■□□□□ 0.49
SMARCD1-211ENST00000551497 C16orf86Q6ZW13 317 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms