RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 PLCD1P51178 756 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 CHMP4BP1P59074 171 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 LONRF2Q1L5Z9 754 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 SRGAP1Q7Z6B7 1085 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 EXOC4Q96A65 974 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 SERTAD1Q9UHV2 236 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 FBXO2Q9UK22 296 aaPredicted RBP17.16■□□□□ 0.34
PDE1B-207ENST00000550620 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
PDE1B-207ENST00000550620 C1orf167Q5SNV9 1468 aa17.16■□□□□ 0.34
PDE1B-207ENST00000550620 A0A1B0GTH6 734 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 KIF5CO60282 957 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 MCAMP43121 646 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 ST5P78524 1137 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 KARSQ15046 597 aaKnown RBP17.15■□□□□ 0.34
PDE1B-207ENST00000550620 PI16Q6UXB8 463 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 TRIM22Q8IYM9 498 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
PDE1B-207ENST00000550620 FOXP1Q9H334 677 aaPredicted RBP17.15■□□□□ 0.34
PDE1B-207ENST00000550620 TBC1D2BQ9UPU7 963 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 IFNAR1P17181 557 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
PDE1B-207ENST00000550620 RAD51AP2Q09MP3 1159 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 METTL24Q5JXM2 366 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 PPFIBP1Q86W92 1011 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 DIS3L2Q8IYB7 885 aaKnown RBP17.15■□□□□ 0.34
PDE1B-207ENST00000550620 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
PDE1B-207ENST00000550620 DENND2AQ9ULE3 1009 aa17.15■□□□□ 0.34
PDE1B-207ENST00000550620 ERLIN1O75477 346 aa17.14■□□□□ 0.33
PDE1B-207ENST00000550620 PCCAP05165 728 aaPredicted RBP17.14■□□□□ 0.33
PDE1B-207ENST00000550620 PRR29P0C7W0 189 aa17.14■□□□□ 0.33
PDE1B-207ENST00000550620 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
PDE1B-207ENST00000550620 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
PDE1B-207ENST00000550620 NID2Q14112 1375 aa17.14■□□□□ 0.33
PDE1B-207ENST00000550620 CSF1RP07333 972 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 MRPL44Q9H9J2 332 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 SENP2Q9HC62 589 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 ZCCHC17Q9NP64 241 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 SAMSN1Q9NSI8 373 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 CDC23Q9UJX2 597 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 BTBD18B2RXH4 712 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 MAP2K7O14733 419 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 EIF3JO75822 258 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 IDH1O75874 414 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 ALX1Q15699 326 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 MSL3Q8N5Y2 521 aaKnown RBP17.13■□□□□ 0.33
PDE1B-207ENST00000550620 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 ZNF532Q9HCE3 1301 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
PDE1B-207ENST00000550620 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
PDE1B-207ENST00000550620 ZSCAN26Q16670 478 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 ZNF827Q17R98 1081 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 FILIP1LQ4L180 1135 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 GOLGA5Q8TBA6 731 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 AIDAQ96BJ3 306 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 MYL10Q9BUA6 226 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 ADGRG1Q9Y653 693 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 SOWAHDA6NJG2 315 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 ACTN4O43707 911 aaKnown RBP17.12■□□□□ 0.33
PDE1B-207ENST00000550620 CAPN2P17655 700 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 USP5P45974 858 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 HDXQ7Z353 690 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 CCDC51Q96ER9 411 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 KRT23Q9C075 422 aa17.12■□□□□ 0.33
PDE1B-207ENST00000550620 SEMA3EO15041 775 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 DEXIO95424 95 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 ZBTB38Q8NAP3 1195 aaPredicted RBP17.11■□□□□ 0.33
PDE1B-207ENST00000550620 NKX2-3Q8TAU0 364 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
PDE1B-207ENST00000550620 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
PDE1B-207ENST00000550620 LZTFL1Q9NQ48 299 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 ADAM21Q9UKJ8 722 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 TUBBP07437 444 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 PDE6AP16499 860 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 GRIN1Q05586 938 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 MTF1Q14872 753 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 SART3Q15020 963 aaKnown RBP17.11■□□□□ 0.33
PDE1B-207ENST00000550620 RTN1Q16799 776 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 LDHAL6AQ6ZMR3 332 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 CNGA4Q8IV77 575 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 MSANTD4Q8NCY6 345 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 GBP3Q9H0R5 595 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 NAPBQ9H115 298 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
PDE1B-207ENST00000550620 RAB21Q9UL25 225 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms