RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 DOCK1Q14185 1865 aa23.26■■□□□ 1.31
DDX54-207ENST00000550016 M0R2C6 588 aa23.26■■□□□ 1.31
DDX54-207ENST00000550016 SLURP2P0DP57 97 aa23.26■■□□□ 1.31
DDX54-207ENST00000550016 INPP5BP32019 993 aa23.26■■□□□ 1.31
DDX54-207ENST00000550016 SPRYD7Q5W111 196 aa23.26■■□□□ 1.31
DDX54-207ENST00000550016 TTC6Q86TZ1 520 aa23.26■■□□□ 1.31
DDX54-207ENST00000550016 METTL16Q86W50 562 aaKnown RBP23.26■■□□□ 1.31
DDX54-207ENST00000550016 ELP3Q9H9T3 547 aa23.26■■□□□ 1.31
DDX54-207ENST00000550016 PPP4R2Q9NY27 417 aa23.26■■□□□ 1.31
DDX54-207ENST00000550016 MYH8P13535 1937 aa23.25■■□□□ 1.31
DDX54-207ENST00000550016 GPAA1O43292 621 aa23.25■■□□□ 1.31
DDX54-207ENST00000550016 DDRGK1Q96HY6 314 aa23.25■■□□□ 1.31
DDX54-207ENST00000550016 WNK4Q96J92 1243 aa23.25■■□□□ 1.31
DDX54-207ENST00000550016 SEC62Q99442 399 aaKnown RBP23.25■■□□□ 1.31
DDX54-207ENST00000550016 MCM9Q9NXL9 1143 aa23.25■■□□□ 1.31
DDX54-207ENST00000550016 SNCAIPQ9Y6H5 919 aa23.25■■□□□ 1.31
DDX54-207ENST00000550016 FAM196BA6NMK8 535 aa23.24■■□□□ 1.31
DDX54-207ENST00000550016 POLR3DP05423 398 aaPredicted RBP23.24■■□□□ 1.31
DDX54-207ENST00000550016 GNAT2P19087 354 aa23.24■■□□□ 1.31
DDX54-207ENST00000550016 KIF23Q02241 960 aaPredicted RBP23.24■■□□□ 1.31
DDX54-207ENST00000550016 SLC4A8Q2Y0W8 1093 aa23.24■■□□□ 1.31
DDX54-207ENST00000550016 NOL9Q5SY16 702 aaKnown RBP23.24■■□□□ 1.31
DDX54-207ENST00000550016 CRACR2BQ8N4Y2 399 aaPredicted RBP23.24■■□□□ 1.31
DDX54-207ENST00000550016 ZIC5Q96T25 663 aa23.24■■□□□ 1.31
DDX54-207ENST00000550016 TRIM34Q9BYJ4 488 aa23.24■■□□□ 1.31
DDX54-207ENST00000550016 HELLSQ9NRZ9 838 aa23.24■■□□□ 1.31
DDX54-207ENST00000550016 CTNND1O60716 968 aaKnown RBP23.23■■□□□ 1.31
DDX54-207ENST00000550016 ZBTB48P10074 688 aaPredicted RBP23.23■■□□□ 1.31
DDX54-207ENST00000550016 MAP2K1Q02750 393 aaPredicted RBP23.23■■□□□ 1.31
DDX54-207ENST00000550016 OPTNQ96CV9 577 aa23.23■■□□□ 1.31
DDX54-207ENST00000550016 EHD4Q9H223 541 aa23.23■■□□□ 1.31
DDX54-207ENST00000550016 GSG1L2A8MUP6 293 aa23.22■■□□□ 1.31
DDX54-207ENST00000550016 GSPT1P15170 499 aaKnown RBP23.22■■□□□ 1.31
DDX54-207ENST00000550016 SDSP20132 328 aa23.22■■□□□ 1.31
DDX54-207ENST00000550016 PLCD1P51178 756 aa23.22■■□□□ 1.31
DDX54-207ENST00000550016 MKRN3Q13064 507 aaKnown RBP23.22■■□□□ 1.31
DDX54-207ENST00000550016 GIMAP6Q6P9H5 292 aa23.22■■□□□ 1.31
DDX54-207ENST00000550016 ERO1BQ86YB8 467 aa23.22■■□□□ 1.31
DDX54-207ENST00000550016 REM2Q8IYK8 340 aaPredicted RBP23.22■■□□□ 1.31
DDX54-207ENST00000550016 SERPINB13Q9UIV8 391 aa23.22■■□□□ 1.31
DDX54-207ENST00000550016 PHIPQ8WWQ0 1821 aa23.22■■□□□ 1.31
DDX54-207ENST00000550016 SPDYE5A6NIY4 337 aa23.21■■□□□ 1.31
DDX54-207ENST00000550016 GJA5P36382 358 aa23.21■■□□□ 1.31
DDX54-207ENST00000550016 MCMDC2Q4G0Z9 681 aa23.21■■□□□ 1.31
DDX54-207ENST00000550016 FAM227BQ96M60 508 aa23.21■■□□□ 1.31
DDX54-207ENST00000550016 PATL2C9JE40 543 aaKnown RBP23.2■■□□□ 1.3
DDX54-207ENST00000550016 USP17L12C9JPN9 530 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 USP17L21D6R901 530 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 HIP1O00291 1037 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 NMIQ13287 307 aaPredicted RBP23.2■■□□□ 1.3
DDX54-207ENST00000550016 AMOTL1Q8IY63 956 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 SCYL3Q8IZE3 742 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 CNKSR2Q8WXI2 1034 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 OTUD5Q96G74 571 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 DNAJC18Q9H819 358 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 PICK1Q9NRD5 415 aa23.2■■□□□ 1.3
DDX54-207ENST00000550016 A0A0D9SFI3 127 aa23.19■■□□□ 1.3
DDX54-207ENST00000550016 APPP05067 770 aa23.19■■□□□ 1.3
DDX54-207ENST00000550016 CYP2D6P10635 497 aa23.19■■□□□ 1.3
DDX54-207ENST00000550016 CAP2P40123 477 aa23.19■■□□□ 1.3
DDX54-207ENST00000550016 PPATQ06203 517 aa23.19■■□□□ 1.3
DDX54-207ENST00000550016 DIAPH3Q9NSV4 1193 aa23.19■■□□□ 1.3
DDX54-207ENST00000550016 WBP1LQ9NX94 342 aa23.19■■□□□ 1.3
DDX54-207ENST00000550016 MANSC4A6NHS7 340 aaPredicted RBP23.18■■□□□ 1.3
DDX54-207ENST00000550016 PPIL2Q13356 520 aa23.18■■□□□ 1.3
DDX54-207ENST00000550016 RRP1BQ14684 758 aaKnown RBP23.18■■□□□ 1.3
DDX54-207ENST00000550016 C12orf60Q5U649 245 aa23.18■■□□□ 1.3
DDX54-207ENST00000550016 CTR9Q6PD62 1173 aa23.18■■□□□ 1.3
DDX54-207ENST00000550016 CCDC129Q6ZRS4 1044 aa23.18■■□□□ 1.3
DDX54-207ENST00000550016 NACAP1Q9BZK3 213 aa23.18■■□□□ 1.3
DDX54-207ENST00000550016 TAOK2Q9UL54 1235 aa23.18■■□□□ 1.3
DDX54-207ENST00000550016 TM4SF4P48230 202 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 INHBEP58166 350 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 GABPAQ06546 454 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 SREBF2Q12772 1141 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 SBK1Q52WX2 424 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 TATDN1Q6P1N9 297 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 SKAP1Q86WV1 359 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 IFNL3Q8IZI9 196 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 ARPP21Q9UBL0 812 aaPredicted RBP23.17■■□□□ 1.3
DDX54-207ENST00000550016 PTPRFP10586 1907 aa23.17■■□□□ 1.3
DDX54-207ENST00000550016 CYP2D7A0A087X1C5 515 aa23.16■■□□□ 1.3
DDX54-207ENST00000550016 PTPRAP18433 802 aa23.16■■□□□ 1.3
DDX54-207ENST00000550016 TDO2P48775 406 aa23.16■■□□□ 1.3
DDX54-207ENST00000550016 EVX2Q03828 476 aa23.16■■□□□ 1.3
DDX54-207ENST00000550016 BEGAINQ9BUH8 593 aa23.16■■□□□ 1.3
DDX54-207ENST00000550016 EPB41L4AQ9HCS5 686 aaPredicted RBP23.16■■□□□ 1.3
DDX54-207ENST00000550016 GTF2A2P52657 109 aa23.15■■□□□ 1.3
DDX54-207ENST00000550016 MFAP1P55081 439 aaKnown RBP23.15■■□□□ 1.3
DDX54-207ENST00000550016 CWC27Q6UX04 472 aaKnown RBP23.15■■□□□ 1.3
DDX54-207ENST00000550016 GINM1Q9NU53 330 aa23.15■■□□□ 1.3
DDX54-207ENST00000550016 SWAP70Q9UH65 585 aa23.15■■□□□ 1.3
DDX54-207ENST00000550016 ZHX2Q9Y6X8 837 aa23.15■■□□□ 1.3
DDX54-207ENST00000550016 IRF6O14896 467 aa23.14■■□□□ 1.29
DDX54-207ENST00000550016 HSPA1AP0DMV8 641 aaKnown RBP23.14■■□□□ 1.29
DDX54-207ENST00000550016 HSPA1BP0DMV9 641 aaKnown RBP23.14■■□□□ 1.29
DDX54-207ENST00000550016 SHMT1P34896 483 aa23.14■■□□□ 1.29
DDX54-207ENST00000550016 CERKLQ49MI3 558 aaPredicted RBP23.14■■□□□ 1.29
DDX54-207ENST00000550016 MS4A4AQ96JQ5 239 aa23.14■■□□□ 1.29
DDX54-207ENST00000550016 PCNTO95613 3336 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms