RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 SLC45A1Q9Y2W3 748 aa29.4■■■□□ 2.3
USP44-205ENST00000549639 LACTBP83111 547 aaPredicted RBP29.39■■■□□ 2.3
USP44-205ENST00000549639 C17orf99Q6UX52 265 aa29.39■■■□□ 2.3
USP44-205ENST00000549639 FOXP4Q8IVH2 680 aaPredicted RBP29.39■■■□□ 2.3
USP44-205ENST00000549639 FLT1P17948 1338 aa29.39■■■□□ 2.3
USP44-205ENST00000549639 MYO5AQ9Y4I1 1855 aaKnown RBP29.38■■■□□ 2.29
USP44-205ENST00000549639 MAPKAPK5Q8IW41 473 aa29.38■■■□□ 2.29
USP44-205ENST00000549639 APBB1O00213 710 aa29.37■■■□□ 2.29
USP44-205ENST00000549639 SLURP2P0DP57 97 aa29.37■■■□□ 2.29
USP44-205ENST00000549639 CAP2P40123 477 aa29.37■■■□□ 2.29
USP44-205ENST00000549639 C20orf194Q5TEA3 1177 aa29.37■■■□□ 2.29
USP44-205ENST00000549639 GPAT2Q6NUI2 795 aa29.37■■■□□ 2.29
USP44-205ENST00000549639 MAGEB6Q8N7X4 407 aa29.37■■■□□ 2.29
USP44-205ENST00000549639 METTL16Q86W50 562 aaKnown RBP29.36■■■□□ 2.29
USP44-205ENST00000549639 ANTXR1Q9H6X2 564 aa29.36■■■□□ 2.29
USP44-205ENST00000549639 FOCADQ5VW36 1801 aa29.36■■■□□ 2.29
USP44-205ENST00000549639 FAM196BA6NMK8 535 aa29.35■■■□□ 2.29
USP44-205ENST00000549639 PRMT2P55345 433 aa29.35■■■□□ 2.29
USP44-205ENST00000549639 TRIM34Q9BYJ4 488 aa29.35■■■□□ 2.29
USP44-205ENST00000549639 GINM1Q9NU53 330 aa29.35■■■□□ 2.29
USP44-205ENST00000549639 ADGRA2Q96PE1 1338 aa29.35■■■□□ 2.29
USP44-205ENST00000549639 TRIM75PA6NK02 468 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 HLA-DOAP06340 250 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 DYNLL1P63167 89 aaKnown RBP29.34■■■□□ 2.29
USP44-205ENST00000549639 CAP1Q01518 475 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 GADL1Q6ZQY3 521 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 ARMC5Q96C12 935 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 CPA4Q9UI42 421 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 NDUFB9Q9Y6M9 179 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 HTTP42858 3142 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 PHIPQ8WWQ0 1821 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 CDK5RAP2Q96SN8 1893 aa29.34■■■□□ 2.29
USP44-205ENST00000549639 CRACR2BQ8N4Y2 399 aaPredicted RBP29.33■■■□□ 2.29
USP44-205ENST00000549639 AS3MTQ9HBK9 375 aa29.33■■■□□ 2.29
USP44-205ENST00000549639 USP17L5A8MUK1 530 aa29.32■■■□□ 2.28
USP44-205ENST00000549639 NBPF11Q86T75 865 aa29.32■■■□□ 2.28
USP44-205ENST00000549639 MIGA1Q8NAN2 632 aa29.32■■■□□ 2.28
USP44-205ENST00000549639 PROCA1Q8NCQ7 364 aaPredicted RBP29.32■■■□□ 2.28
USP44-205ENST00000549639 ZNF280CQ8ND82 737 aa29.32■■■□□ 2.28
USP44-205ENST00000549639 PALD1Q9ULE6 856 aa29.32■■■□□ 2.28
USP44-205ENST00000549639 ASNSP08243 561 aa29.31■■■□□ 2.28
USP44-205ENST00000549639 USP5P45974 858 aa29.31■■■□□ 2.28
USP44-205ENST00000549639 LRRCC1Q9C099 1032 aa29.31■■■□□ 2.28
USP44-205ENST00000549639 AGTPBP1Q9UPW5 1226 aa29.31■■■□□ 2.28
USP44-205ENST00000549639 PTPRFP10586 1907 aa29.31■■■□□ 2.28
USP44-205ENST00000549639 HOXD10P28358 340 aa29.3■■■□□ 2.28
USP44-205ENST00000549639 CYP2C8P10632 490 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 BCRP11274 1271 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 ATP5JP18859 108 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 SPP2Q13103 211 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 SLC9C2Q5TAH2 1124 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 DNAJC2Q99543 621 aaKnown RBP29.29■■■□□ 2.28
USP44-205ENST00000549639 ARHGAP39Q9C0H5 1083 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 PNMA3Q9UL41 463 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 PTCH2Q9Y6C5 1203 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 SIPA1L1O43166 1804 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 ATAD5Q96QE3 1844 aa29.29■■■□□ 2.28
USP44-205ENST00000549639 GOLIM4O00461 696 aa29.28■■■□□ 2.28
USP44-205ENST00000549639 PSMC4P43686 418 aa29.28■■■□□ 2.28
USP44-205ENST00000549639 PABPC4Q13310 644 aaKnown RBP eCLIP29.28■■■□□ 2.28
USP44-205ENST00000549639 RRP1BQ14684 758 aaKnown RBP29.28■■■□□ 2.28
USP44-205ENST00000549639 SLC9C1Q4G0N8 1177 aa29.28■■■□□ 2.28
USP44-205ENST00000549639 RIOK1Q9BRS2 568 aaKnown RBP29.28■■■□□ 2.28
USP44-205ENST00000549639 WDR18Q9BV38 432 aa29.28■■■□□ 2.28
USP44-205ENST00000549639 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.28■■■□□ 2.28
USP44-205ENST00000549639 SAP30BPQ9UHR5 308 aaKnown RBP29.28■■■□□ 2.28
USP44-205ENST00000549639 MAGEB6P1A0A0J9YX57 407 aa29.27■■■□□ 2.28
USP44-205ENST00000549639 PDE6AP16499 860 aa29.27■■■□□ 2.28
USP44-205ENST00000549639 SH3D19Q5HYK7 790 aa29.27■■■□□ 2.28
USP44-205ENST00000549639 TTC6Q86TZ1 520 aa29.27■■■□□ 2.28
USP44-205ENST00000549639 CCDC84Q86UT8 332 aaPredicted RBP29.27■■■□□ 2.28
USP44-205ENST00000549639 EHD4Q9H223 541 aa29.27■■■□□ 2.28
USP44-205ENST00000549639 DNAJC18Q9H819 358 aa29.27■■■□□ 2.28
USP44-205ENST00000549639 SMCR8Q8TEV9 937 aaPredicted RBP29.26■■■□□ 2.27
USP44-205ENST00000549639 PAG1Q9NWQ8 432 aa29.26■■■□□ 2.27
USP44-205ENST00000549639 FMNL1O95466 1100 aaPredicted RBP29.25■■■□□ 2.27
USP44-205ENST00000549639 ZNF333Q96JL9 665 aa29.25■■■□□ 2.27
USP44-205ENST00000549639 TRIM47Q96LD4 638 aa29.25■■■□□ 2.27
USP44-205ENST00000549639 CRNKL1Q9BZJ0 848 aaKnown RBP29.25■■■□□ 2.27
USP44-205ENST00000549639 SRRDQ9UH36 339 aa29.25■■■□□ 2.27
USP44-205ENST00000549639 MYH1P12882 1939 aa29.24■■■□□ 2.27
USP44-205ENST00000549639 FCGRTP55899 365 aa29.24■■■□□ 2.27
USP44-205ENST00000549639 HAUS7Q99871 368 aa29.24■■■□□ 2.27
USP44-205ENST00000549639 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.24■■■□□ 2.27
USP44-205ENST00000549639 BCL11AQ9H165 835 aa29.24■■■□□ 2.27
USP44-205ENST00000549639 SERPINB13Q9UIV8 391 aa29.24■■■□□ 2.27
USP44-205ENST00000549639 ZNF532Q9HCE3 1301 aa29.23■■■□□ 2.27
USP44-205ENST00000549639 C19orf81C9J6K1 198 aa29.23■■■□□ 2.27
USP44-205ENST00000549639 HMGCS2P54868 508 aa29.23■■■□□ 2.27
USP44-205ENST00000549639 TMEM106CQ9BVX2 250 aa29.23■■■□□ 2.27
USP44-205ENST00000549639 BOLA2Q9H3K6 86 aa29.23■■■□□ 2.27
USP44-205ENST00000549639 DCTPP1Q9H773 170 aa29.23■■■□□ 2.27
USP44-205ENST00000549639 LOC285556D6RIA3 1793 aa29.22■■■□□ 2.27
USP44-205ENST00000549639 BACE1P56817 501 aa29.22■■■□□ 2.27
USP44-205ENST00000549639 TREML2Q5T2D2 321 aa29.22■■■□□ 2.27
USP44-205ENST00000549639 TATDN1Q6P1N9 297 aa29.22■■■□□ 2.27
USP44-205ENST00000549639 ZBTB21Q9ULJ3 1066 aa29.22■■■□□ 2.27
USP44-205ENST00000549639 CENPFP49454 3210 aa29.22■■■□□ 2.27
USP44-205ENST00000549639 TNRC18O15417 2968 aaPredicted RBP29.22■■■□□ 2.27
USP44-205ENST00000549639 TCRBV5S4A2TA0A5A2 114 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms