RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.83■■□□□ 1.41
ATF1-202ENST00000549612 PI4KBQ9UBF8 816 aa23.83■■□□□ 1.41
ATF1-202ENST00000549612 CPA4Q9UI42 421 aa23.83■■□□□ 1.41
ATF1-202ENST00000549612 NDUFB9Q9Y6M9 179 aa23.83■■□□□ 1.41
ATF1-202ENST00000549612 CENPFP49454 3210 aa23.83■■□□□ 1.4
ATF1-202ENST00000549612 MYO5AQ9Y4I1 1855 aaKnown RBP23.83■■□□□ 1.4
ATF1-202ENST00000549612 PHIPQ8WWQ0 1821 aa23.82■■□□□ 1.4
ATF1-202ENST00000549612 GNRH1P01148 92 aa23.82■■□□□ 1.4
ATF1-202ENST00000549612 CYP7A1P22680 504 aa23.82■■□□□ 1.4
ATF1-202ENST00000549612 MAPKAPK5Q8IW41 473 aa23.82■■□□□ 1.4
ATF1-202ENST00000549612 CLASRPQ8N2M8 674 aaKnown RBP23.82■■□□□ 1.4
ATF1-202ENST00000549612 TGFBRAP1Q8WUH2 860 aa23.82■■□□□ 1.4
ATF1-202ENST00000549612 SLC45A1Q9Y2W3 748 aa23.82■■□□□ 1.4
ATF1-202ENST00000549612 CAP2P40123 477 aa23.81■■□□□ 1.4
ATF1-202ENST00000549612 METTL16Q86W50 562 aaKnown RBP23.81■■□□□ 1.4
ATF1-202ENST00000549612 CERS3Q8IU89 383 aa23.81■■□□□ 1.4
ATF1-202ENST00000549612 ANTXR1Q9H6X2 564 aa23.81■■□□□ 1.4
ATF1-202ENST00000549612 PTCH2Q9Y6C5 1203 aa23.81■■□□□ 1.4
ATF1-202ENST00000549612 FOCADQ5VW36 1801 aa23.8■■□□□ 1.4
ATF1-202ENST00000549612 TRIM75PA6NK02 468 aa23.8■■□□□ 1.4
ATF1-202ENST00000549612 RAB11FIP3O75154 756 aa23.8■■□□□ 1.4
ATF1-202ENST00000549612 DYNLL1P63167 89 aaKnown RBP23.8■■□□□ 1.4
ATF1-202ENST00000549612 MAP3K12Q12852 859 aa23.8■■□□□ 1.4
ATF1-202ENST00000549612 RRP1BQ14684 758 aaKnown RBP23.8■■□□□ 1.4
ATF1-202ENST00000549612 C20orf194Q5TEA3 1177 aa23.8■■□□□ 1.4
ATF1-202ENST00000549612 CCDC84Q86UT8 332 aaPredicted RBP23.8■■□□□ 1.4
ATF1-202ENST00000549612 TBC1D2Q9BYX2 928 aa23.8■■□□□ 1.4
ATF1-202ENST00000549612 PTPRFP10586 1907 aa23.8■■□□□ 1.4
ATF1-202ENST00000549612 SIPA1L1O43166 1804 aa23.8■■□□□ 1.4
ATF1-202ENST00000549612 PDE4DIPQ5VU43 2346 aa23.79■■□□□ 1.4
ATF1-202ENST00000549612 CDK5RAP2Q96SN8 1893 aa23.79■■□□□ 1.4
ATF1-202ENST00000549612 CYP2C8P10632 490 aa23.79■■□□□ 1.4
ATF1-202ENST00000549612 BCRP11274 1271 aa23.79■■□□□ 1.4
ATF1-202ENST00000549612 GADL1Q6ZQY3 521 aa23.79■■□□□ 1.4
ATF1-202ENST00000549612 MAGEB6Q8N7X4 407 aa23.79■■□□□ 1.4
ATF1-202ENST00000549612 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.79■■□□□ 1.4
ATF1-202ENST00000549612 ZSWIM8A7E2V4 1837 aa23.78■■□□□ 1.4
ATF1-202ENST00000549612 APBB1O00213 710 aa23.78■■□□□ 1.4
ATF1-202ENST00000549612 PRMT2P55345 433 aa23.78■■□□□ 1.4
ATF1-202ENST00000549612 DNAJC18Q9H819 358 aa23.78■■□□□ 1.4
ATF1-202ENST00000549612 IFIT2P09913 472 aaKnown RBP23.77■■□□□ 1.4
ATF1-202ENST00000549612 CTGFP29279 349 aa23.77■■□□□ 1.4
ATF1-202ENST00000549612 TTF1Q15361 905 aaPredicted RBP23.77■■□□□ 1.4
ATF1-202ENST00000549612 FOXP4Q8IVH2 680 aaPredicted RBP23.77■■□□□ 1.4
ATF1-202ENST00000549612 MIGA1Q8NAN2 632 aa23.77■■□□□ 1.4
ATF1-202ENST00000549612 ZNF280CQ8ND82 737 aa23.77■■□□□ 1.4
ATF1-202ENST00000549612 ZNF333Q96JL9 665 aa23.77■■□□□ 1.4
ATF1-202ENST00000549612 TRIM47Q96LD4 638 aa23.77■■□□□ 1.4
ATF1-202ENST00000549612 PALD1Q9ULE6 856 aa23.77■■□□□ 1.4
ATF1-202ENST00000549612 AGTPBP1Q9UPW5 1226 aa23.77■■□□□ 1.4
ATF1-202ENST00000549612 USP17L5A8MUK1 530 aa23.76■■□□□ 1.39
ATF1-202ENST00000549612 PSMC4P43686 418 aa23.76■■□□□ 1.39
ATF1-202ENST00000549612 SLC9C1Q4G0N8 1177 aa23.76■■□□□ 1.39
ATF1-202ENST00000549612 PROCA1Q8NCQ7 364 aaPredicted RBP23.76■■□□□ 1.39
ATF1-202ENST00000549612 SPP2Q13103 211 aa23.75■■□□□ 1.39
ATF1-202ENST00000549612 NBPF11Q86T75 865 aa23.75■■□□□ 1.39
ATF1-202ENST00000549612 KIAA0100Q14667 2235 aaKnown RBP23.75■■□□□ 1.39
ATF1-202ENST00000549612 ATAD5Q96QE3 1844 aa23.75■■□□□ 1.39
ATF1-202ENST00000549612 RBBP6Q7Z6E9 1792 aaKnown RBP23.74■■□□□ 1.39
ATF1-202ENST00000549612 POTEFA5A3E0 1075 aa23.74■■□□□ 1.39
ATF1-202ENST00000549612 HLA-DOAP06340 250 aa23.74■■□□□ 1.39
ATF1-202ENST00000549612 CRACR2BQ8N4Y2 399 aaPredicted RBP23.74■■□□□ 1.39
ATF1-202ENST00000549612 SRRDQ9UH36 339 aa23.74■■□□□ 1.39
ATF1-202ENST00000549612 SAP30BPQ9UHR5 308 aaKnown RBP23.74■■□□□ 1.39
ATF1-202ENST00000549612 LOC285556D6RIA3 1793 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 ASNSP08243 561 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 OSBPP22059 807 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 USP5P45974 858 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 TREML2Q5T2D2 321 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 RIOK1Q9BRS2 568 aaKnown RBP23.73■■□□□ 1.39
ATF1-202ENST00000549612 WDR18Q9BV38 432 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 TRIM34Q9BYJ4 488 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 AS3MTQ9HBK9 375 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 GINM1Q9NU53 330 aa23.73■■□□□ 1.39
ATF1-202ENST00000549612 BRCA2P51587 3418 aa23.72■■□□□ 1.39
ATF1-202ENST00000549612 FMNL1O95466 1100 aaPredicted RBP23.72■■□□□ 1.39
ATF1-202ENST00000549612 PDE6AP16499 860 aa23.72■■□□□ 1.39
ATF1-202ENST00000549612 HOXD10P28358 340 aa23.72■■□□□ 1.39
ATF1-202ENST00000549612 HMGCS2P54868 508 aa23.72■■□□□ 1.39
ATF1-202ENST00000549612 JAG1P78504 1218 aa23.72■■□□□ 1.39
ATF1-202ENST00000549612 SH3D19Q5HYK7 790 aa23.72■■□□□ 1.39
ATF1-202ENST00000549612 DNAJC2Q99543 621 aaKnown RBP23.72■■□□□ 1.39
ATF1-202ENST00000549612 PNMA3Q9UL41 463 aa23.72■■□□□ 1.39
ATF1-202ENST00000549612 GOLIM4O00461 696 aa23.71■■□□□ 1.39
ATF1-202ENST00000549612 FCGRTP55899 365 aa23.71■■□□□ 1.39
ATF1-202ENST00000549612 SLC9C2Q5TAH2 1124 aa23.71■■□□□ 1.39
ATF1-202ENST00000549612 SMCR8Q8TEV9 937 aaPredicted RBP23.71■■□□□ 1.39
ATF1-202ENST00000549612 EHD4Q9H223 541 aa23.71■■□□□ 1.39
ATF1-202ENST00000549612 ECM2O94769 699 aaPredicted RBP23.7■■□□□ 1.38
ATF1-202ENST00000549612 ATP5JP18859 108 aa23.7■■□□□ 1.38
ATF1-202ENST00000549612 SH3TC2Q8TF17 1288 aa23.7■■□□□ 1.38
ATF1-202ENST00000549612 MYPNQ86TC9 1320 aa23.69■■□□□ 1.38
ATF1-202ENST00000549612 MAGEB6P1A0A0J9YX57 407 aa23.69■■□□□ 1.38
ATF1-202ENST00000549612 TCRBV5S4A2TA0A5A2 114 aa23.69■■□□□ 1.38
ATF1-202ENST00000549612 GDF11O95390 407 aa23.69■■□□□ 1.38
ATF1-202ENST00000549612 PABPC4Q13310 644 aaKnown RBP eCLIP23.69■■□□□ 1.38
ATF1-202ENST00000549612 SHROOM1Q2M3G4 852 aaPredicted RBP23.69■■□□□ 1.38
ATF1-202ENST00000549612 SLC4A8Q2Y0W8 1093 aa23.69■■□□□ 1.38
ATF1-202ENST00000549612 TMEM106CQ9BVX2 250 aa23.69■■□□□ 1.38
ATF1-202ENST00000549612 LRRCC1Q9C099 1032 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms