RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
CBX5-203ENST00000547872 TTF2Q9UNY4 1162 aaKnown RBP6.69□□□□□ -1.34
CBX5-203ENST00000547872 CCDC9Q9Y3X0 531 aaKnown RBP6.69□□□□□ -1.34
CBX5-203ENST00000547872 SETBP1Q9Y6X0 1596 aa6.69□□□□□ -1.34
CBX5-203ENST00000547872 NLRP1Q9C000 1473 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 CEP152O94986 1710 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 UBR1Q8IWV7 1749 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 LOC100289279A0A1B0GTE1 492 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 TPTE2Q6XPS3 522 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 KIAA1211Q6ZU35 1233 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 TMC4Q7Z404 712 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 FAM161BQ96MY7 647 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 CEP41Q9BYV8 373 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 VTI1BQ9UEU0 232 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 TMEM94Q12767 1356 aa6.68□□□□□ -1.34
CBX5-203ENST00000547872 CCDC18Q5T9S5 1454 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 SCAF11Q99590 1463 aaKnown RBP6.67□□□□□ -1.34
CBX5-203ENST00000547872 SORBS3O60504 671 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 FBXO24O75426 580 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 PROCP04070 461 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 MAOBP27338 520 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 RXRBP28702 533 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 HNRNPUQ00839 825 aaKnown RBP eCLIP6.67□□□□□ -1.34
CBX5-203ENST00000547872 FDX2Q6P4F2 183 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 CFDP1Q9UEE9 299 aaPredicted RBP6.67□□□□□ -1.34
CBX5-203ENST00000547872 CFAP65Q6ZU64 1925 aaKnown RBP6.67□□□□□ -1.34
CBX5-203ENST00000547872 JCADQ9P266 1359 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 MIA2Q96PC5 1412 aa6.67□□□□□ -1.34
CBX5-203ENST00000547872 MAP3K1Q13233 1512 aa6.66□□□□□ -1.34
CBX5-203ENST00000547872 GPATCH8Q9UKJ3 1502 aaKnown RBP6.66□□□□□ -1.34
CBX5-203ENST00000547872 COL16A1Q07092 1604 aaPredicted RBP6.66□□□□□ -1.34
CBX5-203ENST00000547872 SART1O43290 800 aaKnown RBP6.66□□□□□ -1.34
CBX5-203ENST00000547872 PDE3AQ14432 1141 aa6.66□□□□□ -1.34
CBX5-203ENST00000547872 NUTM2GQ5VZR2 741 aa6.66□□□□□ -1.34
CBX5-203ENST00000547872 TRIM56Q9BRZ2 755 aaKnown RBP6.66□□□□□ -1.34
CBX5-203ENST00000547872 NRSN2Q9GZP1 204 aa6.66□□□□□ -1.34
CBX5-203ENST00000547872 SAMM50Q9Y512 469 aa6.66□□□□□ -1.34
CBX5-203ENST00000547872 ZNF644Q9H582 1327 aaPredicted RBP6.66□□□□□ -1.34
CBX5-203ENST00000547872 RGS12O14924 1447 aa6.66□□□□□ -1.34
CBX5-203ENST00000547872 FAM135BQ49AJ0 1406 aa6.66□□□□□ -1.34
CBX5-203ENST00000547872 DOC2BQ14184 412 aa6.65□□□□□ -1.34
CBX5-203ENST00000547872 EXOSC6Q5RKV6 272 aaKnown RBP6.65□□□□□ -1.34
CBX5-203ENST00000547872 ZNF772Q68DY9 489 aaPredicted RBP6.65□□□□□ -1.34
CBX5-203ENST00000547872 ANKRD34AQ69YU3 496 aa6.65□□□□□ -1.34
CBX5-203ENST00000547872 Q6ZS46 218 aa6.65□□□□□ -1.34
CBX5-203ENST00000547872 SULF2Q8IWU5 870 aa6.65□□□□□ -1.34
CBX5-203ENST00000547872 TP53INP1Q96A56 240 aa6.65□□□□□ -1.34
CBX5-203ENST00000547872 MEGF10Q96KG7 1140 aa6.65□□□□□ -1.34
CBX5-203ENST00000547872 NECAB3Q96P71 396 aaPredicted RBP6.65□□□□□ -1.34
CBX5-203ENST00000547872 CYP4F12Q9HCS2 524 aa6.65□□□□□ -1.34
CBX5-203ENST00000547872 CCNB3Q8WWL7 1395 aa6.65□□□□□ -1.35
CBX5-203ENST00000547872 LRRC9Q6ZRR7 1453 aa6.65□□□□□ -1.35
CBX5-203ENST00000547872 TIAM1Q13009 1591 aa6.65□□□□□ -1.35
CBX5-203ENST00000547872 MEGF11A6BM72 1044 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 GSTP1P09211 210 aaKnown RBP6.64□□□□□ -1.35
CBX5-203ENST00000547872 NME2P22392 152 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 LTKP29376 864 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 ANKRD24Q8TF21 1146 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 CRELD1Q96HD1 420 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 SLC26A8Q96RN1 970 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 EMILIN2Q9BXX0 1053 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 TMPRSS13Q9BYE2 586 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 ZC3H12CQ9C0D7 883 aaKnown RBP6.64□□□□□ -1.35
CBX5-203ENST00000547872 CBX8Q9HC52 389 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 TPSG1Q9NRR2 321 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 RAD18Q9NS91 495 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 MSH6P52701 1360 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 ERVK-7P63135 1459 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 PLEKHH2Q8IVE3 1493 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 PIK3C2BO00750 1634 aa6.64□□□□□ -1.35
CBX5-203ENST00000547872 ENC1O14682 589 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 ABCC3O15438 1527 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 GAS2O43903 313 aaKnown RBP6.63□□□□□ -1.35
CBX5-203ENST00000547872 ECEL1O95672 775 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 DLGAP3O95886 979 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 CTSBP07858 339 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 ZNF16P17020 682 aaPredicted RBP6.63□□□□□ -1.35
CBX5-203ENST00000547872 AFF2P51816 1311 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 CCDC85BQ15834 202 aaPredicted RBP6.63□□□□□ -1.35
CBX5-203ENST00000547872 SV2BQ7L1I2 683 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 DZIP1LQ8IYY4 767 aaKnown RBP6.63□□□□□ -1.35
CBX5-203ENST00000547872 C12orf50Q8NA57 414 aaPredicted RBP6.63□□□□□ -1.35
CBX5-203ENST00000547872 KCNB2Q92953 911 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 C8orf37Q96NL8 207 aa6.63□□□□□ -1.35
CBX5-203ENST00000547872 SHPRHQ149N8 1683 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 NCOA2Q15596 1464 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 CELA3AP09093 270 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 ARNTP27540 789 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 UVSSAQ2YD98 709 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 MEI1Q5TIA1 1274 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 SMG8Q8ND04 991 aaKnown RBP6.62□□□□□ -1.35
CBX5-203ENST00000547872 UTP4Q969X6 686 aaKnown RBP6.62□□□□□ -1.35
CBX5-203ENST00000547872 SSBP4Q9BWG4 385 aaPredicted RBP6.62□□□□□ -1.35
CBX5-203ENST00000547872 SUGCTQ9HAC7 445 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 PODXL2Q9NZ53 605 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 EID1Q9Y6B2 187 aa6.62□□□□□ -1.35
CBX5-203ENST00000547872 KDM5AP29375 1690 aaKnown RBP6.61□□□□□ -1.35
CBX5-203ENST00000547872 EEA1Q15075 1411 aa6.61□□□□□ -1.35
CBX5-203ENST00000547872 CASKIN1Q8WXD9 1431 aa6.61□□□□□ -1.35
CBX5-203ENST00000547872 MTUS2Q5JR59 1369 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms