RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 COL11A2P13942 1736 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-215ENST00000547672 NID2Q14112 1375 aa15.68■□□□□ 0.1
PTCH1-215ENST00000547672 IARSP41252 1262 aaKnown RBP15.68■□□□□ 0.1
PTCH1-215ENST00000547672 SSRP1Q08945 709 aaKnown RBP15.68■□□□□ 0.1
PTCH1-215ENST00000547672 COL9A3Q14050 684 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-215ENST00000547672 TRIM29Q14134 588 aa15.68■□□□□ 0.1
PTCH1-215ENST00000547672 DIXDC1Q155Q3 683 aa15.68■□□□□ 0.1
PTCH1-215ENST00000547672 PPP4R3BQ5MIZ7 849 aa15.68■□□□□ 0.1
PTCH1-215ENST00000547672 IFIT1BQ5T764 474 aaKnown RBP15.68■□□□□ 0.1
PTCH1-215ENST00000547672 TGFBRAP1Q8WUH2 860 aa15.68■□□□□ 0.1
PTCH1-215ENST00000547672 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
PTCH1-215ENST00000547672 ZNF396Q96N95 335 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-215ENST00000547672 PIM2Q9P1W9 311 aa15.68■□□□□ 0.1
PTCH1-215ENST00000547672 HPS5Q9UPZ3 1129 aa15.68■□□□□ 0.1
PTCH1-215ENST00000547672 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTCH1-215ENST00000547672 TSPY2A6NKD2 308 aa15.67■□□□□ 0.1
PTCH1-215ENST00000547672 RTN1Q16799 776 aa15.67■□□□□ 0.1
PTCH1-215ENST00000547672 DGKHQ86XP1 1220 aa15.67■□□□□ 0.1
PTCH1-215ENST00000547672 C8orf76Q96K31 380 aa15.67■□□□□ 0.1
PTCH1-215ENST00000547672 MAP3K14Q99558 947 aa15.67■□□□□ 0.1
PTCH1-215ENST00000547672 TCP11L1Q9NUJ3 509 aa15.67■□□□□ 0.1
PTCH1-215ENST00000547672 STK36Q9NRP7 1315 aa15.67■□□□□ 0.1
PTCH1-215ENST00000547672 ROBO3Q96MS0 1386 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 ECE2O60344 883 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 JAK2O60674 1132 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 DDAH1O94760 285 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 CTDNEP1O95476 244 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 IFNAR1P17181 557 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 XBP1P17861 261 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 AKAP17AQ02040 695 aaKnown RBP15.66■□□□□ 0.1
PTCH1-215ENST00000547672 FANCBQ8NB91 859 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 ZDHHC15Q96MV8 337 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 NCOA5Q9HCD5 579 aaKnown RBP15.66■□□□□ 0.1
PTCH1-215ENST00000547672 RBM27Q9P2N5 1060 aaKnown RBP15.66■□□□□ 0.1
PTCH1-215ENST00000547672 SERPINA10Q9UK55 444 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 DAGLAQ9Y4D2 1042 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 SLX4Q8IY92 1834 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 TNKSO95271 1327 aa15.66■□□□□ 0.1
PTCH1-215ENST00000547672 PPIP5K2O43314 1243 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 C21orf2O43822 256 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
PTCH1-215ENST00000547672 LETM1O95202 739 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-215ENST00000547672 KIF5BP33176 963 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 GNAQP50148 359 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 UBE2HP62256 183 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 SEC23AQ15436 765 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 BRAPQ7Z569 592 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 ZNF654Q8IZM8 581 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 ANKS1AQ92625 1134 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 GPHNQ9NQX3 736 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-215ENST00000547672 USP40Q9NVE5 1235 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 ELP1O95163 1332 aa15.65■□□□□ 0.1
PTCH1-215ENST00000547672 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 HLA-DOAP06340 250 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 USP17L8P0C7I0 530 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 DPEP1P16444 411 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 RHBDL3P58872 404 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
PTCH1-215ENST00000547672 GRIK5Q16478 980 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
PTCH1-215ENST00000547672 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 MICU3Q86XE3 530 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 FBXO18Q8NFZ0 1043 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 CTCFLQ8NI51 663 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-215ENST00000547672 DHX36Q9H2U1 1008 aaKnown RBP15.64■□□□□ 0.09
PTCH1-215ENST00000547672 DBNDD1Q9H9R9 158 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 INCENPQ9NQS7 918 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 SWAP70Q9UH65 585 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 HDAC9Q9UKV0 1011 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 CD2APQ9Y5K6 639 aa15.64■□□□□ 0.09
PTCH1-215ENST00000547672 BAZ2AQ9UIF9 1905 aaKnown RBP15.63■□□□□ 0.09
PTCH1-215ENST00000547672 LAMB1P07942 1786 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 DLEC1Q9Y238 1755 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 FMNL1O95466 1100 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-215ENST00000547672 TSPY3P0CV98 308 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 TSPY8P0CW00 308 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 TFAP4Q01664 338 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 DALRD3Q5D0E6 543 aaKnown RBP15.63■□□□□ 0.09
PTCH1-215ENST00000547672 DACT2Q5SW24 774 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 OLFM4Q6UX06 510 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 C16orf86Q6ZW13 317 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 CDC37L1Q7L3B6 337 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 MAPKAPK5Q8IW41 473 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 ENAHQ8N8S7 591 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-215ENST00000547672 KAT14Q9H8E8 782 aa15.63■□□□□ 0.09
PTCH1-215ENST00000547672 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-215ENST00000547672 CYP2D7A0A087X1C5 515 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 DEXIO95424 95 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 ADD1P35611 737 aaKnown RBP15.62■□□□□ 0.09
PTCH1-215ENST00000547672 CRKP46108 304 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 AOC3Q16853 763 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 STK11IPQ8N1F8 1099 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 LARGE2Q8N3Y3 721 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 LZTS2Q9BRK4 669 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 ZKSCAN3Q9BRR0 538 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 ALG1Q9BT22 464 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 FLT1P17948 1338 aa15.62■□□□□ 0.09
PTCH1-215ENST00000547672 F8W031 263 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-215ENST00000547672 FDPSP14324 419 aaKnown RBP15.61■□□□□ 0.09
PTCH1-215ENST00000547672 DNM1Q05193 864 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms