RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 ERVK-24P63145 666 aa10.22□□□□□ -0.77
HIF1A-205ENST00000547430 TCEAL1Q15170 157 aa10.22□□□□□ -0.77
HIF1A-205ENST00000547430 LARP1BQ659C4 914 aaKnown RBP10.22□□□□□ -0.77
HIF1A-205ENST00000547430 ZNF662Q6ZS27 426 aa10.22□□□□□ -0.77
HIF1A-205ENST00000547430 TTC6Q86TZ1 520 aa10.22□□□□□ -0.77
HIF1A-205ENST00000547430 C12orf40Q86WS4 652 aa10.22□□□□□ -0.77
HIF1A-205ENST00000547430 ZSCAN1Q8NBB4 408 aa10.22□□□□□ -0.77
HIF1A-205ENST00000547430 UBASH3BQ8TF42 649 aa10.22□□□□□ -0.77
HIF1A-205ENST00000547430 RNPC3Q96LT9 517 aaKnown RBP10.22□□□□□ -0.77
HIF1A-205ENST00000547430 HIF3AQ9Y2N7 669 aa10.22□□□□□ -0.77
HIF1A-205ENST00000547430 CCDC85CA6NKD9 419 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 DLL1O00548 723 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 PDPK1O15530 556 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 NME1P15531 152 aaKnown RBP10.21□□□□□ -0.77
HIF1A-205ENST00000547430 HSD3B2P26439 372 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 EXOSC6Q5RKV6 272 aaKnown RBP10.21□□□□□ -0.77
HIF1A-205ENST00000547430 CDCP2Q5VXM1 449 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 FBXO11Q86XK2 927 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 ATG4CQ96DT6 458 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 WNT10AQ9GZT5 417 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 CSADQ9Y600 493 aa10.21□□□□□ -0.77
HIF1A-205ENST00000547430 ANKRD62A6NC57 917 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 TNFRSF10CO14798 259 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 TMPRSS2O15393 492 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 GJB6O95452 261 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 ACRP10323 421 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 GRK4P32298 578 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 GMPRP36959 345 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 ID3Q02535 119 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 TRAPPC3LQ5T215 181 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 INTS3Q68E01 1043 aaKnown RBP10.2□□□□□ -0.78
HIF1A-205ENST00000547430 NLRC3Q7RTR2 1065 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 FMR1NBQ8N0W7 255 aaPredicted RBP10.2□□□□□ -0.78
HIF1A-205ENST00000547430 WHAMMQ8TF30 809 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 TMPRSS13Q9BYE2 586 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 SLC12A7Q9Y666 1083 aa10.2□□□□□ -0.78
HIF1A-205ENST00000547430 SBNO2Q9Y2G9 1366 aa10.19□□□□□ -0.78
HIF1A-205ENST00000547430 A0A0A0MRY4 1105 aa10.19□□□□□ -0.78
HIF1A-205ENST00000547430 PGRP06401 933 aa10.19□□□□□ -0.78
HIF1A-205ENST00000547430 NCLP19338 710 aaKnown RBP10.19□□□□□ -0.78
HIF1A-205ENST00000547430 PPM1JQ5JR12 505 aa10.19□□□□□ -0.78
HIF1A-205ENST00000547430 ACSF2Q96CM8 615 aaPredicted RBP10.19□□□□□ -0.78
HIF1A-205ENST00000547430 RAD18Q9NS91 495 aa10.19□□□□□ -0.78
HIF1A-205ENST00000547430 CRIM1Q9NZV1 1036 aa10.19□□□□□ -0.78
HIF1A-205ENST00000547430 MEGF11A6BM72 1044 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 UPK3BL1B0FP48 263 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 UPK3BL2E5RIL1 263 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 FANCGO15287 622 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 WISP1O95388 367 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 NTF4P34130 210 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 IFRD2Q12894 506 aaPredicted RBP10.18□□□□□ -0.78
HIF1A-205ENST00000547430 DUOXA2Q1HG44 320 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 ZBTB37Q5TC79 503 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 TRIM11Q96F44 468 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 DNAJC7Q99615 494 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 PPP1R9AQ9ULJ8 1098 aa10.18□□□□□ -0.78
HIF1A-205ENST00000547430 B2RBV5 119 aa10.17□□□□□ -0.78
HIF1A-205ENST00000547430 ETF1P62495 437 aaKnown RBP10.17□□□□□ -0.78
HIF1A-205ENST00000547430 ZYXQ15942 572 aaKnown RBP10.17□□□□□ -0.78
HIF1A-205ENST00000547430 C6orf15Q6UXA7 325 aaPredicted RBP10.17□□□□□ -0.78
HIF1A-205ENST00000547430 UNC5AQ6ZN44 842 aa10.17□□□□□ -0.78
HIF1A-205ENST00000547430 FAM178BQ8IXR5 827 aa10.17□□□□□ -0.78
HIF1A-205ENST00000547430 LILRB2Q8N423 598 aa10.17□□□□□ -0.78
HIF1A-205ENST00000547430 RUSC1Q9BVN2 902 aa10.17□□□□□ -0.78
HIF1A-205ENST00000547430 KLHL3Q9UH77 587 aa10.17□□□□□ -0.78
HIF1A-205ENST00000547430 LTBP3Q9NS15 1303 aa10.16□□□□□ -0.78
HIF1A-205ENST00000547430 DDAH1O94760 285 aa10.16□□□□□ -0.78
HIF1A-205ENST00000547430 RAC1P63000 192 aa10.16□□□□□ -0.78
HIF1A-205ENST00000547430 ARSHQ5FYA8 562 aa10.16□□□□□ -0.78
HIF1A-205ENST00000547430 SH3TC2Q8TF17 1288 aa10.16□□□□□ -0.78
HIF1A-205ENST00000547430 SLC9A7Q96T83 725 aa10.16□□□□□ -0.78
HIF1A-205ENST00000547430 SUGCTQ9HAC7 445 aa10.16□□□□□ -0.78
HIF1A-205ENST00000547430 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.16□□□□□ -0.78
HIF1A-205ENST00000547430 CHURC1-FNTBB4DL54 471 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 AKAP4Q5JQC9 854 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 ZNF385CQ66K41 422 aaPredicted RBP10.15□□□□□ -0.78
HIF1A-205ENST00000547430 MRM1Q6IN84 353 aaKnown RBP10.15□□□□□ -0.78
HIF1A-205ENST00000547430 KIAA1211Q6ZU35 1233 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 MCATQ8IVS2 390 aaKnown RBP10.15□□□□□ -0.78
HIF1A-205ENST00000547430 SLFN12Q8IYM2 578 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 RNF214Q8ND24 703 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 FANCD2OSQ96PS1 177 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 PHAXQ9H814 394 aaKnown RBP10.15□□□□□ -0.78
HIF1A-205ENST00000547430 RRAGCQ9HB90 399 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 DISC1Q9NRI5 854 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 TJP2Q9UDY2 1190 aa10.15□□□□□ -0.78
HIF1A-205ENST00000547430 LINC00114Q6XXX2 140 aa10.14□□□□□ -0.79
HIF1A-205ENST00000547430 MRPL41Q8IXM3 137 aaKnown RBP10.14□□□□□ -0.79
HIF1A-205ENST00000547430 SMG8Q8ND04 991 aaKnown RBP10.14□□□□□ -0.79
HIF1A-205ENST00000547430 ST13P5Q8NFI4 369 aaPredicted RBP10.14□□□□□ -0.79
HIF1A-205ENST00000547430 RNF208Q9H0X6 261 aa10.14□□□□□ -0.79
HIF1A-205ENST00000547430 KANSL2Q9H9L4 492 aa10.14□□□□□ -0.79
HIF1A-205ENST00000547430 PICK1Q9NRD5 415 aa10.14□□□□□ -0.79
HIF1A-205ENST00000547430 ADH5P11766 374 aa10.13□□□□□ -0.79
HIF1A-205ENST00000547430 MTERF2Q49AM1 385 aa10.13□□□□□ -0.79
HIF1A-205ENST00000547430 PLEKHG4Q58EX7 1191 aa10.13□□□□□ -0.79
HIF1A-205ENST00000547430 ACAD11Q709F0 780 aa10.13□□□□□ -0.79
HIF1A-205ENST00000547430 JMYQ8N9B5 988 aa10.13□□□□□ -0.79
HIF1A-205ENST00000547430 FAM13CQ8NE31 585 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms