RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MCMDC2Q4G0Z9 681 aa17.37■□□□□ 0.37
DDX54-203ENST00000546869 PAXIP1Q6ZW49 1069 aaPredicted RBP17.37■□□□□ 0.37
DDX54-203ENST00000546869 DDRGK1Q96HY6 314 aa17.37■□□□□ 0.37
DDX54-203ENST00000546869 CLMNQ96JQ2 1002 aa17.37■□□□□ 0.37
DDX54-203ENST00000546869 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
DDX54-203ENST00000546869 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
DDX54-203ENST00000546869 SBK1Q52WX2 424 aa17.36■□□□□ 0.37
DDX54-203ENST00000546869 SPRYD7Q5W111 196 aa17.36■□□□□ 0.37
DDX54-203ENST00000546869 ERO1BQ86YB8 467 aa17.36■□□□□ 0.37
DDX54-203ENST00000546869 GINM1Q9NU53 330 aa17.36■□□□□ 0.37
DDX54-203ENST00000546869 SAP30BPQ9UHR5 308 aaKnown RBP17.36■□□□□ 0.37
DDX54-203ENST00000546869 SERPINB13Q9UIV8 391 aa17.36■□□□□ 0.37
DDX54-203ENST00000546869 SNCAIPQ9Y6H5 919 aa17.36■□□□□ 0.37
DDX54-203ENST00000546869 POLR3DP05423 398 aaPredicted RBP17.35■□□□□ 0.37
DDX54-203ENST00000546869 INPP5BP32019 993 aa17.35■□□□□ 0.37
DDX54-203ENST00000546869 PLCD1P51178 756 aa17.35■□□□□ 0.37
DDX54-203ENST00000546869 PPATQ06203 517 aa17.35■□□□□ 0.37
DDX54-203ENST00000546869 GABPAQ06546 454 aa17.35■□□□□ 0.37
DDX54-203ENST00000546869 C12orf60Q5U649 245 aa17.35■□□□□ 0.37
DDX54-203ENST00000546869 TATDN1Q6P1N9 297 aa17.35■□□□□ 0.37
DDX54-203ENST00000546869 ZKSCAN4Q969J2 545 aaPredicted RBP17.35■□□□□ 0.37
DDX54-203ENST00000546869 CDK5RAP2Q96SN8 1893 aa17.35■□□□□ 0.37
DDX54-203ENST00000546869 SPDYE5A6NIY4 337 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
DDX54-203ENST00000546869 INHBEP58166 350 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 MAP2K1Q02750 393 aaPredicted RBP17.34■□□□□ 0.37
DDX54-203ENST00000546869 NMIQ13287 307 aaPredicted RBP17.34■□□□□ 0.37
DDX54-203ENST00000546869 CTR9Q6PD62 1173 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 AMOTL1Q8IY63 956 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 CRACR2BQ8N4Y2 399 aaPredicted RBP17.34■□□□□ 0.37
DDX54-203ENST00000546869 WNK4Q96J92 1243 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 FAM227BQ96M60 508 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 NACAP1Q9BZK3 213 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 DNAJC18Q9H819 358 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 ELP3Q9H9T3 547 aa17.34■□□□□ 0.37
DDX54-203ENST00000546869 ARPP21Q9UBL0 812 aaPredicted RBP17.34■□□□□ 0.37
DDX54-203ENST00000546869 THSD7BQ9C0I4 1608 aa17.33■□□□□ 0.37
DDX54-203ENST00000546869 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 USP17L12C9JPN9 530 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 USP17L21D6R901 530 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 AOC2O75106 756 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 CAP2P40123 477 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 TM4SF4P48230 202 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 KIF23Q02241 960 aaPredicted RBP17.33■□□□□ 0.36
DDX54-203ENST00000546869 BMP2KLQ5H9B9 411 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 IFNL3Q8IZI9 196 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 TRIM34Q9BYJ4 488 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 SWAP70Q9UH65 585 aa17.33■□□□□ 0.36
DDX54-203ENST00000546869 SLURP2P0DP57 97 aa17.32■□□□□ 0.36
DDX54-203ENST00000546869 ALX1Q15699 326 aa17.32■□□□□ 0.36
DDX54-203ENST00000546869 OPTNQ96CV9 577 aa17.32■□□□□ 0.36
DDX54-203ENST00000546869 TBC1D2Q9BYX2 928 aa17.32■□□□□ 0.36
DDX54-203ENST00000546869 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
DDX54-203ENST00000546869 DDX60LQ5H9U9 1706 aaKnown RBP17.32■□□□□ 0.36
DDX54-203ENST00000546869 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
DDX54-203ENST00000546869 MANSC4A6NHS7 340 aaPredicted RBP17.31■□□□□ 0.36
DDX54-203ENST00000546869 FOXP2O15409 715 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 APPP05067 770 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 PTPRAP18433 802 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 GJA5P36382 358 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 GRM1Q13255 1194 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 PPIL2Q13356 520 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 ZIC5Q96T25 663 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
DDX54-203ENST00000546869 PICK1Q9NRD5 415 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 WBP1LQ9NX94 342 aa17.31■□□□□ 0.36
DDX54-203ENST00000546869 ZMYM6O95789 1325 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 CCDC171Q6TFL3 1326 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 MYH1P12882 1939 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 FAM196BA6NMK8 535 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 CXCL11O14625 94 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 ASNSP08243 561 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 CHMLP26374 656 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 SHMT1P34896 483 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 GTF2A2P52657 109 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 RRP1BQ14684 758 aaKnown RBP17.3■□□□□ 0.36
DDX54-203ENST00000546869 CWC27Q6UX04 472 aaKnown RBP17.3■□□□□ 0.36
DDX54-203ENST00000546869 C16orf86Q6ZW13 317 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 KCNH4Q9UQ05 1017 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 SIPA1L1O43166 1804 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 CEP350Q5VT06 3117 aa17.3■□□□□ 0.36
DDX54-203ENST00000546869 RAD50Q92878 1312 aa17.29■□□□□ 0.36
DDX54-203ENST00000546869 CYP2D6P10635 497 aa17.29■□□□□ 0.36
DDX54-203ENST00000546869 HSPD1P10809 573 aaKnown RBP17.29■□□□□ 0.36
DDX54-203ENST00000546869 TDO2P48775 406 aa17.29■□□□□ 0.36
DDX54-203ENST00000546869 CCDC129Q6ZRS4 1044 aa17.29■□□□□ 0.36
DDX54-203ENST00000546869 ZNF589Q86UQ0 364 aaPredicted RBP17.29■□□□□ 0.36
DDX54-203ENST00000546869 RUFY2Q8WXA3 655 aa17.29■□□□□ 0.36
DDX54-203ENST00000546869 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
DDX54-203ENST00000546869 OTOFQ9HC10 1997 aa17.29■□□□□ 0.36
DDX54-203ENST00000546869 ROBO3Q96MS0 1386 aa17.28■□□□□ 0.36
DDX54-203ENST00000546869 IRF6O14896 467 aa17.28■□□□□ 0.36
DDX54-203ENST00000546869 CA12O43570 354 aa17.28■□□□□ 0.36
DDX54-203ENST00000546869 SLC4A8Q2Y0W8 1093 aa17.28■□□□□ 0.36
DDX54-203ENST00000546869 CERKLQ49MI3 558 aaPredicted RBP17.28■□□□□ 0.36
DDX54-203ENST00000546869 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms