RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ZNF444Q8N0Y2 327 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-212ENST00000546744 CCHCR1Q8TD31 782 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 IQSEC3Q9UPP2 1182 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-212ENST00000546744 TLDC2A0PJX2 215 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 LRRD1A4D1F6 860 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 KRT13P13646 458 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 TBC1D8BQ0IIM8 1120 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 SUDS3Q9H7L9 328 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-212ENST00000546744 MACROD2A1Z1Q3 448 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 HPDP32754 393 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-212ENST00000546744 LONRF2Q1L5Z9 754 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 C8orf58Q8NAV2 365 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 TMEM87AQ8NBN3 555 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 RAB17Q9H0T7 212 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 VCX3AQ9NNX9 186 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 SIGLEC1Q9BZZ2 1709 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 MYO1CO00159 1063 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 IKBKBO14920 756 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 EVI5O60447 810 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 MAP3K21Q5TCX8 1036 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 TRMT2AQ8IZ69 625 aaKnown RBP14.31□□□□□ -0.12
PTCH1-212ENST00000546744 SYCE1Q8N0S2 351 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 GBP5Q96PP8 586 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 MIS18AQ9NYP9 233 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 ROBO2Q9HCK4 1378 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 A0A1W2PQ27 194 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 A0A1W2PQ64 194 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 A0A1W2PQD8 194 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 TBCAO75347 108 aaKnown RBP14.31□□□□□ -0.12
PTCH1-212ENST00000546744 HOXB7P09629 217 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 KSR2Q6VAB6 950 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 SLF2Q8IX21 1173 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 ODF2LQ9ULJ1 636 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 FAN1Q9Y2M0 1017 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 MORC2Q9Y6X9 1032 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-212ENST00000546744 ADGRB1O14514 1584 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 E7EVH7 732 aa14.31□□□□□ -0.12
PTCH1-212ENST00000546744 CHUKO15111 745 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 KRT2P35908 639 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 TSC1Q92574 1164 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 PYCARDQ9ULZ3 195 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 LIG3P49916 1009 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 SEL1L2Q5TEA6 688 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 NAP1L4Q99733 375 aaKnown RBP14.3□□□□□ -0.12
PTCH1-212ENST00000546744 HSPA2P54652 639 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 SLC9C1Q4G0N8 1177 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 OR8K1Q8NGG5 319 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 FERMT2Q96AC1 680 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 MCUR1Q96AQ8 359 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 TCEANC2Q96MN5 208 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-212ENST00000546744 UBA5Q9GZZ9 404 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 KAT14Q9H8E8 782 aa14.3□□□□□ -0.12
PTCH1-212ENST00000546744 LDHCP07864 332 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 RPL13P26373 211 aaKnown RBP14.29□□□□□ -0.12
PTCH1-212ENST00000546744 CCDC62Q6P9F0 684 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-212ENST00000546744 KCNK9Q9NPC2 374 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 RNF14Q9UBS8 474 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 MTMR6Q9Y217 621 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 HNRNPH2P55795 449 aaKnown RBP14.29□□□□□ -0.12
PTCH1-212ENST00000546744 PAK1Q13153 545 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 HSP90AA5PQ58FG0 334 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 ABCF2Q9UG63 623 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 TNNQ9UQP3 1299 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 HYOU1Q9Y4L1 999 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 RNF113AO15541 343 aaKnown RBP14.29□□□□□ -0.12
PTCH1-212ENST00000546744 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 CUL5Q93034 780 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 SYTL4Q96C24 671 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-212ENST00000546744 PPP1R12CQ9BZL4 782 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 SLC27A2O14975 620 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 NBPF14Q5TI25 921 aa14.29□□□□□ -0.12
PTCH1-212ENST00000546744 FLOT1O75955 427 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 PNMA6AP0CW24 399 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-212ENST00000546744 ARID4AP29374 1257 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-212ENST00000546744 HSP90AA4PQ58FG1 418 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 CASQ2O14958 399 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-212ENST00000546744 MAGEA1P43355 309 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 LRMPQ12912 555 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 ZBTB17Q13105 803 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 CNNM4Q6P4Q7 775 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 SARM1Q6SZW1 724 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 PAG1Q9NWQ8 432 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 FOXO3O43524 673 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 TADA2BQ86TJ2 420 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 MAIP1Q8WWC4 291 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 OSBPL3Q9H4L5 887 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 FAM204AQ9H8W3 233 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 PDE11AQ9HCR9 933 aa14.28□□□□□ -0.12
PTCH1-212ENST00000546744 EDC4Q6P2E9 1401 aaKnown RBP14.28□□□□□ -0.12
PTCH1-212ENST00000546744 USP5P45974 858 aa14.27□□□□□ -0.12
PTCH1-212ENST00000546744 HAND2P61296 217 aa14.27□□□□□ -0.12
PTCH1-212ENST00000546744 KRT71Q3SY84 523 aa14.27□□□□□ -0.12
PTCH1-212ENST00000546744 DTHD1Q6ZMT9 781 aa14.27□□□□□ -0.12
PTCH1-212ENST00000546744 P3H4Q92791 437 aa14.27□□□□□ -0.12
PTCH1-212ENST00000546744 PPP1R13BQ96KQ4 1090 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms