RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 LONRF3Q496Y0 759 aa13.9□□□□□ -0.18
ATXN2-216ENST00000546483 HSP90B2PQ58FF3 399 aa13.9□□□□□ -0.18
ATXN2-216ENST00000546483 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
ATXN2-216ENST00000546483 SPATA20Q8TB22 786 aa13.9□□□□□ -0.18
ATXN2-216ENST00000546483 FAM107BQ9H098 131 aa13.9□□□□□ -0.18
ATXN2-216ENST00000546483 KCNH3Q9ULD8 1083 aa13.9□□□□□ -0.18
ATXN2-216ENST00000546483 NFE2L3Q9Y4A8 694 aa13.9□□□□□ -0.18
ATXN2-216ENST00000546483 A0A0G2JLW4 131 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 KLF18A0A0U1RQI7 1052 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 GOLGA8BA8MQT2 603 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 MARCKSP29966 332 aaPredicted RBP13.89□□□□□ -0.19
ATXN2-216ENST00000546483 APTXQ7Z2E3 356 aaKnown RBP13.89□□□□□ -0.19
ATXN2-216ENST00000546483 VPS37DQ86XT2 251 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 PDILTQ8N807 584 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 CNNM3Q8NE01 707 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 NCAPGQ9BPX3 1015 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 MAN1B1Q9UKM7 699 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
ATXN2-216ENST00000546483 PARP4Q9UKK3 1724 aaKnown RBP13.89□□□□□ -0.19
ATXN2-216ENST00000546483 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 CTAGE9A4FU28 777 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 PRC1O43663 620 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 LRP10Q7Z4F1 713 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 DESI2Q9BSY9 194 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 C5P01031 1676 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 MEGF6O75095 1541 aa13.89□□□□□ -0.19
ATXN2-216ENST00000546483 ZMYM6O95789 1325 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 GOLIM4O00461 696 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 CPLX1O14810 134 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 FOXP2O15409 715 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 N4BP1O75113 896 aaKnown RBP13.88□□□□□ -0.19
ATXN2-216ENST00000546483 CDKL5O76039 1030 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 PRPF6O94906 941 aaKnown RBP13.88□□□□□ -0.19
ATXN2-216ENST00000546483 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
ATXN2-216ENST00000546483 CASP7P55210 303 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 VSNL1P62760 191 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
ATXN2-216ENST00000546483 IMMTQ16891 758 aaKnown RBP13.88□□□□□ -0.19
ATXN2-216ENST00000546483 FOXR1Q6PIV2 292 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 RAD9BQ6WBX8 426 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 USP21Q9UK80 565 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.88□□□□□ -0.19
ATXN2-216ENST00000546483 BCL9LQ86UU0 1499 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 ITIH6Q6UXX5 1313 aa13.88□□□□□ -0.19
ATXN2-216ENST00000546483 A0A087WUV0 522 aaPredicted RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 CTAGE15A4D2H0 777 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 SEMA3EO15041 775 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 SHOX2O60902 331 aaPredicted RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 CTAGE8P0CG41 777 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 IL2RBP14784 551 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 MCM3P25205 808 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 ANTXR2P58335 489 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 FMR1Q06787 632 aaKnown RBP eCLIP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 CTAGE6Q86UF2 777 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 CTAGE4Q8IX94 777 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 MED15Q96RN5 788 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 IRX2Q9BZI1 471 aaPredicted RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 SOWAHDA6NJG2 315 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 PPFIA3O75145 1194 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 AMPD2Q01433 879 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 MTF1Q14872 753 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 POSTNQ15063 836 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 KRT40Q6A162 431 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 NCOA7Q8NI08 942 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 MYD88Q99836 296 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.196e-10■■□□□ 12.7
ATXN2-216ENST00000546483 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
ATXN2-216ENST00000546483 AFF2P51816 1311 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 SPATA31A1Q5TZJ5 1347 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 SPATA31A5Q5VU36 1347 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 SPATA31A7Q8IWB4 1347 aa13.87□□□□□ -0.19
ATXN2-216ENST00000546483 MFAP3LO75121 409 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 PLCD1P51178 756 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
ATXN2-216ENST00000546483 DNAJC21Q5F1R6 531 aaKnown RBP13.86□□□□□ -0.19
ATXN2-216ENST00000546483 TTLL5Q6EMB2 1281 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 KANK3Q6NY19 840 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 ATG9AQ7Z3C6 839 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 KRI1Q8N9T8 703 aaKnown RBP13.86□□□□□ -0.19
ATXN2-216ENST00000546483 CEP89Q96ST8 783 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 MYCBPQ99417 103 aaPredicted RBP13.86□□□□□ -0.19
ATXN2-216ENST00000546483 NAPGQ99747 312 aaPredicted RBP13.86□□□□□ -0.19
ATXN2-216ENST00000546483 ALG1Q9BT22 464 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 ABCC12Q96J65 1359 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 M0R2C6 588 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 SYF2O95926 243 aaKnown RBP13.86□□□□□ -0.19
ATXN2-216ENST00000546483 MMP14P50281 582 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 SF3B2Q13435 895 aaKnown RBP13.86□□□□□ -0.19
ATXN2-216ENST00000546483 VPS72Q15906 364 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 TTC39AQ5SRH9 613 aa13.86□□□□□ -0.19
ATXN2-216ENST00000546483 MMS22LQ6ZRQ5 1243 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms