RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
PRKDC-211ENST00000546304 TMC4Q7Z404 712 aa7.88□□□□□ -1.15
PRKDC-211ENST00000546304 ANKRD18AQ8IVF6 992 aa7.88□□□□□ -1.15
PRKDC-211ENST00000546304 CELF1Q92879 486 aaKnown RBP7.88□□□□□ -1.15
PRKDC-211ENST00000546304 INSM2Q96T92 566 aaPredicted RBP7.88□□□□□ -1.15
PRKDC-211ENST00000546304 ZNF395Q9H8N7 513 aaPredicted RBP7.88□□□□□ -1.15
PRKDC-211ENST00000546304 ZBTB40Q9NUA8 1239 aa7.88□□□□□ -1.15
PRKDC-211ENST00000546304 BCS1LQ9Y276 419 aa7.88□□□□□ -1.15
PRKDC-211ENST00000546304 SRGAP3O43295 1099 aa7.87□□□□□ -1.15
PRKDC-211ENST00000546304 YBX3P16989 372 aaKnown RBP eCLIP7.87□□□□□ -1.156e-10■■□□□ 11.4
PRKDC-211ENST00000546304 SOX11P35716 441 aa7.87□□□□□ -1.15
PRKDC-211ENST00000546304 IGHMBP2P38935 993 aaKnown RBP7.87□□□□□ -1.15
PRKDC-211ENST00000546304 SCTRP47872 440 aa7.87□□□□□ -1.15
PRKDC-211ENST00000546304 IRX6P78412 446 aaPredicted RBP7.87□□□□□ -1.15
PRKDC-211ENST00000546304 TAF7LQ5H9L4 462 aa7.87□□□□□ -1.15
PRKDC-211ENST00000546304 CEP85Q6P2H3 762 aa7.87□□□□□ -1.15
PRKDC-211ENST00000546304 SLC51AQ86UW1 340 aa7.87□□□□□ -1.15
PRKDC-211ENST00000546304 PHTF2Q8N3S3 785 aa7.87□□□□□ -1.15
PRKDC-211ENST00000546304 PSME4Q14997 1843 aa7.87□□□□□ -1.15
PRKDC-211ENST00000546304 PNMA6EA0A0J9YXQ4 647 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 WIPF1O43516 503 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 TRAK2O60296 914 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 BBOX1O75936 387 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 RFX5P48382 616 aaPredicted RBP7.86□□□□□ -1.15
PRKDC-211ENST00000546304 RPS8P62241 208 aaKnown RBP7.86□□□□□ -1.15
PRKDC-211ENST00000546304 CCDC93Q567U6 631 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 SOGA3Q5TF21 947 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 OLFM4Q6UX06 510 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 RNF217Q8TC41 542 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 MPHOSPH8Q99549 860 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 ATP6V0A2Q9Y487 856 aa7.86□□□□□ -1.15
PRKDC-211ENST00000546304 FIGNL2A6NMB9 653 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 C21orf2O43822 256 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 VSIG8P0DPA2 414 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 GPR162Q16538 588 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 CYP2U1Q7Z449 544 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 EXOC6Q8TAG9 804 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 KLHDC4Q8TBB5 520 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 SSH3Q8TE77 659 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 C7orf43Q8WVR3 580 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 IRF7Q92985 503 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 ZNF594Q96JF6 807 aaPredicted RBP7.85□□□□□ -1.15
PRKDC-211ENST00000546304 TMX4Q9H1E5 349 aaPredicted RBP7.85□□□□□ -1.15
PRKDC-211ENST00000546304 TAOK3Q9H2K8 898 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 POLMQ9NP87 494 aaPredicted RBP7.85□□□□□ -1.15
PRKDC-211ENST00000546304 BSDC1Q9NW68 430 aaPredicted RBP7.85□□□□□ -1.15
PRKDC-211ENST00000546304 ZNF609O15014 1411 aa7.85□□□□□ -1.15
PRKDC-211ENST00000546304 ZNF646O15015 1829 aaPredicted RBP7.85□□□□□ -1.15
PRKDC-211ENST00000546304 SCN9AQ15858 1988 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 XDHP47989 1333 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 LTBP3Q9NS15 1303 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 COL4A5P29400 1685 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 NFKBIEO00221 500 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 RAD21O60216 631 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 HMMRO75330 724 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 NEFLP07196 543 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 RNF144AP50876 292 aaPredicted RBP7.84□□□□□ -1.15
PRKDC-211ENST00000546304 RASSF7Q02833 373 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 PTPN12Q05209 780 aaKnown RBP7.84□□□□□ -1.15
PRKDC-211ENST00000546304 AAMPQ13685 434 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 SLFNL1Q499Z3 407 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 FOXD4L5Q5VV16 416 aaPredicted RBP7.84□□□□□ -1.15
PRKDC-211ENST00000546304 LDHAL6AQ6ZMR3 332 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 POM121Q96HA1 1249 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 SIL1Q9H173 461 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 OSBPL3Q9H4L5 887 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 COPRSQ9NQ92 184 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 CNNM1Q9NRU3 951 aa7.84□□□□□ -1.15
PRKDC-211ENST00000546304 PA2G4Q9UQ80 394 aaKnown RBP7.84□□□□□ -1.15
PRKDC-211ENST00000546304 MROH5Q6ZUA9 1318 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 A0A1W2PRU2 124 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 EYA2O00167 538 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 GRIN3BO60391 1043 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 PPFIA3O75145 1194 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 CIAO1O76071 339 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 UFL1O94874 794 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 GPC1P35052 558 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 VEGFBP49765 207 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 GPSM2P81274 684 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 ATP8B2P98198 1209 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 FKBP4Q02790 459 aaKnown RBP eCLIP7.83□□□□□ -1.16
PRKDC-211ENST00000546304 PTSQ03393 145 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 CHRNDQ07001 517 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 SEMA3FQ13275 785 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 METTL24Q5JXM2 366 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 DPP8Q6V1X1 898 aaPredicted RBP7.83□□□□□ -1.16
PRKDC-211ENST00000546304 SIRT2Q8IXJ6 389 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 RPAP2Q8IXW5 612 aaPredicted RBP7.83□□□□□ -1.16
PRKDC-211ENST00000546304 SP8Q8IXZ3 490 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 RTKN2Q8IZC4 609 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 PSMD1Q99460 953 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 PUS3Q9BZE2 481 aaKnown RBP7.83□□□□□ -1.16
PRKDC-211ENST00000546304 ANKIB1Q9P2G1 1089 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 MINPP1Q9UNW1 487 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 MED23Q9ULK4 1368 aa7.83□□□□□ -1.16
PRKDC-211ENST00000546304 MYCP01106 439 aaPredicted RBP7.82□□□□□ -1.16
PRKDC-211ENST00000546304 IL15P40933 162 aaPredicted RBP7.82□□□□□ -1.16
PRKDC-211ENST00000546304 CLN3Q13286 438 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 OS9Q13438 667 aaPredicted RBP7.82□□□□□ -1.16
PRKDC-211ENST00000546304 LRRC24Q50LG9 513 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms