RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ZNF112Q9UJU3 913 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 AK9Q5TCS8 1911 aa20.19■□□□□ 0.82
LTBR-215ENST00000546296 FAM196BA6NMK8 535 aa20.18■□□□□ 0.82
LTBR-215ENST00000546296 FAM155AB1AL88 458 aaPredicted RBP20.18■□□□□ 0.82
LTBR-215ENST00000546296 SDSP20132 328 aa20.18■□□□□ 0.82
LTBR-215ENST00000546296 AMOTL1Q8IY63 956 aa20.18■□□□□ 0.82
LTBR-215ENST00000546296 HELLSQ9NRZ9 838 aa20.18■□□□□ 0.82
LTBR-215ENST00000546296 PHF20L1A8MW92 1017 aa20.17■□□□□ 0.82
LTBR-215ENST00000546296 HIP1O00291 1037 aa20.17■□□□□ 0.82
LTBR-215ENST00000546296 GSPT1P15170 499 aaKnown RBP20.17■□□□□ 0.82
LTBR-215ENST00000546296 SPRYD7Q5W111 196 aa20.17■□□□□ 0.82
LTBR-215ENST00000546296 FAM227BQ96M60 508 aa20.17■□□□□ 0.82
LTBR-215ENST00000546296 DIAPH3Q9NSV4 1193 aa20.17■□□□□ 0.82
LTBR-215ENST00000546296 PATL2C9JE40 543 aaKnown RBP20.16■□□□□ 0.82
LTBR-215ENST00000546296 KIF23Q02241 960 aaPredicted RBP20.16■□□□□ 0.82
LTBR-215ENST00000546296 NMIQ13287 307 aaPredicted RBP20.16■□□□□ 0.82
LTBR-215ENST00000546296 MCMDC2Q4G0Z9 681 aa20.16■□□□□ 0.82
LTBR-215ENST00000546296 SKAP1Q86WV1 359 aa20.16■□□□□ 0.82
LTBR-215ENST00000546296 JMYQ8N9B5 988 aa20.16■□□□□ 0.82
LTBR-215ENST00000546296 OPTNQ96CV9 577 aa20.16■□□□□ 0.82
LTBR-215ENST00000546296 WNK4Q96J92 1243 aa20.16■□□□□ 0.82
LTBR-215ENST00000546296 PICK1Q9NRD5 415 aa20.16■□□□□ 0.82
LTBR-215ENST00000546296 SERPINB13Q9UIV8 391 aa20.16■□□□□ 0.82
LTBR-215ENST00000546296 SNCAIPQ9Y6H5 919 aa20.16■□□□□ 0.82
LTBR-215ENST00000546296 GSG1L2A8MUP6 293 aa20.15■□□□□ 0.82
LTBR-215ENST00000546296 CTNND1O60716 968 aaKnown RBP20.15■□□□□ 0.82
LTBR-215ENST00000546296 CYP2D6P10635 497 aa20.15■□□□□ 0.82
LTBR-215ENST00000546296 PLCD1P51178 756 aa20.15■□□□□ 0.82
LTBR-215ENST00000546296 CCDC129Q6ZRS4 1044 aa20.15■□□□□ 0.82
LTBR-215ENST00000546296 ZIC5Q96T25 663 aa20.15■□□□□ 0.82
LTBR-215ENST00000546296 NACAP1Q9BZK3 213 aa20.15■□□□□ 0.82
LTBR-215ENST00000546296 MYH7P12883 1935 aa20.15■□□□□ 0.82
LTBR-215ENST00000546296 A0A0D9SFI3 127 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 USP17L12C9JPN9 530 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 USP17L21D6R901 530 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 ZBTB48P10074 688 aaPredicted RBP20.14■□□□□ 0.81
LTBR-215ENST00000546296 TDO2P48775 406 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 MAP2K1Q02750 393 aaPredicted RBP20.14■□□□□ 0.81
LTBR-215ENST00000546296 NOL9Q5SY16 702 aaKnown RBP20.14■□□□□ 0.81
LTBR-215ENST00000546296 GIMAP6Q6P9H5 292 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 METTL16Q86W50 562 aaKnown RBP20.14■□□□□ 0.81
LTBR-215ENST00000546296 ERO1BQ86YB8 467 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 SCYL3Q8IZE3 742 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 OTUD5Q96G74 571 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 EHD4Q9H223 541 aa20.14■□□□□ 0.81
LTBR-215ENST00000546296 CTR9Q6PD62 1173 aa20.13■□□□□ 0.81
LTBR-215ENST00000546296 CWC27Q6UX04 472 aaKnown RBP20.13■□□□□ 0.81
LTBR-215ENST00000546296 REM2Q8IYK8 340 aaPredicted RBP20.13■□□□□ 0.81
LTBR-215ENST00000546296 BEGAINQ9BUH8 593 aa20.13■□□□□ 0.81
LTBR-215ENST00000546296 CYP2D7A0A087X1C5 515 aa20.12■□□□□ 0.81
LTBR-215ENST00000546296 SPDYE5A6NIY4 337 aa20.12■□□□□ 0.81
LTBR-215ENST00000546296 MINDY4BA8MYZ0 360 aa20.12■□□□□ 0.81
LTBR-215ENST00000546296 GJA5P36382 358 aa20.12■□□□□ 0.81
LTBR-215ENST00000546296 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
LTBR-215ENST00000546296 IFNL3Q8IZI9 196 aa20.12■□□□□ 0.81
LTBR-215ENST00000546296 ARPP21Q9UBL0 812 aaPredicted RBP20.12■□□□□ 0.81
LTBR-215ENST00000546296 MANSC4A6NHS7 340 aaPredicted RBP20.11■□□□□ 0.81
LTBR-215ENST00000546296 CAP2P40123 477 aa20.11■□□□□ 0.81
LTBR-215ENST00000546296 PPATQ06203 517 aa20.11■□□□□ 0.81
LTBR-215ENST00000546296 C12orf60Q5U649 245 aa20.11■□□□□ 0.81
LTBR-215ENST00000546296 NAPBQ9H115 298 aa20.11■□□□□ 0.81
LTBR-215ENST00000546296 DNAJC18Q9H819 358 aa20.11■□□□□ 0.81
LTBR-215ENST00000546296 FOCADQ5VW36 1801 aa20.11■□□□□ 0.81
LTBR-215ENST00000546296 CDK5RAP2Q96SN8 1893 aa20.1■□□□□ 0.81
LTBR-215ENST00000546296 PTPRAP18433 802 aa20.1■□□□□ 0.81
LTBR-215ENST00000546296 EVX2Q03828 476 aa20.1■□□□□ 0.81
LTBR-215ENST00000546296 SREBF2Q12772 1141 aa20.1■□□□□ 0.81
LTBR-215ENST00000546296 PPIL2Q13356 520 aa20.1■□□□□ 0.81
LTBR-215ENST00000546296 RRP1BQ14684 758 aaKnown RBP20.1■□□□□ 0.81
LTBR-215ENST00000546296 CERKLQ49MI3 558 aaPredicted RBP20.1■□□□□ 0.81
LTBR-215ENST00000546296 SBK1Q52WX2 424 aa20.1■□□□□ 0.81
LTBR-215ENST00000546296 DYNLL2Q96FJ2 89 aa20.1■□□□□ 0.81
LTBR-215ENST00000546296 ZHX2Q9Y6X8 837 aa20.1■□□□□ 0.81
LTBR-215ENST00000546296 CCDC171Q6TFL3 1326 aa20.09■□□□□ 0.81
LTBR-215ENST00000546296 GDF11O95390 407 aa20.09■□□□□ 0.81
LTBR-215ENST00000546296 GTF2A2P52657 109 aa20.09■□□□□ 0.81
LTBR-215ENST00000546296 INHBEP58166 350 aa20.09■□□□□ 0.81
LTBR-215ENST00000546296 TATDN1Q6P1N9 297 aa20.09■□□□□ 0.81
LTBR-215ENST00000546296 RUFY2Q8WXA3 655 aa20.09■□□□□ 0.81
LTBR-215ENST00000546296 EPB41L4AQ9HCS5 686 aaPredicted RBP20.09■□□□□ 0.81
LTBR-215ENST00000546296 SWAP70Q9UH65 585 aa20.09■□□□□ 0.81
LTBR-215ENST00000546296 MYH1P12882 1939 aa20.08■□□□□ 0.81
LTBR-215ENST00000546296 IRF6O14896 467 aa20.08■□□□□ 0.81
LTBR-215ENST00000546296 SHMT1P34896 483 aa20.08■□□□□ 0.81
LTBR-215ENST00000546296 GABPAQ06546 454 aa20.08■□□□□ 0.81
LTBR-215ENST00000546296 SNAPC2Q13487 334 aa20.08■□□□□ 0.81
LTBR-215ENST00000546296 VPS53Q5VIR6 699 aa20.08■□□□□ 0.81
LTBR-215ENST00000546296 ZNF589Q86UQ0 364 aaPredicted RBP20.08■□□□□ 0.81
LTBR-215ENST00000546296 WBP1LQ9NX94 342 aa20.08■□□□□ 0.81
LTBR-215ENST00000546296 TAOK2Q9UL54 1235 aa20.08■□□□□ 0.81
LTBR-215ENST00000546296 ASNSP08243 561 aa20.07■□□□□ 0.8
LTBR-215ENST00000546296 HSPA1AP0DMV8 641 aaKnown RBP20.07■□□□□ 0.8
LTBR-215ENST00000546296 HSPA1BP0DMV9 641 aaKnown RBP20.07■□□□□ 0.8
LTBR-215ENST00000546296 CHMLP26374 656 aa20.07■□□□□ 0.8
LTBR-215ENST00000546296 TM4SF4P48230 202 aa20.07■□□□□ 0.8
LTBR-215ENST00000546296 ABCB5Q2M3G0 1257 aa20.07■□□□□ 0.8
LTBR-215ENST00000546296 STK11IPQ8N1F8 1099 aa20.07■□□□□ 0.8
LTBR-215ENST00000546296 SLC44A5Q8NCS7 719 aa20.07■□□□□ 0.8
LTBR-215ENST00000546296 CABP5Q9NP86 173 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms