RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 UBLCP1Q8WVY7 318 aaPredicted RBP11.6□□□□□ -0.55
SOD2-216ENST00000546260 KCND1Q9NSA2 647 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 SAMSN1Q9NSI8 373 aaKnown RBP11.6□□□□□ -0.55
SOD2-216ENST00000546260 CHCHD3Q9NX63 227 aaKnown RBP11.6□□□□□ -0.55
SOD2-216ENST00000546260 HAND2P61296 217 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 ALS2CR12Q96Q35 445 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 KCNH3Q9ULD8 1083 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
SOD2-216ENST00000546260 KRT83P78385 493 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 ZRSR2Q15696 482 aaKnown RBP11.6□□□□□ -0.55
SOD2-216ENST00000546260 RPGRIP1Q96KN7 1286 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 PLB1Q6P1J6 1458 aa11.6□□□□□ -0.55
SOD2-216ENST00000546260 EME2A4GXA9 379 aaPredicted RBP11.59□□□□□ -0.55
SOD2-216ENST00000546260 GCOM1H8Y6P7 765 aaPredicted RBP11.59□□□□□ -0.55
SOD2-216ENST00000546260 C21orf2O43822 256 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 LUC7L3O95232 432 aaKnown RBP11.59□□□□□ -0.55
SOD2-216ENST00000546260 SYF2O95926 243 aaKnown RBP11.59□□□□□ -0.55
SOD2-216ENST00000546260 PDHA1P08559 390 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 MYZAPP0CAP1 466 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
SOD2-216ENST00000546260 UBXN1Q04323 297 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 NBPF10Q6P3W6 841 aaKnown RBP11.59□□□□□ -0.55
SOD2-216ENST00000546260 FAM210AQ96ND0 272 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 KLHL33A6NCF5 533 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 TRIM21P19474 475 aaKnown RBP11.59□□□□□ -0.55
SOD2-216ENST00000546260 LSP1P33241 339 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 TTC39AQ5SRH9 613 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 CCDC82Q8N4S0 544 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 USHBP1Q8N6Y0 703 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 B4GALNT2Q8NHY0 566 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 HVCN1Q96D96 273 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 FAXDC2Q96IV6 333 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 OSBPL9Q96SU4 736 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 KLF18A0A0U1RQI7 1052 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 PFDN1O60925 122 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 COBLO75128 1261 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 TAF4BQ92750 862 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 MMS19Q96T76 1030 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 LUC7L2Q9Y383 392 aaKnown RBP11.59□□□□□ -0.55
SOD2-216ENST00000546260 ZPR1O75312 459 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 AMPHP49418 695 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 ITFG2Q969R8 447 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 STAMBPL1Q96FJ0 436 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 ATP6V0A4Q9HBG4 840 aa11.59□□□□□ -0.55
SOD2-216ENST00000546260 CUL7Q14999 1698 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 PPP1R37O75864 691 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 FSBPO95073 299 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 APBA1Q02410 837 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 MYSM1Q5VVJ2 828 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 EID1Q9Y6B2 187 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 A0A1W2PQ27 194 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 A0A1W2PQ64 194 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 A0A1W2PQD8 194 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 CCDC38Q502W7 563 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 RAD9BQ6WBX8 426 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 IFT20Q8IY31 132 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 TC2NQ8N9U0 490 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 ZNF483Q8TF39 744 aaPredicted RBP11.58□□□□□ -0.56
SOD2-216ENST00000546260 ARL8AQ96BM9 186 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 EPN3Q9H201 632 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 C19orf44Q9H6X5 657 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 TAB2Q9NYJ8 693 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 AKR1B10O60218 316 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 HIP1RO75146 1068 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 KRT14P02533 472 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 GNAT1P11488 350 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 DDR1Q08345 913 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 TBC1D8BQ0IIM8 1120 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 ARHGEF25Q86VW2 580 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 RNF168Q8IYW5 571 aaPredicted RBP11.58□□□□□ -0.56
SOD2-216ENST00000546260 NOD2Q9HC29 1040 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 USH1CQ9Y6N9 552 aa11.58□□□□□ -0.56
SOD2-216ENST00000546260 ERVK-7P63135 1459 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 POLR2DO15514 142 aaKnown RBP11.57□□□□□ -0.56
SOD2-216ENST00000546260 EPHB4P54760 987 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 HHATQ5VTY9 493 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 RRAGBQ5VZM2 374 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 DHX32Q7L7V1 743 aaKnown RBP11.57□□□□□ -0.56
SOD2-216ENST00000546260 LINC00301Q8NCQ3 95 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 CDK19Q9BWU1 502 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 OSBPL1AQ9BXW6 950 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
SOD2-216ENST00000546260 PRPHP41219 470 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 TOB2Q14106 344 aaPredicted RBP11.57□□□□□ -0.56
SOD2-216ENST00000546260 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 DDX46Q7L014 1031 aaKnown RBP11.57□□□□□ -0.56
SOD2-216ENST00000546260 C3orf20Q8ND61 904 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 BPIFA3Q9BQP9 254 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 ALG1Q9BT22 464 aa11.57□□□□□ -0.56
SOD2-216ENST00000546260 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms