RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 HERC5Q9UII4 1024 aaKnown RBP24.89■■□□□ 1.58
SCARB1-211ENST00000546215 GTF3C3Q9Y5Q9 886 aa24.89■■□□□ 1.58
SCARB1-211ENST00000546215 UNCXA6NJT0 531 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 FAM196BA6NMK8 535 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 USP17L12C9JPN9 530 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 USP17L21D6R901 530 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 APPP05067 770 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 EVX2Q03828 476 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 DEFB115Q30KQ5 88 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 CTR9Q6PD62 1173 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.88■■□□□ 1.571e-7■■■■■ 49.3
SCARB1-211ENST00000546215 PHF20L1A8MW92 1017 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 CYP2D6P10635 497 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 MAP3K9P80192 1104 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.88■■□□□ 1.57
SCARB1-211ENST00000546215 WRNIP1Q96S55 665 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 EHD4Q9H223 541 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 DNAJC18Q9H819 358 aa24.88■■□□□ 1.57
SCARB1-211ENST00000546215 MFAP1P55081 439 aaKnown RBP24.87■■□□□ 1.57
SCARB1-211ENST00000546215 C12orf60Q5U649 245 aa24.87■■□□□ 1.57
SCARB1-211ENST00000546215 ANKRD13AQ8IZ07 590 aa24.87■■□□□ 1.57
SCARB1-211ENST00000546215 OTOFQ9HC10 1997 aa24.87■■□□□ 1.57
SCARB1-211ENST00000546215 CYP2D7A0A087X1C5 515 aa24.86■■□□□ 1.57
SCARB1-211ENST00000546215 HSPD1P10809 573 aaKnown RBP24.86■■□□□ 1.57
SCARB1-211ENST00000546215 SBK1Q52WX2 424 aa24.86■■□□□ 1.57
SCARB1-211ENST00000546215 RGMBQ6NW40 437 aa24.86■■□□□ 1.57
SCARB1-211ENST00000546215 RUFY2Q8WXA3 655 aa24.86■■□□□ 1.57
SCARB1-211ENST00000546215 NACAP1Q9BZK3 213 aa24.86■■□□□ 1.57
SCARB1-211ENST00000546215 ARPP21Q9UBL0 812 aaPredicted RBP24.86■■□□□ 1.57
SCARB1-211ENST00000546215 SERPINB13Q9UIV8 391 aa24.86■■□□□ 1.57
SCARB1-211ENST00000546215 SMIM22K7EJ46 135 aa24.85■■□□□ 1.57
SCARB1-211ENST00000546215 INPP5BP32019 993 aa24.85■■□□□ 1.57
SCARB1-211ENST00000546215 TDO2P48775 406 aa24.85■■□□□ 1.57
SCARB1-211ENST00000546215 GABPAQ06546 454 aa24.85■■□□□ 1.57
SCARB1-211ENST00000546215 CRACR2BQ8N4Y2 399 aaPredicted RBP24.85■■□□□ 1.57
SCARB1-211ENST00000546215 ZKSCAN4Q969J2 545 aaPredicted RBP24.85■■□□□ 1.57
SCARB1-211ENST00000546215 CLMNQ96JQ2 1002 aa24.85■■□□□ 1.57
SCARB1-211ENST00000546215 RAD50Q92878 1312 aa24.85■■□□□ 1.57
SCARB1-211ENST00000546215 VGLL4Q14135 290 aa24.84■■□□□ 1.57
SCARB1-211ENST00000546215 ALX1Q15699 326 aa24.84■■□□□ 1.57
SCARB1-211ENST00000546215 PCNTO95613 3336 aa24.84■■□□□ 1.57
SCARB1-211ENST00000546215 SGSM2O43147 1006 aa24.84■■□□□ 1.57
SCARB1-211ENST00000546215 ZNF157P51786 506 aaPredicted RBP24.84■■□□□ 1.57
SCARB1-211ENST00000546215 CYP4F22Q6NT55 531 aa24.84■■□□□ 1.57
SCARB1-211ENST00000546215 AMOTL1Q8IY63 956 aa24.84■■□□□ 1.57
SCARB1-211ENST00000546215 NAPBQ9H115 298 aa24.84■■□□□ 1.57
SCARB1-211ENST00000546215 RRP1BQ14684 758 aaKnown RBP24.83■■□□□ 1.57
SCARB1-211ENST00000546215 DNAJC5GQ8N7S2 189 aa24.83■■□□□ 1.57
SCARB1-211ENST00000546215 TRIM34Q9BYJ4 488 aa24.83■■□□□ 1.57
SCARB1-211ENST00000546215 CSADQ9Y600 493 aa24.83■■□□□ 1.57
SCARB1-211ENST00000546215 FGAP02671 866 aa24.82■■□□□ 1.56
SCARB1-211ENST00000546215 SLC10A4Q96EP9 437 aa24.82■■□□□ 1.56
SCARB1-211ENST00000546215 DYNLL2Q96FJ2 89 aa24.82■■□□□ 1.56
SCARB1-211ENST00000546215 SNCAIPQ9Y6H5 919 aa24.82■■□□□ 1.56
SCARB1-211ENST00000546215 MINDY4BA8MYZ0 360 aa24.81■■□□□ 1.56
SCARB1-211ENST00000546215 CTNND1O60716 968 aaKnown RBP24.81■■□□□ 1.56
SCARB1-211ENST00000546215 CDC45O75419 566 aa24.81■■□□□ 1.56
SCARB1-211ENST00000546215 NOL9Q5SY16 702 aaKnown RBP24.81■■□□□ 1.56
SCARB1-211ENST00000546215 TATDN1Q6P1N9 297 aa24.81■■□□□ 1.56
SCARB1-211ENST00000546215 RASAL3Q86YV0 1011 aa24.81■■□□□ 1.56
SCARB1-211ENST00000546215 FAM155AB1AL88 458 aaPredicted RBP24.8■■□□□ 1.56
SCARB1-211ENST00000546215 SHMT1P34896 483 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 VEGFBP49765 207 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 PAXIP1Q6ZW49 1069 aaPredicted RBP24.8■■□□□ 1.56
SCARB1-211ENST00000546215 CCDC102AQ96A19 550 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 CAPNS2Q96L46 248 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 DSCC1Q9BVC3 393 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 ELP3Q9H9T3 547 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 TAOK2Q9UL54 1235 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 ZMYM6O95789 1325 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 SLC10A3P09131 477 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 SLC44A5Q8NCS7 719 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 ESYT1Q9BSJ8 1104 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.8■■□□□ 1.56
SCARB1-211ENST00000546215 SWAP70Q9UH65 585 aa24.8■■□□□ 1.56
SCARB1-211ENST00000546215 CAP2P40123 477 aa24.79■■□□□ 1.56
SCARB1-211ENST00000546215 ECE1P42892 770 aa24.79■■□□□ 1.56
SCARB1-211ENST00000546215 C16orf86Q6ZW13 317 aa24.79■■□□□ 1.56
SCARB1-211ENST00000546215 SCYL3Q8IZE3 742 aa24.79■■□□□ 1.56
SCARB1-211ENST00000546215 WDR33Q9C0J8 1336 aaKnown RBP24.79■■□□□ 1.56
SCARB1-211ENST00000546215 LAMB1P07942 1786 aa24.78■■□□□ 1.56
SCARB1-211ENST00000546215 PPARAQ07869 468 aa24.78■■□□□ 1.56
SCARB1-211ENST00000546215 ROBO3Q96MS0 1386 aa24.78■■□□□ 1.56
SCARB1-211ENST00000546215 CDK8P49336 464 aa24.77■■□□□ 1.56
SCARB1-211ENST00000546215 JAG1P78504 1218 aa24.77■■□□□ 1.56
SCARB1-211ENST00000546215 GRM1Q13255 1194 aa24.77■■□□□ 1.56
SCARB1-211ENST00000546215 CNKSR2Q8WXI2 1034 aa24.77■■□□□ 1.56
SCARB1-211ENST00000546215 OPTNQ96CV9 577 aa24.77■■□□□ 1.56
SCARB1-211ENST00000546215 SPDYE5A6NIY4 337 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 GJA5P36382 358 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 PTH1RQ03431 593 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 CERKLQ49MI3 558 aaPredicted RBP24.76■■□□□ 1.55
SCARB1-211ENST00000546215 SPRYD7Q5W111 196 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 CASC1Q6TDU7 716 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 WNK4Q96J92 1243 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 DOCK1Q14185 1865 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 GDF11O95390 407 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 SHROOM1Q2M3G4 852 aaPredicted RBP24.76■■□□□ 1.55
SCARB1-211ENST00000546215 ERO1BQ86YB8 467 aa24.76■■□□□ 1.55
SCARB1-211ENST00000546215 ANAPC4Q9UJX5 808 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms