RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 CDAN1Q8IWY9 1227 aa20.93■□□□□ 0.94
CD9-211ENST00000546073 OSBP2Q969R2 916 aa20.93■□□□□ 0.94
CD9-211ENST00000546073 STRBPQ96SI9 672 aaKnown RBP20.93■□□□□ 0.94
CD9-211ENST00000546073 DCP1AQ9NPI6 582 aaPredicted RBP20.93■□□□□ 0.94
CD9-211ENST00000546073 ARPP21Q9UBL0 812 aaPredicted RBP20.93■□□□□ 0.94
CD9-211ENST00000546073 MANSC4A6NHS7 340 aaPredicted RBP20.92■□□□□ 0.94
CD9-211ENST00000546073 PATL2C9JE40 543 aaKnown RBP20.92■□□□□ 0.94
CD9-211ENST00000546073 SDSP20132 328 aa20.92■□□□□ 0.94
CD9-211ENST00000546073 PDE4AP27815 886 aa20.92■□□□□ 0.94
CD9-211ENST00000546073 CASC1Q6TDU7 716 aa20.92■□□□□ 0.94
CD9-211ENST00000546073 SH3BP5LQ7L8J4 393 aa20.92■□□□□ 0.94
CD9-211ENST00000546073 CABP5Q9NP86 173 aa20.92■□□□□ 0.94
CD9-211ENST00000546073 KIF23Q02241 960 aaPredicted RBP20.91■□□□□ 0.94
CD9-211ENST00000546073 MKRN3Q13064 507 aaKnown RBP20.91■□□□□ 0.94
CD9-211ENST00000546073 SLC4A8Q2Y0W8 1093 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 SLFNL1Q499Z3 407 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 SPRYD7Q5W111 196 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 SCYL3Q8IZE3 742 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 ZKSCAN4Q969J2 545 aaPredicted RBP20.91■□□□□ 0.94
CD9-211ENST00000546073 OPTNQ96CV9 577 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 CLMNQ96JQ2 1002 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 TBC1D2Q9BYX2 928 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 NAPBQ9H115 298 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 EHD4Q9H223 541 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 GINM1Q9NU53 330 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 SWAP70Q9UH65 585 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 ZNF112Q9UJU3 913 aa20.91■□□□□ 0.94
CD9-211ENST00000546073 CA12O43570 354 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 PRKAB2O43741 272 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 AOC2O75106 756 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 GTF2A2P52657 109 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 MAP3K10Q02779 954 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 PPATQ06203 517 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.9■□□□□ 0.94
CD9-211ENST00000546073 OTUD5Q96G74 571 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 WNK4Q96J92 1243 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 AS3MTQ9HBK9 375 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 DOCK2Q92608 1830 aa20.9■□□□□ 0.94
CD9-211ENST00000546073 SSC5DA1L4H1 1573 aa20.89■□□□□ 0.94
CD9-211ENST00000546073 AK9Q5TCS8 1911 aa20.89■□□□□ 0.93
CD9-211ENST00000546073 M0R2C6 588 aa20.89■□□□□ 0.93
CD9-211ENST00000546073 ASNSP08243 561 aa20.89■□□□□ 0.93
CD9-211ENST00000546073 INPP5BP32019 993 aa20.89■□□□□ 0.93
CD9-211ENST00000546073 NOL9Q5SY16 702 aaKnown RBP20.89■□□□□ 0.93
CD9-211ENST00000546073 JMYQ8N9B5 988 aa20.89■□□□□ 0.93
CD9-211ENST00000546073 SPDYE5A6NIY4 337 aa20.88■□□□□ 0.93
CD9-211ENST00000546073 MINDY4BA8MYZ0 360 aa20.88■□□□□ 0.93
CD9-211ENST00000546073 USP17L12C9JPN9 530 aa20.88■□□□□ 0.93
CD9-211ENST00000546073 USP17L21D6R901 530 aa20.88■□□□□ 0.93
CD9-211ENST00000546073 SNAPC2Q13487 334 aa20.88■□□□□ 0.93
CD9-211ENST00000546073 CWC27Q6UX04 472 aaKnown RBP20.88■□□□□ 0.93
CD9-211ENST00000546073 FAM155AB1AL88 458 aaPredicted RBP20.87■□□□□ 0.93
CD9-211ENST00000546073 ALDH1A1P00352 501 aa20.87■□□□□ 0.93
CD9-211ENST00000546073 CETPP11597 493 aa20.87■□□□□ 0.93
CD9-211ENST00000546073 CAP2P40123 477 aa20.87■□□□□ 0.93
CD9-211ENST00000546073 NMIQ13287 307 aaPredicted RBP20.87■□□□□ 0.93
CD9-211ENST00000546073 PPIL2Q13356 520 aa20.87■□□□□ 0.93
CD9-211ENST00000546073 CERKLQ49MI3 558 aaPredicted RBP20.87■□□□□ 0.93
CD9-211ENST00000546073 SEC62Q99442 399 aaKnown RBP20.87■□□□□ 0.93
CD9-211ENST00000546073 MKNK2Q9HBH9 465 aa20.87■□□□□ 0.93
CD9-211ENST00000546073 PHF20L1A8MW92 1017 aa20.86■□□□□ 0.93
CD9-211ENST00000546073 MPHOSPH10O00566 681 aaKnown RBP20.86■□□□□ 0.93
CD9-211ENST00000546073 CHGBP05060 677 aa20.86■□□□□ 0.93
CD9-211ENST00000546073 IFNL3Q8IZI9 196 aa20.86■□□□□ 0.93
CD9-211ENST00000546073 SNCAIPQ9Y6H5 919 aa20.86■□□□□ 0.93
CD9-211ENST00000546073 ZHX2Q9Y6X8 837 aa20.86■□□□□ 0.93
CD9-211ENST00000546073 FAM196BA6NMK8 535 aa20.85■□□□□ 0.93
CD9-211ENST00000546073 USP17L5A8MUK1 530 aa20.85■□□□□ 0.93
CD9-211ENST00000546073 GSG1L2A8MUP6 293 aa20.85■□□□□ 0.93
CD9-211ENST00000546073 PDE4BQ07343 736 aa20.85■□□□□ 0.93
CD9-211ENST00000546073 SBK1Q52WX2 424 aa20.85■□□□□ 0.93
CD9-211ENST00000546073 C12orf60Q5U649 245 aa20.85■□□□□ 0.93
CD9-211ENST00000546073 METTL16Q86W50 562 aaKnown RBP20.85■□□□□ 0.93
CD9-211ENST00000546073 CCDC17Q96LX7 622 aa20.85■□□□□ 0.93
CD9-211ENST00000546073 FAM227BQ96M60 508 aa20.85■□□□□ 0.93
CD9-211ENST00000546073 CCDC171Q6TFL3 1326 aa20.84■□□□□ 0.93
CD9-211ENST00000546073 PLCD1P51178 756 aa20.84■□□□□ 0.93
CD9-211ENST00000546073 ABCB5Q2M3G0 1257 aa20.84■□□□□ 0.93
CD9-211ENST00000546073 CTR9Q6PD62 1173 aa20.84■□□□□ 0.93
CD9-211ENST00000546073 KIAA1211Q6ZU35 1233 aa20.84■□□□□ 0.93
CD9-211ENST00000546073 ZNF444Q8N0Y2 327 aaPredicted RBP20.84■□□□□ 0.93
CD9-211ENST00000546073 CTNNA3Q9UI47 895 aa20.84■□□□□ 0.93
CD9-211ENST00000546073 CXCL11O14625 94 aa20.83■□□□□ 0.93
CD9-211ENST00000546073 GSPT1P15170 499 aaKnown RBP20.83■□□□□ 0.93
CD9-211ENST00000546073 PTPRAP18433 802 aa20.83■□□□□ 0.93
CD9-211ENST00000546073 CCDC129Q6ZRS4 1044 aa20.83■□□□□ 0.93
CD9-211ENST00000546073 FASTKD5Q7L8L6 764 aaKnown RBP20.83■□□□□ 0.93
CD9-211ENST00000546073 RAD50Q92878 1312 aa20.82■□□□□ 0.92
CD9-211ENST00000546073 MYO5AQ9Y4I1 1855 aaKnown RBP20.82■□□□□ 0.92
CD9-211ENST00000546073 CCL15-CCL14A0A0B4J2E2 113 aa20.82■□□□□ 0.92
CD9-211ENST00000546073 A0A0D9SFI3 127 aa20.82■□□□□ 0.92
CD9-211ENST00000546073 TM4SF4P48230 202 aa20.82■□□□□ 0.92
CD9-211ENST00000546073 RAB3GAP1Q15042 981 aa20.82■□□□□ 0.92
CD9-211ENST00000546073 CCL15Q16663 113 aa20.82■□□□□ 0.92
CD9-211ENST00000546073 BMP2KLQ5H9B9 411 aa20.82■□□□□ 0.92
CD9-211ENST00000546073 TATDN1Q6P1N9 297 aa20.82■□□□□ 0.92
CD9-211ENST00000546073 IRF6O14896 467 aa20.81■□□□□ 0.92
CD9-211ENST00000546073 GDF11O95390 407 aa20.81■□□□□ 0.92
CD9-211ENST00000546073 HSPA1AP0DMV8 641 aaKnown RBP20.81■□□□□ 0.92
CD9-211ENST00000546073 HSPA1BP0DMV9 641 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms