RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 RIPOR2Q9Y4F9 1068 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 WDR33Q9C0J8 1336 aaKnown RBP9.59□□□□□ -0.87
SNHG1-223ENST00000545440 AK9Q5TCS8 1911 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 ZBBXA8MT70 800 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 ADM5C9JUS6 153 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 SNAP23O00161 211 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 FKBP1AP62942 108 aaKnown RBP9.59□□□□□ -0.87
SNHG1-223ENST00000545440 GTF2IP78347 998 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 NR1H3Q13133 447 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 ANGEL2Q5VTE6 544 aaKnown RBP9.59□□□□□ -0.87
SNHG1-223ENST00000545440 USP48Q86UV5 1035 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 VGLL2Q8N8G2 317 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 CAPNS2Q96L46 248 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 MXD3Q9BW11 206 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 PUS3Q9BZE2 481 aaKnown RBP9.59□□□□□ -0.87
SNHG1-223ENST00000545440 MAP10Q9P2G4 905 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 HDAC9Q9UKV0 1011 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 HDAC5Q9UQL6 1122 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 GPSM3Q9Y4H4 160 aa9.59□□□□□ -0.87
SNHG1-223ENST00000545440 ASTN2O75129 1339 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-223ENST00000545440 MAST2Q6P0Q8 1798 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 CASP8AP2Q9UKL3 1982 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 IPO8O15397 1037 aaKnown RBP9.58□□□□□ -0.88
SNHG1-223ENST00000545440 PLIN1O60240 522 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 MCCD1P59942 119 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-223ENST00000545440 SCARF1Q14162 830 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 METTL24Q5JXM2 366 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 INTS3Q68E01 1043 aaKnown RBP9.58□□□□□ -0.88
SNHG1-223ENST00000545440 KIAA0825Q8IV33 1275 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 ZNF408Q9H9D4 720 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 PRDM9Q9NQV7 894 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 DOCK2Q92608 1830 aa9.58□□□□□ -0.88
SNHG1-223ENST00000545440 FAM205AQ6ZU69 1335 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 EYA2O00167 538 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 WNT10BO00744 389 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 SASH1O94885 1247 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 PDE8BO95263 885 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 TRIM27P14373 513 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 RFX5P48382 616 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-223ENST00000545440 MAP2K1Q02750 393 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-223ENST00000545440 IRF5Q13568 498 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 PUM3Q15397 648 aaKnown RBP9.57□□□□□ -0.88
SNHG1-223ENST00000545440 LRRC24Q50LG9 513 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 PDXDC2PQ6P474 469 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 ATF7IPQ6VMQ6 1270 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 CERS5Q8N5B7 392 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 TDRD7Q8NHU6 1098 aaKnown RBP9.57□□□□□ -0.88
SNHG1-223ENST00000545440 KLHDC4Q8TBB5 520 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 AIDAQ96BJ3 306 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 CDCA5Q96FF9 252 aa9.57□□□□□ -0.88
SNHG1-223ENST00000545440 ZBED3Q96IU2 234 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-223ENST00000545440 GBA2Q9HCG7 927 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-223ENST00000545440 MYO5AQ9Y4I1 1855 aaKnown RBP9.57□□□□□ -0.88
SNHG1-223ENST00000545440 CDK5RAP2Q96SN8 1893 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 CIAO1O76071 339 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 S1PR4O95977 384 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 HIBADHP31937 336 aaKnown RBP9.56□□□□□ -0.88
SNHG1-223ENST00000545440 MAP2K2P36507 400 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 GYG1P46976 350 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 HUNKP57058 714 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 FKBP1BP68106 108 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 PTPN12Q05209 780 aaKnown RBP9.56□□□□□ -0.88
SNHG1-223ENST00000545440 AGERQ15109 404 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 NBPF9Q3BBW0 867 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 CYP4F22Q6NT55 531 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 ZBTB33Q86T24 672 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 APOBEC3FQ8IUX4 373 aaKnown RBP9.56□□□□□ -0.88
SNHG1-223ENST00000545440 SPNS2Q8IVW8 549 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 FAM84BQ96KN1 310 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-223ENST00000545440 MEIS3Q99687 375 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
SNHG1-223ENST00000545440 LRRFIP2Q9Y608 721 aaKnown RBP9.56□□□□□ -0.88
SNHG1-223ENST00000545440 FOCADQ5VW36 1801 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 BCAR3O75815 825 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 GNAI3P08754 354 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 FGFR2P21802 821 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 MTX1Q13505 466 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 CAVIN4Q5BKX8 364 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 MFSD14BQ5SR56 506 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 DLK2Q6UY11 383 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 FBXO33Q7Z6M2 555 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 VPS37DQ86XT2 251 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 C2orf69Q8N8R5 385 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 ARHGAP9Q9BRR9 750 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
SNHG1-223ENST00000545440 POM121CA8CG34 1229 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 FOXN1O15353 648 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 MYO1BO43795 1136 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 IFIT1P09914 478 aaKnown RBP9.54□□□□□ -0.88
SNHG1-223ENST00000545440 SLC5A1P13866 664 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 CTCFP49711 727 aaPredicted RBP9.54□□□□□ -0.88
SNHG1-223ENST00000545440 NOGQ13253 232 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 GRM1Q13255 1194 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 DLGAP5Q15398 846 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 ZKSCAN2Q63HK3 967 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 RGMBQ6NW40 437 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 ATG9AQ7Z3C6 839 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 TBC1D22AQ8WUA7 517 aa9.54□□□□□ -0.88
SNHG1-223ENST00000545440 LPIN2Q92539 896 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms