RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 EHD4Q9H223 541 aa18.38■□□□□ 0.53
PDCD2-212ENST00000544755 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
PDCD2-212ENST00000544755 SNCAIPQ9Y6H5 919 aa18.38■□□□□ 0.53
PDCD2-212ENST00000544755 DDX60LQ5H9U9 1706 aaKnown RBP18.37■□□□□ 0.53
PDCD2-212ENST00000544755 PHF20L1A8MW92 1017 aa18.37■□□□□ 0.53
PDCD2-212ENST00000544755 RNF113AO15541 343 aaKnown RBP18.37■□□□□ 0.53
PDCD2-212ENST00000544755 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
PDCD2-212ENST00000544755 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
PDCD2-212ENST00000544755 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
PDCD2-212ENST00000544755 METTL16Q86W50 562 aaKnown RBP18.37■□□□□ 0.53
PDCD2-212ENST00000544755 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
PDCD2-212ENST00000544755 FSD1Q9BTV5 496 aa18.37■□□□□ 0.53
PDCD2-212ENST00000544755 OSBPL3Q9H4L5 887 aa18.37■□□□□ 0.53
PDCD2-212ENST00000544755 FOXN1O15353 648 aa18.36■□□□□ 0.53
PDCD2-212ENST00000544755 MBD4O95243 580 aa18.36■□□□□ 0.53
PDCD2-212ENST00000544755 GNAT2P19087 354 aa18.36■□□□□ 0.53
PDCD2-212ENST00000544755 INPP5BP32019 993 aa18.36■□□□□ 0.53
PDCD2-212ENST00000544755 SNAPC2Q13487 334 aa18.36■□□□□ 0.53
PDCD2-212ENST00000544755 TSHZ3Q63HK5 1081 aa18.36■□□□□ 0.53
PDCD2-212ENST00000544755 ZKSCAN4Q969J2 545 aaPredicted RBP18.36■□□□□ 0.53
PDCD2-212ENST00000544755 OTUD5Q96G74 571 aa18.36■□□□□ 0.53
PDCD2-212ENST00000544755 ZCCHC17Q9NP64 241 aaKnown RBP18.36■□□□□ 0.53
PDCD2-212ENST00000544755 SIPA1L1O43166 1804 aa18.35■□□□□ 0.53
PDCD2-212ENST00000544755 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
PDCD2-212ENST00000544755 TESPA1A2RU30 521 aaPredicted RBP18.35■□□□□ 0.53
PDCD2-212ENST00000544755 NEFLP07196 543 aa18.35■□□□□ 0.53
PDCD2-212ENST00000544755 CETPP11597 493 aa18.35■□□□□ 0.53
PDCD2-212ENST00000544755 NOM1Q5C9Z4 860 aaKnown RBP18.35■□□□□ 0.53
PDCD2-212ENST00000544755 ZIC5Q96T25 663 aa18.35■□□□□ 0.53
PDCD2-212ENST00000544755 CFHR5Q9BXR6 569 aa18.35■□□□□ 0.53
PDCD2-212ENST00000544755 SERPINB13Q9UIV8 391 aa18.35■□□□□ 0.53
PDCD2-212ENST00000544755 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
PDCD2-212ENST00000544755 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
PDCD2-212ENST00000544755 GIMAP6Q6P9H5 292 aa18.34■□□□□ 0.53
PDCD2-212ENST00000544755 LCORLQ8N3X6 602 aa18.34■□□□□ 0.53
PDCD2-212ENST00000544755 CXCL11O14625 94 aa18.33■□□□□ 0.52
PDCD2-212ENST00000544755 POLR3DP05423 398 aaPredicted RBP18.33■□□□□ 0.52
PDCD2-212ENST00000544755 ASNSP08243 561 aa18.33■□□□□ 0.52
PDCD2-212ENST00000544755 HSPA8P11142 646 aaKnown RBP18.33■□□□□ 0.52
PDCD2-212ENST00000544755 CAP2P40123 477 aa18.33■□□□□ 0.52
PDCD2-212ENST00000544755 IFNL1Q8IU54 200 aa18.33■□□□□ 0.52
PDCD2-212ENST00000544755 ARMT1Q9H993 441 aa18.33■□□□□ 0.52
PDCD2-212ENST00000544755 DCP1AQ9NPI6 582 aaPredicted RBP18.33■□□□□ 0.52
PDCD2-212ENST00000544755 RNF186Q9NXI6 227 aa18.33■□□□□ 0.52
PDCD2-212ENST00000544755 MCM9Q9NXL9 1143 aa18.33■□□□□ 0.52
PDCD2-212ENST00000544755 KCNH4Q9UQ05 1017 aa18.33■□□□□ 0.52
PDCD2-212ENST00000544755 TRPA1O75762 1119 aa18.32■□□□□ 0.52
PDCD2-212ENST00000544755 GJA5P36382 358 aa18.32■□□□□ 0.52
PDCD2-212ENST00000544755 PLEKHM2Q8IWE5 1019 aa18.32■□□□□ 0.52
PDCD2-212ENST00000544755 MS4A4AQ96JQ5 239 aa18.32■□□□□ 0.52
PDCD2-212ENST00000544755 AS3MTQ9HBK9 375 aa18.32■□□□□ 0.52
PDCD2-212ENST00000544755 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.32■□□□□ 0.52
PDCD2-212ENST00000544755 SAP30BPQ9UHR5 308 aaKnown RBP18.32■□□□□ 0.52
PDCD2-212ENST00000544755 MYH8P13535 1937 aa18.31■□□□□ 0.52
PDCD2-212ENST00000544755 CCL15-CCL14A0A0B4J2E2 113 aa18.31■□□□□ 0.52
PDCD2-212ENST00000544755 PTPRAP18433 802 aa18.31■□□□□ 0.52
PDCD2-212ENST00000544755 CCL15Q16663 113 aa18.31■□□□□ 0.52
PDCD2-212ENST00000544755 STRBPQ96SI9 672 aaKnown RBP18.31■□□□□ 0.52
PDCD2-212ENST00000544755 NACAP1Q9BZK3 213 aa18.31■□□□□ 0.52
PDCD2-212ENST00000544755 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
PDCD2-212ENST00000544755 ARPP21Q9UBL0 812 aaPredicted RBP18.31■□□□□ 0.52
PDCD2-212ENST00000544755 SWAP70Q9UH65 585 aa18.31■□□□□ 0.52
PDCD2-212ENST00000544755 SLC4A4Q9Y6R1 1079 aa18.31■□□□□ 0.52
PDCD2-212ENST00000544755 BAZ2AQ9UIF9 1905 aaKnown RBP18.3■□□□□ 0.52
PDCD2-212ENST00000544755 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
PDCD2-212ENST00000544755 HIP1O00291 1037 aa18.3■□□□□ 0.52
PDCD2-212ENST00000544755 IRF6O14896 467 aa18.3■□□□□ 0.52
PDCD2-212ENST00000544755 LBX1P52954 281 aa18.3■□□□□ 0.52
PDCD2-212ENST00000544755 ZMYM1Q5SVZ6 1142 aa18.3■□□□□ 0.52
PDCD2-212ENST00000544755 FASTKD5Q7L8L6 764 aaKnown RBP18.3■□□□□ 0.52
PDCD2-212ENST00000544755 SDR42E1Q8WUS8 393 aa18.3■□□□□ 0.52
PDCD2-212ENST00000544755 ZHX2Q9Y6X8 837 aa18.3■□□□□ 0.52
PDCD2-212ENST00000544755 PHIPQ8WWQ0 1821 aa18.3■□□□□ 0.52
PDCD2-212ENST00000544755 USP17L5A8MUK1 530 aa18.29■□□□□ 0.52
PDCD2-212ENST00000544755 GPAA1O43292 621 aa18.29■□□□□ 0.52
PDCD2-212ENST00000544755 TATDN1Q6P1N9 297 aa18.29■□□□□ 0.52
PDCD2-212ENST00000544755 CENPQQ7L2Z9 268 aaPredicted RBP18.29■□□□□ 0.52
PDCD2-212ENST00000544755 OSBP2Q969R2 916 aa18.29■□□□□ 0.52
PDCD2-212ENST00000544755 HELLSQ9NRZ9 838 aa18.29■□□□□ 0.52
PDCD2-212ENST00000544755 PTPRFP10586 1907 aa18.29■□□□□ 0.52
PDCD2-212ENST00000544755 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
PDCD2-212ENST00000544755 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
PDCD2-212ENST00000544755 BRI3BPQ8WY22 251 aa18.28■□□□□ 0.52
PDCD2-212ENST00000544755 ZNF287Q9HBT7 754 aa18.28■□□□□ 0.52
PDCD2-212ENST00000544755 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
PDCD2-212ENST00000544755 AFG3L2Q9Y4W6 797 aa18.28■□□□□ 0.52
PDCD2-212ENST00000544755 PCNTO95613 3336 aa18.28■□□□□ 0.52
PDCD2-212ENST00000544755 FAM196BA6NMK8 535 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 GABPAQ06546 454 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 SBK1Q52WX2 424 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 C12orf60Q5U649 245 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 ANKRD23Q86SG2 305 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 ZNF280CQ8ND82 737 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 WDR18Q9BV38 432 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 DNAJC18Q9H819 358 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
PDCD2-212ENST00000544755 A0A0G2JLL6 359 aaPredicted RBP18.26■□□□□ 0.51
PDCD2-212ENST00000544755 IGF2BP3O00425 579 aaKnown RBP eCLIP18.26■□□□□ 0.51
PDCD2-212ENST00000544755 PLCD1P51178 756 aa18.26■□□□□ 0.51
PDCD2-212ENST00000544755 CERKLQ49MI3 558 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms