RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ABCF2Q9UG63 623 aa19.24■□□□□ 0.67
CD4-212ENST00000544344 DDX60LQ5H9U9 1706 aaKnown RBP19.24■□□□□ 0.67
CD4-212ENST00000544344 TIMM10P62072 90 aa19.23■□□□□ 0.67
CD4-212ENST00000544344 MECOMQ03112 1051 aa19.23■□□□□ 0.67
CD4-212ENST00000544344 SPP2Q13103 211 aa19.23■□□□□ 0.67
CD4-212ENST00000544344 PNMA3Q9UL41 463 aa19.23■□□□□ 0.67
CD4-212ENST00000544344 HMGCRP04035 888 aa19.22■□□□□ 0.67
CD4-212ENST00000544344 GCLCP48506 637 aaPredicted RBP19.22■□□□□ 0.67
CD4-212ENST00000544344 ALDH1L2Q3SY69 923 aa19.22■□□□□ 0.67
CD4-212ENST00000544344 SLF2Q8IX21 1173 aa19.22■□□□□ 0.67
CD4-212ENST00000544344 C7orf61Q8IZ16 206 aa19.22■□□□□ 0.67
CD4-212ENST00000544344 OSBPL5Q9H0X9 879 aaPredicted RBP19.22■□□□□ 0.67
CD4-212ENST00000544344 ZMYND8Q9ULU4 1186 aaPredicted RBP19.22■□□□□ 0.67
CD4-212ENST00000544344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.22■□□□□ 0.67
CD4-212ENST00000544344 COL2A1P02458 1487 aaPredicted RBP19.22■□□□□ 0.67
CD4-212ENST00000544344 E9PSI1 815 aa19.21■□□□□ 0.67
CD4-212ENST00000544344 HMGCS2P54868 508 aa19.21■□□□□ 0.67
CD4-212ENST00000544344 SLFN5Q08AF3 891 aa19.21■□□□□ 0.67
CD4-212ENST00000544344 ZNF280CQ8ND82 737 aa19.21■□□□□ 0.67
CD4-212ENST00000544344 ASCC2Q9H1I8 757 aaPredicted RBP19.21■□□□□ 0.67
CD4-212ENST00000544344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.21■□□□□ 0.67
CD4-212ENST00000544344 RPTORQ8N122 1335 aa19.21■□□□□ 0.67
CD4-212ENST00000544344 SIPA1L1O43166 1804 aa19.21■□□□□ 0.67
CD4-212ENST00000544344 SH3D19Q5HYK7 790 aa19.2■□□□□ 0.66
CD4-212ENST00000544344 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
CD4-212ENST00000544344 GPR153Q6NV75 609 aa19.2■□□□□ 0.66
CD4-212ENST00000544344 XAGE2Q96GT9 111 aa19.2■□□□□ 0.66
CD4-212ENST00000544344 NBPF3Q9H094 633 aa19.2■□□□□ 0.66
CD4-212ENST00000544344 A0A1B0GUL7 405 aa19.19■□□□□ 0.66
CD4-212ENST00000544344 CAP2P40123 477 aa19.19■□□□□ 0.66
CD4-212ENST00000544344 MAP3K21Q5TCX8 1036 aa19.19■□□□□ 0.66
CD4-212ENST00000544344 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
CD4-212ENST00000544344 TRIB2Q92519 343 aa19.19■□□□□ 0.66
CD4-212ENST00000544344 HMX1Q9NP08 348 aaPredicted RBP19.19■□□□□ 0.66
CD4-212ENST00000544344 MORF4L1Q9UBU8 362 aa19.19■□□□□ 0.66
CD4-212ENST00000544344 OGDHLQ9ULD0 1010 aa19.19■□□□□ 0.66
CD4-212ENST00000544344 SYN1P17600 705 aa19.18■□□□□ 0.66
CD4-212ENST00000544344 LRIT3Q3SXY7 679 aa19.18■□□□□ 0.66
CD4-212ENST00000544344 PI16Q6UXB8 463 aa19.18■□□□□ 0.66
CD4-212ENST00000544344 NSUN4Q96CB9 384 aaKnown RBP19.18■□□□□ 0.66
CD4-212ENST00000544344 TBC1D2Q9BYX2 928 aa19.18■□□□□ 0.66
CD4-212ENST00000544344 SMC4Q9NTJ3 1288 aa19.18■□□□□ 0.66
CD4-212ENST00000544344 HMG20BQ9P0W2 317 aa19.18■□□□□ 0.66
CD4-212ENST00000544344 PEX10O60683 326 aa19.17■□□□□ 0.66
CD4-212ENST00000544344 MAGEA10P43363 369 aaPredicted RBP19.17■□□□□ 0.66
CD4-212ENST00000544344 TFCP2Q12800 502 aa19.17■□□□□ 0.66
CD4-212ENST00000544344 TBC1D9Q6ZT07 1266 aa19.17■□□□□ 0.66
CD4-212ENST00000544344 Q7L0L9 218 aa19.17■□□□□ 0.66
CD4-212ENST00000544344 DEFB123Q8N688 67 aa19.17■□□□□ 0.66
CD4-212ENST00000544344 MEIS3Q99687 375 aa19.17■□□□□ 0.66
CD4-212ENST00000544344 C11orf49Q9H6J7 331 aa19.17■□□□□ 0.66
CD4-212ENST00000544344 PFASO15067 1338 aa19.17■□□□□ 0.66
CD4-212ENST00000544344 USP17L5A8MUK1 530 aa19.16■□□□□ 0.66
CD4-212ENST00000544344 MAP4K4O95819 1239 aaPredicted RBP19.16■□□□□ 0.66
CD4-212ENST00000544344 JAG1P78504 1218 aa19.16■□□□□ 0.66
CD4-212ENST00000544344 PABPC4Q13310 644 aaKnown RBP eCLIP19.16■□□□□ 0.66
CD4-212ENST00000544344 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
CD4-212ENST00000544344 CDCA7LQ96GN5 454 aa19.16■□□□□ 0.66
CD4-212ENST00000544344 NOB1Q9ULX3 412 aaKnown RBP19.16■□□□□ 0.66
CD4-212ENST00000544344 UNC80Q8N2C7 3258 aa19.15■□□□□ 0.66
CD4-212ENST00000544344 TDHQ8IZJ6 230 aa19.15■□□□□ 0.66
CD4-212ENST00000544344 WDR18Q9BV38 432 aa19.15■□□□□ 0.66
CD4-212ENST00000544344 TXNRD2Q9NNW7 524 aa19.15■□□□□ 0.66
CD4-212ENST00000544344 COL6A1P12109 1028 aa19.14■□□□□ 0.65
CD4-212ENST00000544344 PRKAR2AP13861 404 aaKnown RBP19.14■□□□□ 0.65
CD4-212ENST00000544344 CYP2B6P20813 491 aa19.14■□□□□ 0.65
CD4-212ENST00000544344 HOXA7P31268 230 aaPredicted RBP19.14■□□□□ 0.65
CD4-212ENST00000544344 TRMT2AQ8IZ69 625 aaKnown RBP19.14■□□□□ 0.65
CD4-212ENST00000544344 SPATA5Q8NB90 893 aa19.14■□□□□ 0.65
CD4-212ENST00000544344 P2RX7Q99572 595 aaKnown RBP19.14■□□□□ 0.65
CD4-212ENST00000544344 MTMR10Q9NXD2 777 aa19.14■□□□□ 0.65
CD4-212ENST00000544344 HERC5Q9UII4 1024 aaKnown RBP19.14■□□□□ 0.65
CD4-212ENST00000544344 AKAP2Q9Y2D5 859 aa19.14■□□□□ 0.65
CD4-212ENST00000544344 STXBP5LQ9Y2K9 1186 aa19.14■□□□□ 0.65
CD4-212ENST00000544344 CDK5RAP2Q96SN8 1893 aa19.14■□□□□ 0.65
CD4-212ENST00000544344 LDHCP07864 332 aa19.13■□□□□ 0.65
CD4-212ENST00000544344 XRCC5P13010 732 aaKnown RBP19.13■□□□□ 0.65
CD4-212ENST00000544344 BACE1P56817 501 aa19.13■□□□□ 0.65
CD4-212ENST00000544344 GSTO1P78417 241 aa19.13■□□□□ 0.65
CD4-212ENST00000544344 MTX1Q13505 466 aa19.13■□□□□ 0.65
CD4-212ENST00000544344 MTMR2Q13614 643 aa19.13■□□□□ 0.65
CD4-212ENST00000544344 SHROOM1Q2M3G4 852 aaPredicted RBP19.13■□□□□ 0.65
CD4-212ENST00000544344 POTEEQ6S8J3 1075 aa19.13■□□□□ 0.65
CD4-212ENST00000544344 USP6NLQ92738 828 aa19.13■□□□□ 0.65
CD4-212ENST00000544344 HDAC5Q9UQL6 1122 aa19.13■□□□□ 0.65
CD4-212ENST00000544344 ARID4AP29374 1257 aaPredicted RBP19.12■□□□□ 0.65
CD4-212ENST00000544344 TEX11Q8IYF3 940 aa19.12■□□□□ 0.65
CD4-212ENST00000544344 SH3RF3Q8TEJ3 882 aaPredicted RBP19.12■□□□□ 0.65
CD4-212ENST00000544344 DNAJC18Q9H819 358 aa19.12■□□□□ 0.65
CD4-212ENST00000544344 AS3MTQ9HBK9 375 aa19.12■□□□□ 0.65
CD4-212ENST00000544344 RBPJLQ9UBG7 517 aa19.12■□□□□ 0.65
CD4-212ENST00000544344 LAMA2P24043 3122 aaKnown RBP19.12■□□□□ 0.65
CD4-212ENST00000544344 DNAH12Q6ZR08 3092 aa19.12■□□□□ 0.65
CD4-212ENST00000544344 FOCADQ5VW36 1801 aa19.11■□□□□ 0.65
CD4-212ENST00000544344 SRGAP3O43295 1099 aa19.11■□□□□ 0.65
CD4-212ENST00000544344 MCAMP43121 646 aa19.11■□□□□ 0.65
CD4-212ENST00000544344 HERVK_113P62684 666 aa19.11■□□□□ 0.65
CD4-212ENST00000544344 CACNB2Q08289 660 aaPredicted RBP19.11■□□□□ 0.65
CD4-212ENST00000544344 Q3C1V9 767 aa19.11■□□□□ 0.65
CD4-212ENST00000544344 LHX8Q68G74 356 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms