RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 LEFTY1O75610 366 aa6.28□□□□□ -1.4
CCDC170-203ENST00000544131 FGD1P98174 961 aa6.28□□□□□ -1.4
CCDC170-203ENST00000544131 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
CCDC170-203ENST00000544131 ANKRD24Q8TF21 1146 aa6.28□□□□□ -1.4
CCDC170-203ENST00000544131 ELMO3Q96BJ8 720 aa6.27□□□□□ -1.41
CCDC170-203ENST00000544131 GZF1Q9H116 711 aaPredicted RBP6.27□□□□□ -1.41
CCDC170-203ENST00000544131 PARP2Q9UGN5 583 aa6.27□□□□□ -1.41
CCDC170-203ENST00000544131 PTPN11Q06124 597 aaPredicted RBP6.26□□□□□ -1.41
CCDC170-203ENST00000544131 BNIP3Q12983 259 aa6.26□□□□□ -1.41
CCDC170-203ENST00000544131 PSMD2Q13200 908 aa6.26□□□□□ -1.41
CCDC170-203ENST00000544131 INPP5AQ14642 412 aa6.26□□□□□ -1.41
CCDC170-203ENST00000544131 CCDC85BQ15834 202 aaPredicted RBP6.26□□□□□ -1.41
CCDC170-203ENST00000544131 MAP3K11Q16584 847 aa6.26□□□□□ -1.41
CCDC170-203ENST00000544131 TTBK2Q6IQ55 1244 aa6.26□□□□□ -1.41
CCDC170-203ENST00000544131 DNAJC14Q6Y2X3 702 aaPredicted RBP6.26□□□□□ -1.41
CCDC170-203ENST00000544131 NPAS4Q8IUM7 802 aa6.26□□□□□ -1.41
CCDC170-203ENST00000544131 TOP6BLQ8N6T0 577 aa6.26□□□□□ -1.41
CCDC170-203ENST00000544131 FAM181AQ8N9Y4 354 aa6.26□□□□□ -1.41
CCDC170-203ENST00000544131 DBX1A6NMT0 343 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 LMNB1P20700 586 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 XPCQ01831 940 aaPredicted RBP6.25□□□□□ -1.41
CCDC170-203ENST00000544131 SPOCD1Q6ZMY3 1216 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 ARHGAP27Q6ZUM4 889 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 CDC37L1Q7L3B6 337 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 UBE3DQ7Z6J8 389 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 ATG4DQ86TL0 474 aaPredicted RBP6.25□□□□□ -1.41
CCDC170-203ENST00000544131 PLD6Q8N2A8 252 aaKnown RBP6.25□□□□□ -1.41
CCDC170-203ENST00000544131 MISP3Q96FF7 219 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 DUSP23Q9BVJ7 150 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 RC3H2Q9HBD1 1191 aaKnown RBP6.25□□□□□ -1.41
CCDC170-203ENST00000544131 ADAMTS6Q9UKP5 1117 aa6.25□□□□□ -1.41
CCDC170-203ENST00000544131 PRAMEF27A3QJZ7 478 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 FANCGO15287 622 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 FARP2O94887 1054 aaPredicted RBP6.24□□□□□ -1.41
CCDC170-203ENST00000544131 FUT4P22083 530 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 RING1Q06587 406 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 ZBTB37Q5TC79 503 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 MEI1Q5TIA1 1274 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 LRFN4Q6PJG9 635 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.24□□□□□ -1.41
CCDC170-203ENST00000544131 NETO1Q8TDF5 533 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 FAM168AQ92567 244 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 FAM161BQ96MY7 647 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 PCDHB5Q9Y5E4 795 aa6.24□□□□□ -1.41
CCDC170-203ENST00000544131 RNASE1P07998 156 aaKnown RBP6.23□□□□□ -1.41
CCDC170-203ENST00000544131 CD8BP10966 210 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 NTF4P34130 210 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 CDK8P49336 464 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 DAB2P98082 770 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 PKN1Q16512 942 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 SCARA3Q6AZY7 606 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 HDXQ7Z353 690 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 PLPPR2Q96GM1 343 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 MBNL3Q9NUK0 354 aaKnown RBP6.23□□□□□ -1.41
CCDC170-203ENST00000544131 U3KQE9 123 aa6.23□□□□□ -1.41
CCDC170-203ENST00000544131 CD96P40200 585 aa6.22□□□□□ -1.41
CCDC170-203ENST00000544131 TAGLNQ01995 201 aaKnown RBP6.22□□□□□ -1.41
CCDC170-203ENST00000544131 SEPT6Q14141 434 aa6.22□□□□□ -1.41
CCDC170-203ENST00000544131 CCDC27Q2M243 656 aa6.22□□□□□ -1.41
CCDC170-203ENST00000544131 FBLN7Q53RD9 439 aa6.22□□□□□ -1.41
CCDC170-203ENST00000544131 WIPI1Q5MNZ9 446 aaPredicted RBP6.22□□□□□ -1.41
CCDC170-203ENST00000544131 ZNF507Q8TCN5 953 aa6.22□□□□□ -1.41
CCDC170-203ENST00000544131 GAL3ST3Q96A11 431 aa6.22□□□□□ -1.41
CCDC170-203ENST00000544131 PRDM10Q9NQV6 1147 aa6.22□□□□□ -1.41
CCDC170-203ENST00000544131 ITIH2P19823 946 aa6.21□□□□□ -1.42
CCDC170-203ENST00000544131 LIG3P49916 1009 aa6.21□□□□□ -1.42
CCDC170-203ENST00000544131 TAF1CQ15572 869 aaPredicted RBP6.21□□□□□ -1.42
CCDC170-203ENST00000544131 CYFIP1Q7L576 1253 aa6.21□□□□□ -1.42
CCDC170-203ENST00000544131 FBXO33Q7Z6M2 555 aa6.21□□□□□ -1.42
CCDC170-203ENST00000544131 KSR1Q8IVT5 923 aa6.21□□□□□ -1.42
CCDC170-203ENST00000544131 KCT2Q8NC54 265 aa6.21□□□□□ -1.42
CCDC170-203ENST00000544131 LRRN4CLQ8ND94 238 aa6.21□□□□□ -1.42
CCDC170-203ENST00000544131 OXCT1P55809 520 aa6.2□□□□□ -1.42
CCDC170-203ENST00000544131 ETF1P62495 437 aaKnown RBP6.2□□□□□ -1.42
CCDC170-203ENST00000544131 RPS26P62854 115 aaKnown RBP6.2□□□□□ -1.42
CCDC170-203ENST00000544131 AGMOQ6ZNB7 445 aa6.2□□□□□ -1.42
CCDC170-203ENST00000544131 TMC4Q7Z404 712 aa6.2□□□□□ -1.42
CCDC170-203ENST00000544131 PI4K2BQ8TCG2 481 aa6.2□□□□□ -1.42
CCDC170-203ENST00000544131 TMEM40Q8WWA1 233 aa6.2□□□□□ -1.42
CCDC170-203ENST00000544131 JARID2Q92833 1246 aaPredicted RBP6.2□□□□□ -1.42
CCDC170-203ENST00000544131 HEXIM2Q96MH2 286 aaKnown RBP6.2□□□□□ -1.42
CCDC170-203ENST00000544131 VAV3Q9UKW4 847 aa6.2□□□□□ -1.42
CCDC170-203ENST00000544131 TLR6Q9Y2C9 796 aa6.2□□□□□ -1.42
CCDC170-203ENST00000544131 SNCAIPQ9Y6H5 919 aa6.2□□□□□ -1.42
CCDC170-203ENST00000544131 CTSHP09668 335 aa6.19□□□□□ -1.42
CCDC170-203ENST00000544131 TFE3P19532 575 aaPredicted RBP6.19□□□□□ -1.42
CCDC170-203ENST00000544131 PRKCQQ04759 706 aa6.19□□□□□ -1.42
CCDC170-203ENST00000544131 IFI16Q16666 785 aaKnown RBP6.19□□□□□ -1.42
CCDC170-203ENST00000544131 ARMCX6Q7L4S7 300 aa6.19□□□□□ -1.42
CCDC170-203ENST00000544131 WNT10AQ9GZT5 417 aa6.19□□□□□ -1.42
CCDC170-203ENST00000544131 FBRSQ9HAH7 460 aa6.19□□□□□ -1.42
CCDC170-203ENST00000544131 GTF2IRD1Q9UHL9 959 aa6.19□□□□□ -1.42
CCDC170-203ENST00000544131 PLAGL2Q9UPG8 496 aa6.19□□□□□ -1.42
CCDC170-203ENST00000544131 F6X3S4 739 aa6.18□□□□□ -1.42
CCDC170-203ENST00000544131 SORBS3O60504 671 aa6.18□□□□□ -1.42
CCDC170-203ENST00000544131 CEACAM5P06731 702 aa6.18□□□□□ -1.42
CCDC170-203ENST00000544131 NKG7Q16617 165 aa6.18□□□□□ -1.42
CCDC170-203ENST00000544131 AOC3Q16853 763 aa6.18□□□□□ -1.42
CCDC170-203ENST00000544131 FAM214BQ7L5A3 538 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms