RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 EVX2Q03828 476 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 CTR9Q6PD62 1173 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 ARMC9Q7Z3E5 817 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 FOXP4Q8IVH2 680 aaPredicted RBP16.29■□□□□ 0.2
SP140-213ENST00000543928 AMOTL1Q8IY63 956 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 ZNF341Q9BYN7 854 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 NAPBQ9H115 298 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
SP140-213ENST00000543928 SIPA1L1O43166 1804 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 FAM196BA6NMK8 535 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 HSPA6P17066 643 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 IREB2P48200 963 aaKnown RBP16.28■□□□□ 0.2
SP140-213ENST00000543928 MAP3K10Q02779 954 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
SP140-213ENST00000543928 ESYT1Q9BSJ8 1104 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 EHD4Q9H223 541 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.28■□□□□ 0.2
SP140-213ENST00000543928 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 ABT1Q9ULW3 272 aaKnown RBP16.28■□□□□ 0.2
SP140-213ENST00000543928 TLL2Q9Y6L7 1015 aa16.28■□□□□ 0.2
SP140-213ENST00000543928 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.2
SP140-213ENST00000543928 TBC1D12O60347 775 aa16.27■□□□□ 0.2
SP140-213ENST00000543928 HUNKP57058 714 aa16.27■□□□□ 0.2
SP140-213ENST00000543928 SBK1Q52WX2 424 aa16.27■□□□□ 0.2
SP140-213ENST00000543928 SAPCD2Q86UD0 394 aa16.27■□□□□ 0.2
SP140-213ENST00000543928 METTL16Q86W50 562 aaKnown RBP16.27■□□□□ 0.2
SP140-213ENST00000543928 KLRG1Q96E93 195 aa16.27■□□□□ 0.2
SP140-213ENST00000543928 DNAJC18Q9H819 358 aa16.27■□□□□ 0.2
SP140-213ENST00000543928 HERC5Q9UII4 1024 aaKnown RBP16.27■□□□□ 0.2
SP140-213ENST00000543928 SERPINB13Q9UIV8 391 aa16.27■□□□□ 0.2
SP140-213ENST00000543928 SMIM22K7EJ46 135 aa16.26■□□□□ 0.19
SP140-213ENST00000543928 FGAP02671 866 aa16.26■□□□□ 0.19
SP140-213ENST00000543928 HTRA3P83110 453 aa16.26■□□□□ 0.19
SP140-213ENST00000543928 ALX1Q15699 326 aa16.26■□□□□ 0.19
SP140-213ENST00000543928 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.26■□□□□ 0.19
SP140-213ENST00000543928 WRNIP1Q96S55 665 aa16.26■□□□□ 0.19
SP140-213ENST00000543928 DSCC1Q9BVC3 393 aa16.26■□□□□ 0.19
SP140-213ENST00000543928 MAP3K9P80192 1104 aa16.25■□□□□ 0.19
SP140-213ENST00000543928 LDLRAD1Q5T700 205 aa16.25■□□□□ 0.19
SP140-213ENST00000543928 DYNLL2Q96FJ2 89 aa16.25■□□□□ 0.19
SP140-213ENST00000543928 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.25■□□□□ 0.19
SP140-213ENST00000543928 ZNF112Q9UJU3 913 aa16.25■□□□□ 0.19
SP140-213ENST00000543928 ZMYM6O95789 1325 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 OTOFQ9HC10 1997 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 PHF20L1A8MW92 1017 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 INPP5BP32019 993 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 PTH1RQ03431 593 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 GABPAQ06546 454 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 PPARAQ07869 468 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.24■□□□□ 0.19
SP140-213ENST00000543928 KIAA1211Q6ZU35 1233 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 ANKRD13AQ8IZ07 590 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 ZKSCAN4Q969J2 545 aaPredicted RBP16.24■□□□□ 0.19
SP140-213ENST00000543928 CLMNQ96JQ2 1002 aa16.24■□□□□ 0.19
SP140-213ENST00000543928 LAMB1P07942 1786 aa16.23■□□□□ 0.19
SP140-213ENST00000543928 SHMT1P34896 483 aa16.23■□□□□ 0.19
SP140-213ENST00000543928 VGLL4Q14135 290 aa16.23■□□□□ 0.19
SP140-213ENST00000543928 STK11IPQ8N1F8 1099 aa16.23■□□□□ 0.19
SP140-213ENST00000543928 SLC44A5Q8NCS7 719 aa16.23■□□□□ 0.19
SP140-213ENST00000543928 SWAP70Q9UH65 585 aa16.23■□□□□ 0.19
SP140-213ENST00000543928 CSADQ9Y600 493 aa16.23■□□□□ 0.19
SP140-213ENST00000543928 ROBO3Q96MS0 1386 aa16.23■□□□□ 0.19
SP140-213ENST00000543928 UNCXA6NJT0 531 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 RASSF10A6NK89 507 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 CDK8P49336 464 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 RRP1BQ14684 758 aaKnown RBP16.22■□□□□ 0.19
SP140-213ENST00000543928 RGMBQ6NW40 437 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 TATDN1Q6P1N9 297 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 C16orf86Q6ZW13 317 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
SP140-213ENST00000543928 HHIPL1Q96JK4 782 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 LSG1Q9H089 658 aaKnown RBP16.22■□□□□ 0.19
SP140-213ENST00000543928 ELP3Q9H9T3 547 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 ANO2Q9NQ90 1003 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 TAOK2Q9UL54 1235 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 SNCAIPQ9Y6H5 919 aa16.22■□□□□ 0.19
SP140-213ENST00000543928 CTNND1O60716 968 aaKnown RBP16.21■□□□□ 0.19
SP140-213ENST00000543928 SLC3A2P08195 630 aaKnown RBP16.21■□□□□ 0.19
SP140-213ENST00000543928 CAP2P40123 477 aa16.21■□□□□ 0.19
SP140-213ENST00000543928 ZNF157P51786 506 aaPredicted RBP16.21■□□□□ 0.19
SP140-213ENST00000543928 HAND2P61296 217 aa16.21■□□□□ 0.19
SP140-213ENST00000543928 CTDSPL2Q05D32 466 aa16.21■□□□□ 0.19
SP140-213ENST00000543928 DEFB115Q30KQ5 88 aa16.21■□□□□ 0.19
SP140-213ENST00000543928 NOL9Q5SY16 702 aaKnown RBP16.21■□□□□ 0.19
SP140-213ENST00000543928 SCYL3Q8IZE3 742 aa16.21■□□□□ 0.19
SP140-213ENST00000543928 SLC10A4Q96EP9 437 aa16.21■□□□□ 0.19
SP140-213ENST00000543928 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
SP140-213ENST00000543928 ANAPC4Q9UJX5 808 aa16.21■□□□□ 0.19
SP140-213ENST00000543928 GDF11O95390 407 aa16.2■□□□□ 0.18
SP140-213ENST00000543928 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
SP140-213ENST00000543928 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
SP140-213ENST00000543928 MAP4K1Q92918 833 aa16.2■□□□□ 0.18
SP140-213ENST00000543928 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
SP140-213ENST00000543928 DOCK1Q14185 1865 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 ZNF213O14771 459 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms