RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 NLRP3Q96P20 1036 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 CLIP2Q9UDT6 1046 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 HPSEQ9Y251 543 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 MYH13Q9UKX3 1938 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 MMP1P03956 469 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 DNTTIP2Q5QJE6 756 aaKnown RBP18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 SHC4Q6S5L8 630 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 CRACR2BQ8N4Y2 399 aaPredicted RBP18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 FANCBQ8NB91 859 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 MRFAP1L1Q96HT8 127 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 FAM13BQ9NYF5 915 aa18.61■□□□□ 0.57
SCNN1A-221ENST00000543768 UQCRHLA0A096LP55 91 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 UQCRHP07919 91 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 SLC3A2P08195 630 aaKnown RBP18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 ESR2Q92731 530 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 FAM237AA0A1B0GTK4 181 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 BTBD18B2RXH4 712 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 SEMA3EO15041 775 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 LRMPQ12912 555 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 DPCR1Q3MIW9 517 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 CCDC144BQ3MJ40 725 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 AMIGO3Q86WK7 504 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 NBPF5PQ86XG9 351 aaPredicted RBP18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 NOSTRINQ8IVI9 506 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 TRIM22Q8IYM9 498 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 CMTR1Q8N1G2 835 aaKnown RBP18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 AOPEPQ8N6M6 819 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 JMYQ8N9B5 988 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 FBXW7Q969H0 707 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 TIGD1Q96MW7 591 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 UBAC1Q9BSL1 405 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 NAT10Q9H0A0 1025 aaKnown RBP18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 DUOX1Q9NRD9 1551 aa18.6■□□□□ 0.57
SCNN1A-221ENST00000543768 TNKSO95271 1327 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 CYP2D7A0A087X1C5 515 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 CCDC196A0A1B0GTZ2 297 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 GNPATO15228 680 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 FNBP4Q8N3X1 1017 aaPredicted RBP18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 CCDC24Q8N4L8 307 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 CCDC82Q8N4S0 544 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 NSUN4Q96CB9 384 aaKnown RBP18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 KCNJ14Q9UNX9 436 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 MYH6P13533 1939 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 ZPR1O75312 459 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 DEXIO95424 95 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 SYKP43405 635 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 RBM6P78332 1123 aaKnown RBP18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 BPIFA3Q9BQP9 254 aa18.59■□□□□ 0.57
SCNN1A-221ENST00000543768 FGRP09769 529 aa18.58■□□□□ 0.56
SCNN1A-221ENST00000543768 TOB1P50616 345 aaPredicted RBP18.58■□□□□ 0.56
SCNN1A-221ENST00000543768 RESP18Q5W5W9 173 aa18.58■□□□□ 0.56
SCNN1A-221ENST00000543768 MTERF4Q7Z6M4 381 aaKnown RBP18.58■□□□□ 0.56
SCNN1A-221ENST00000543768 DIS3L2Q8IYB7 885 aaKnown RBP18.58■□□□□ 0.56
SCNN1A-221ENST00000543768 CLIC6Q96NY7 704 aa18.58■□□□□ 0.56
SCNN1A-221ENST00000543768 PDS5AQ29RF7 1337 aaKnown RBP18.58■□□□□ 0.56
SCNN1A-221ENST00000543768 TM4SF1P30408 202 aa18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 NLRP12P59046 1061 aa18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 ENAHQ8N8S7 591 aaPredicted RBP18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 NHSQ6T4R5 1651 aa18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 MECOMQ03112 1051 aa18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 CTR9Q6PD62 1173 aa18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 TPTE2Q6XPS3 522 aa18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 CACTINQ8WUQ7 758 aaKnown RBP18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 FOXP1Q9H334 677 aaPredicted RBP18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 TFCP2L1Q9NZI6 479 aa18.57■□□□□ 0.56
SCNN1A-221ENST00000543768 CUTAO60888 179 aa18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 HIBADHP31937 336 aaKnown RBP18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 SAFBQ15424 915 aaKnown RBP eCLIP18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 ARHGEF1Q92888 912 aaKnown RBP18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 ZSCAN10Q96SZ4 725 aaPredicted RBP18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 ANKRD2Q9GZV1 360 aa18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 CCNL1Q9UK58 526 aaPredicted RBP18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 RTCBQ9Y3I0 505 aaKnown RBP18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 TAF1LQ8IZX4 1826 aa18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 BIN1O00499 593 aa18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 PPP2R5BQ15173 497 aa18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 DLEC1Q9Y238 1755 aa18.56■□□□□ 0.56
SCNN1A-221ENST00000543768 ZRSR1Q15695 479 aaKnown RBP18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 TUBE1Q9UJT0 475 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 THSD7AQ9UPZ6 1657 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 USP17L21D6R901 530 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 DYNC1I1O14576 645 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 PRDM1O75626 825 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 NR5A1Q13285 461 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 SHISA4Q96DD7 197 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 PRIMPOLQ96LW4 560 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 RNF26Q9BY78 433 aaPredicted RBP18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 IRS2Q9Y4H2 1338 aa18.55■□□□□ 0.56
SCNN1A-221ENST00000543768 PCP11498 1178 aaKnown RBP18.54■□□□□ 0.56
SCNN1A-221ENST00000543768 PRDX5P30044 214 aa18.54■□□□□ 0.56
SCNN1A-221ENST00000543768 EVX2Q03828 476 aa18.54■□□□□ 0.56
SCNN1A-221ENST00000543768 FUT2Q10981 343 aa18.54■□□□□ 0.56
SCNN1A-221ENST00000543768 SMAP1Q8IYB5 467 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms