RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 DCAF15Q66K64 600 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 RGMBQ6NW40 437 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 CCDC129Q6ZRS4 1044 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 ARMC9Q7Z3E5 817 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 JMYQ8N9B5 988 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 ZNF341Q9BYN7 854 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 PI4KBQ9UBF8 816 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 HERC5Q9UII4 1024 aaKnown RBP11.92□□□□□ -0.5
VEGFB-204ENST00000543462 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 ABT1Q9ULW3 272 aaKnown RBP11.92□□□□□ -0.5
VEGFB-204ENST00000543462 MYH4Q9Y623 1939 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 CCDC171Q6TFL3 1326 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 RAD50Q92878 1312 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 FAM196BA6NMK8 535 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 CYP2D6P10635 497 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 GNAT2P19087 354 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 CHMLP26374 656 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 INPP5BP32019 993 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 USP5P45974 858 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 IREB2P48200 963 aaKnown RBP11.91□□□□□ -0.5
VEGFB-204ENST00000543462 VEGFBP49765 207 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 PLCD1P51178 756 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 DEFB115Q30KQ5 88 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 MCMDC2Q4G0Z9 681 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 SBK1Q52WX2 424 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 MIGA2Q7L4E1 593 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 ANKRD13AQ8IZ07 590 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 CAPNS2Q96L46 248 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 WRNIP1Q96S55 665 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 SAP30BPQ9UHR5 308 aaKnown RBP11.91□□□□□ -0.5
VEGFB-204ENST00000543462 SLC4A4Q9Y6R1 1079 aa11.91□□□□□ -0.5
VEGFB-204ENST00000543462 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 SHMT1P34896 483 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 JAG1P78504 1218 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 MAP3K9P80192 1104 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 PRKG1Q13976 671 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 ALX1Q15699 326 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 C12orf60Q5U649 245 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 CYP4F22Q6NT55 531 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 TATDN1Q6P1N9 297 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 CTR9Q6PD62 1173 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 WNK4Q96J92 1243 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 SERPINB13Q9UIV8 391 aa11.9□□□□□ -0.5
VEGFB-204ENST00000543462 RLFQ13129 1914 aa11.9□□□□□ -0.51
VEGFB-204ENST00000543462 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
VEGFB-204ENST00000543462 CYP2D7A0A087X1C5 515 aa11.89□□□□□ -0.51
VEGFB-204ENST00000543462 USP17L12C9JPN9 530 aa11.89□□□□□ -0.51
VEGFB-204ENST00000543462 USP17L21D6R901 530 aa11.89□□□□□ -0.51
VEGFB-204ENST00000543462 HIP1O00291 1037 aa11.89□□□□□ -0.51
VEGFB-204ENST00000543462 SPRYD7Q5W111 196 aa11.89□□□□□ -0.51
VEGFB-204ENST00000543462 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
VEGFB-204ENST00000543462 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
VEGFB-204ENST00000543462 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
VEGFB-204ENST00000543462 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
VEGFB-204ENST00000543462 ZIC5Q96T25 663 aa11.89□□□□□ -0.51
VEGFB-204ENST00000543462 MCM9Q9NXL9 1143 aa11.89□□□□□ -0.51
VEGFB-204ENST00000543462 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
VEGFB-204ENST00000543462 PATL2C9JE40 543 aaKnown RBP11.88□□□□□ -0.51
VEGFB-204ENST00000543462 CTNND1O60716 968 aaKnown RBP11.88□□□□□ -0.51
VEGFB-204ENST00000543462 HLA-DOAP06340 250 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 ZBTB48P10074 688 aaPredicted RBP11.88□□□□□ -0.51
VEGFB-204ENST00000543462 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
VEGFB-204ENST00000543462 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
VEGFB-204ENST00000543462 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 C16orf86Q6ZW13 317 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 TTC6Q86TZ1 520 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 SCYL3Q8IZE3 742 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 IFNL3Q8IZI9 196 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 DIAPH3Q9NSV4 1193 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 PLIN4Q96Q06 1357 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 A0A0G2JMZ2 1700 aa11.88□□□□□ -0.51
VEGFB-204ENST00000543462 SGSM2O43147 1006 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 AOC2O75106 756 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 HSPD1P10809 573 aaKnown RBP11.87□□□□□ -0.51
VEGFB-204ENST00000543462 CAP2P40123 477 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 ECE1P42892 770 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
VEGFB-204ENST00000543462 NOGQ13253 232 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 PPIL2Q13356 520 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 CWC27Q6UX04 472 aaKnown RBP11.87□□□□□ -0.51
VEGFB-204ENST00000543462 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 SLC44A5Q8NCS7 719 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 MS4A4AQ96JQ5 239 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 ELP3Q9H9T3 547 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.87□□□□□ -0.51
VEGFB-204ENST00000543462 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.87□□□□□ -0.51
VEGFB-204ENST00000543462 ANAPC4Q9UJX5 808 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 KCNH4Q9UQ05 1017 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
VEGFB-204ENST00000543462 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
VEGFB-204ENST00000543462 FGRP09769 529 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 PTPRAP18433 802 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 GUCY1A2P33402 732 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 MAP2K2P36507 400 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 MOGSQ13724 837 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 OPTNQ96CV9 577 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms