RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 MORC2Q9Y6X9 1032 aaPredicted RBP19.09■□□□□ 0.65
KDM2B-216ENST00000543025 MYO5AQ9Y4I1 1855 aaKnown RBP19.09■□□□□ 0.65
KDM2B-216ENST00000543025 MYO1BO43795 1136 aa19.09■□□□□ 0.65
KDM2B-216ENST00000543025 SYT10Q6XYQ8 523 aa19.09■□□□□ 0.65
KDM2B-216ENST00000543025 CLIC6Q96NY7 704 aa19.09■□□□□ 0.65
KDM2B-216ENST00000543025 FAM217BQ9NTX9 383 aaPredicted RBP19.09■□□□□ 0.65
KDM2B-216ENST00000543025 CCNL1Q9UK58 526 aaPredicted RBP19.09■□□□□ 0.65
KDM2B-216ENST00000543025 METTL16Q86W50 562 aaKnown RBP19.08■□□□□ 0.65
KDM2B-216ENST00000543025 LINC00116Q8NCU8 138 aa19.08■□□□□ 0.65
KDM2B-216ENST00000543025 CNNM3Q8NE01 707 aa19.08■□□□□ 0.65
KDM2B-216ENST00000543025 TRMT112Q9UI30 125 aaKnown RBP19.08■□□□□ 0.65
KDM2B-216ENST00000543025 SLC12A7Q9Y666 1083 aa19.08■□□□□ 0.65
KDM2B-216ENST00000543025 PDE8AO60658 829 aa19.08■□□□□ 0.64
KDM2B-216ENST00000543025 SSRP1Q08945 709 aaKnown RBP19.08■□□□□ 0.64
KDM2B-216ENST00000543025 CFAP100Q494V2 611 aa19.08■□□□□ 0.64
KDM2B-216ENST00000543025 KRBA2Q6ZNG9 492 aa19.08■□□□□ 0.64
KDM2B-216ENST00000543025 LPIN2Q92539 896 aa19.08■□□□□ 0.64
KDM2B-216ENST00000543025 MYL10Q9BUA6 226 aa19.08■□□□□ 0.64
KDM2B-216ENST00000543025 KCNH3Q9ULD8 1083 aa19.08■□□□□ 0.64
KDM2B-216ENST00000543025 RGPD3A6NKT7 1758 aaPredicted RBP19.08■□□□□ 0.64
KDM2B-216ENST00000543025 RGPD4Q7Z3J3 1758 aa19.08■□□□□ 0.64
KDM2B-216ENST00000543025 PATL2C9JE40 543 aaKnown RBP19.07■□□□□ 0.64
KDM2B-216ENST00000543025 PUM3Q15397 648 aaKnown RBP19.07■□□□□ 0.64
KDM2B-216ENST00000543025 LONRF3Q496Y0 759 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 WASF1Q92558 559 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 SLC26A6Q9BXS9 759 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 NAPBQ9H115 298 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 ZBTB1Q9Y2K1 713 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 ANKRD36CQ5JPF3 1778 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 CRKLP46109 303 aaKnown RBP19.07■□□□□ 0.64
KDM2B-216ENST00000543025 FBXO38Q6PIJ6 1188 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 IFNL3Q8IZI9 196 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 CNNM2Q9H8M5 875 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 ZSWIM5Q9P217 1185 aa19.07■□□□□ 0.64
KDM2B-216ENST00000543025 ZHX1Q9UKY1 873 aaPredicted RBP19.07■□□□□ 0.64
KDM2B-216ENST00000543025 IFIT3O14879 490 aaKnown RBP19.06■□□□□ 0.64
KDM2B-216ENST00000543025 KIF20AO95235 890 aa19.06■□□□□ 0.64
KDM2B-216ENST00000543025 FMNL1O95466 1100 aaPredicted RBP19.06■□□□□ 0.64
KDM2B-216ENST00000543025 NOSTRINQ8IVI9 506 aa19.06■□□□□ 0.64
KDM2B-216ENST00000543025 ELOA2Q8IYF1 753 aaPredicted RBP19.06■□□□□ 0.64
KDM2B-216ENST00000543025 KRI1Q8N9T8 703 aaKnown RBP19.06■□□□□ 0.64
KDM2B-216ENST00000543025 DPF2Q92785 391 aa19.06■□□□□ 0.64
KDM2B-216ENST00000543025 APBA3O96018 575 aa19.06■□□□□ 0.64
KDM2B-216ENST00000543025 CCDC93Q567U6 631 aa19.06■□□□□ 0.64
KDM2B-216ENST00000543025 INTS5Q6P9B9 1019 aaKnown RBP19.06■□□□□ 0.64
KDM2B-216ENST00000543025 MROH5Q6ZUA9 1318 aa19.06■□□□□ 0.64
KDM2B-216ENST00000543025 HOMER1Q86YM7 354 aa19.06■□□□□ 0.64
KDM2B-216ENST00000543025 EPB41L4AQ9HCS5 686 aaPredicted RBP19.06■□□□□ 0.64
KDM2B-216ENST00000543025 HOOK1Q9UJC3 728 aaKnown RBP19.06■□□□□ 0.64
KDM2B-216ENST00000543025 NID2Q14112 1375 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 IFNAR1P17181 557 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 MAP3K12Q12852 859 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 VSTM4Q8IW00 320 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 SPATA5Q8NB90 893 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 TMX1Q9H3N1 280 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 INCENPQ9NQS7 918 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 CCDC87Q9NVE4 849 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 PCDHA5Q9Y5H7 936 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 FGFR2P21802 821 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 SAFBQ15424 915 aaKnown RBP eCLIP19.05■□□□□ 0.64
KDM2B-216ENST00000543025 FOXP4Q8IVH2 680 aaPredicted RBP19.05■□□□□ 0.64
KDM2B-216ENST00000543025 KRT23Q9C075 422 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 LRRC4BQ9NT99 713 aa19.05■□□□□ 0.64
KDM2B-216ENST00000543025 PHLPP2Q6ZVD8 1323 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 MMP1P03956 469 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 TOP1P11387 765 aaKnown RBP19.04■□□□□ 0.64
KDM2B-216ENST00000543025 ETF1P62495 437 aaKnown RBP19.04■□□□□ 0.64
KDM2B-216ENST00000543025 CTDSPL2Q05D32 466 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 GABPB1Q06547 395 aaPredicted RBP19.04■□□□□ 0.64
KDM2B-216ENST00000543025 AKNAD1Q5T1N1 836 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 MAGEB6Q8N7X4 407 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 FANCLQ9NW38 375 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 LRP5O75197 1615 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 TIAM2Q8IVF5 1701 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 ARAP2Q8WZ64 1704 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 UBE2Q2LH0YL09 131 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 MBD4O95243 580 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 KRT222Q8N1A0 295 aa19.04■□□□□ 0.64
KDM2B-216ENST00000543025 PLSCR1O15162 318 aa19.03■□□□□ 0.64
KDM2B-216ENST00000543025 TRIM22Q8IYM9 498 aa19.03■□□□□ 0.64
KDM2B-216ENST00000543025 CNTNAP4Q9C0A0 1308 aa19.03■□□□□ 0.64
KDM2B-216ENST00000543025 CHD4Q14839 1912 aa19.03■□□□□ 0.64
KDM2B-216ENST00000543025 BTBD18B2RXH4 712 aa19.03■□□□□ 0.64
KDM2B-216ENST00000543025 MFSD6Q6ZSS7 791 aa19.03■□□□□ 0.64
KDM2B-216ENST00000543025 FCHSD1Q86WN1 690 aa19.03■□□□□ 0.64
KDM2B-216ENST00000543025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■■■□□ 19
KDM2B-216ENST00000543025 SLC5A1P13866 664 aa19.02■□□□□ 0.64
KDM2B-216ENST00000543025 MDM2Q00987 491 aaPredicted RBP19.02■□□□□ 0.64
KDM2B-216ENST00000543025 SART3Q15020 963 aaKnown RBP19.02■□□□□ 0.64
KDM2B-216ENST00000543025 RILPL1Q5EBL4 403 aa19.02■□□□□ 0.64
KDM2B-216ENST00000543025 SLC27A3Q5K4L6 730 aa19.02■□□□□ 0.64
KDM2B-216ENST00000543025 DIS3L2Q8IYB7 885 aaKnown RBP19.02■□□□□ 0.64
KDM2B-216ENST00000543025 STK11IPQ8N1F8 1099 aa19.02■□□□□ 0.64
KDM2B-216ENST00000543025 HELBQ8NG08 1087 aaPredicted RBP19.02■□□□□ 0.64
KDM2B-216ENST00000543025 ARMT1Q9H993 441 aa19.02■□□□□ 0.64
KDM2B-216ENST00000543025 DOCK2Q92608 1830 aa19.02■□□□□ 0.64
KDM2B-216ENST00000543025 BMP6P22004 513 aa19.02■□□□□ 0.63
KDM2B-216ENST00000543025 IL6STP40189 918 aaPredicted RBP19.02■□□□□ 0.63
KDM2B-216ENST00000543025 RASGRF1Q13972 1273 aa19.02■□□□□ 0.63
KDM2B-216ENST00000543025 TXNRD1Q16881 649 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms