RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 ERO1BQ86YB8 467 aa17.04■□□□□ 0.32
DDX11-221ENST00000542661 CRACR2BQ8N4Y2 399 aaPredicted RBP17.04■□□□□ 0.32
DDX11-221ENST00000542661 ZKSCAN4Q969J2 545 aaPredicted RBP17.04■□□□□ 0.32
DDX11-221ENST00000542661 OSBP2Q969R2 916 aa17.04■□□□□ 0.32
DDX11-221ENST00000542661 STRBPQ96SI9 672 aaKnown RBP17.04■□□□□ 0.32
DDX11-221ENST00000542661 EHD4Q9H223 541 aa17.04■□□□□ 0.32
DDX11-221ENST00000542661 DCP1AQ9NPI6 582 aaPredicted RBP17.04■□□□□ 0.32
DDX11-221ENST00000542661 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
DDX11-221ENST00000542661 SLC4A4Q9Y6R1 1079 aa17.04■□□□□ 0.32
DDX11-221ENST00000542661 POLR3DP05423 398 aaPredicted RBP17.03■□□□□ 0.32
DDX11-221ENST00000542661 INPP5BP32019 993 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 INHBEP58166 350 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 SREBF2Q12772 1141 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 ZMYM1Q5SVZ6 1142 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 AMOTL1Q8IY63 956 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 SDR42E1Q8WUS8 393 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 RILPL2Q969X0 211 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 OPTNQ96CV9 577 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 PICK1Q9NRD5 415 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 WBP1LQ9NX94 342 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 MCM9Q9NXL9 1143 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
DDX11-221ENST00000542661 SNCAIPQ9Y6H5 919 aa17.03■□□□□ 0.32
DDX11-221ENST00000542661 NAV1Q8NEY1 1877 aa17.02■□□□□ 0.32
DDX11-221ENST00000542661 MANSC4A6NHS7 340 aaPredicted RBP17.02■□□□□ 0.32
DDX11-221ENST00000542661 SPDYE5A6NIY4 337 aa17.02■□□□□ 0.32
DDX11-221ENST00000542661 GPAA1O43292 621 aa17.02■□□□□ 0.32
DDX11-221ENST00000542661 CA12O43570 354 aa17.02■□□□□ 0.32
DDX11-221ENST00000542661 GIMAP6Q6P9H5 292 aa17.02■□□□□ 0.32
DDX11-221ENST00000542661 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
DDX11-221ENST00000542661 HIP1O00291 1037 aa17.01■□□□□ 0.31
DDX11-221ENST00000542661 PRKAB2O43741 272 aa17.01■□□□□ 0.31
DDX11-221ENST00000542661 PPATQ06203 517 aa17.01■□□□□ 0.31
DDX11-221ENST00000542661 SCYL3Q8IZE3 742 aa17.01■□□□□ 0.31
DDX11-221ENST00000542661 ZIC5Q96T25 663 aa17.01■□□□□ 0.31
DDX11-221ENST00000542661 HELLSQ9NRZ9 838 aa17.01■□□□□ 0.31
DDX11-221ENST00000542661 M0R2C6 588 aa17■□□□□ 0.31
DDX11-221ENST00000542661 TM4SF4P48230 202 aa17■□□□□ 0.31
DDX11-221ENST00000542661 MKRN3Q13064 507 aaKnown RBP17■□□□□ 0.31
DDX11-221ENST00000542661 PPIL2Q13356 520 aa17■□□□□ 0.31
DDX11-221ENST00000542661 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
DDX11-221ENST00000542661 TTC22Q5TAA0 569 aa17■□□□□ 0.31
DDX11-221ENST00000542661 OTUD5Q96G74 571 aa17■□□□□ 0.31
DDX11-221ENST00000542661 NACAP1Q9BZK3 213 aa17■□□□□ 0.31
DDX11-221ENST00000542661 GINM1Q9NU53 330 aa17■□□□□ 0.31
DDX11-221ENST00000542661 SIPA1L1O43166 1804 aa16.99■□□□□ 0.31
DDX11-221ENST00000542661 FAM196BA6NMK8 535 aa16.99■□□□□ 0.31
DDX11-221ENST00000542661 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
DDX11-221ENST00000542661 PATL2C9JE40 543 aaKnown RBP16.99■□□□□ 0.31
DDX11-221ENST00000542661 HSPA1AP0DMV8 641 aaKnown RBP16.99■□□□□ 0.31
DDX11-221ENST00000542661 HSPA1BP0DMV9 641 aaKnown RBP16.99■□□□□ 0.31
DDX11-221ENST00000542661 CAP2P40123 477 aa16.99■□□□□ 0.31
DDX11-221ENST00000542661 GTF2A2P52657 109 aa16.99■□□□□ 0.31
DDX11-221ENST00000542661 ARPP21Q9UBL0 812 aaPredicted RBP16.99■□□□□ 0.31
DDX11-221ENST00000542661 LAMB1P07942 1786 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 APPP05067 770 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 PTPRAP18433 802 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 SDSP20132 328 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 GJA5P36382 358 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 PLCD1P51178 756 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 MFAP1P55081 439 aaKnown RBP16.98■□□□□ 0.31
DDX11-221ENST00000542661 SNAPC2Q13487 334 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 SLC4A8Q2Y0W8 1093 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 SEC62Q99442 399 aaKnown RBP16.98■□□□□ 0.31
DDX11-221ENST00000542661 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 DNAJC18Q9H819 358 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 SAGE1Q9NXZ1 904 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 PPP4R2Q9NY27 417 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 SWAP70Q9UH65 585 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 DOCK1Q14185 1865 aa16.98■□□□□ 0.31
DDX11-221ENST00000542661 USP17L12C9JPN9 530 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 USP17L21D6R901 530 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 ALDH1A1P00352 501 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 ASNSP08243 561 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 SBK1Q52WX2 424 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 C12orf60Q5U649 245 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 OTUD7BQ6GQQ9 843 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 ZHX2Q9Y6X8 837 aa16.97■□□□□ 0.31
DDX11-221ENST00000542661 BAZ2AQ9UIF9 1905 aaKnown RBP16.97■□□□□ 0.31
DDX11-221ENST00000542661 TESPA1A2RU30 521 aaPredicted RBP16.96■□□□□ 0.31
DDX11-221ENST00000542661 CXCL11O14625 94 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 IRF6O14896 467 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 CETPP11597 493 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
DDX11-221ENST00000542661 TDO2P48775 406 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 CTCFP49711 727 aaPredicted RBP16.96■□□□□ 0.31
DDX11-221ENST00000542661 GABPAQ06546 454 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.31
DDX11-221ENST00000542661 COL13A1Q5TAT6 717 aaPredicted RBP16.96■□□□□ 0.31
DDX11-221ENST00000542661 CTR9Q6PD62 1173 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 MS4A4AQ96JQ5 239 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 FAM227BQ96M60 508 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 KCNH4Q9UQ05 1017 aa16.96■□□□□ 0.31
DDX11-221ENST00000542661 A0A0D9SFI3 127 aa16.95■□□□□ 0.3
DDX11-221ENST00000542661 CYP2D6P10635 497 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms