RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 SLFN5Q08AF3 891 aa23.43■■□□□ 1.34
RAP1B-227ENST00000542018 SPP2Q13103 211 aa23.43■■□□□ 1.34
RAP1B-227ENST00000542018 ALDH1L2Q3SY69 923 aa23.43■■□□□ 1.34
RAP1B-227ENST00000542018 PROCA1Q8NCQ7 364 aaPredicted RBP23.43■■□□□ 1.34
RAP1B-227ENST00000542018 DDX60LQ5H9U9 1706 aaKnown RBP23.42■■□□□ 1.34
RAP1B-227ENST00000542018 NPM3O75607 178 aaKnown RBP23.42■■□□□ 1.34
RAP1B-227ENST00000542018 NECAB2Q7Z6G3 386 aa23.42■■□□□ 1.34
RAP1B-227ENST00000542018 SIPA1L1O43166 1804 aa23.42■■□□□ 1.34
RAP1B-227ENST00000542018 BMP8BP34820 402 aa23.41■■□□□ 1.34
RAP1B-227ENST00000542018 XAGE2Q96GT9 111 aa23.41■■□□□ 1.34
RAP1B-227ENST00000542018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.41■■□□□ 1.34
RAP1B-227ENST00000542018 HMGCRP04035 888 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 HMGCS2P54868 508 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 SLF2Q8IX21 1173 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 C7orf61Q8IZ16 206 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 ANKLE1Q8NAG6 615 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 ZNF280CQ8ND82 737 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 CDCA7LQ96GN5 454 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 OSBPL5Q9H0X9 879 aaPredicted RBP23.4■■□□□ 1.34
RAP1B-227ENST00000542018 SMC4Q9NTJ3 1288 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 PNMA3Q9UL41 463 aa23.4■■□□□ 1.34
RAP1B-227ENST00000542018 ZMYND8Q9ULU4 1186 aaPredicted RBP23.4■■□□□ 1.34
RAP1B-227ENST00000542018 COL2A1P02458 1487 aaPredicted RBP23.39■■□□□ 1.34
RAP1B-227ENST00000542018 A0A1B0GUL7 405 aa23.39■■□□□ 1.33
RAP1B-227ENST00000542018 SPTY2D1Q68D10 685 aaPredicted RBP23.39■■□□□ 1.33
RAP1B-227ENST00000542018 PI16Q6UXB8 463 aa23.39■■□□□ 1.33
RAP1B-227ENST00000542018 MEIS3Q99687 375 aa23.39■■□□□ 1.33
RAP1B-227ENST00000542018 ASCC2Q9H1I8 757 aaPredicted RBP23.39■■□□□ 1.33
RAP1B-227ENST00000542018 PEX10O60683 326 aa23.38■■□□□ 1.33
RAP1B-227ENST00000542018 CAP2P40123 477 aa23.38■■□□□ 1.33
RAP1B-227ENST00000542018 GCLCP48506 637 aaPredicted RBP23.38■■□□□ 1.33
RAP1B-227ENST00000542018 TFCP2Q12800 502 aa23.38■■□□□ 1.33
RAP1B-227ENST00000542018 ERICH6Q7L0X2 663 aa23.38■■□□□ 1.33
RAP1B-227ENST00000542018 TRIB2Q92519 343 aa23.38■■□□□ 1.33
RAP1B-227ENST00000542018 NSUN4Q96CB9 384 aaKnown RBP23.38■■□□□ 1.33
RAP1B-227ENST00000542018 HMG20BQ9P0W2 317 aa23.38■■□□□ 1.33
RAP1B-227ENST00000542018 NOB1Q9ULX3 412 aaKnown RBP23.38■■□□□ 1.33
RAP1B-227ENST00000542018 UNC80Q8N2C7 3258 aa23.37■■□□□ 1.33
RAP1B-227ENST00000542018 RPTORQ8N122 1335 aa23.37■■□□□ 1.33
RAP1B-227ENST00000542018 SH3D19Q5HYK7 790 aa23.37■■□□□ 1.33
RAP1B-227ENST00000542018 TBC1D9Q6ZT07 1266 aa23.37■■□□□ 1.33
RAP1B-227ENST00000542018 LAMA2P24043 3122 aaKnown RBP23.36■■□□□ 1.33
RAP1B-227ENST00000542018 SYN1P17600 705 aa23.36■■□□□ 1.33
RAP1B-227ENST00000542018 JAG1P78504 1218 aa23.36■■□□□ 1.33
RAP1B-227ENST00000542018 MAP3K21Q5TCX8 1036 aa23.36■■□□□ 1.33
RAP1B-227ENST00000542018 TRMT2AQ8IZ69 625 aaKnown RBP23.36■■□□□ 1.33
RAP1B-227ENST00000542018 HMX1Q9NP08 348 aaPredicted RBP23.36■■□□□ 1.33
RAP1B-227ENST00000542018 MORF4L1Q9UBU8 362 aa23.36■■□□□ 1.33
RAP1B-227ENST00000542018 OGDHLQ9ULD0 1010 aa23.36■■□□□ 1.33
RAP1B-227ENST00000542018 Q7L0L9 218 aa23.35■■□□□ 1.33
RAP1B-227ENST00000542018 NBPF3Q9H094 633 aa23.35■■□□□ 1.33
RAP1B-227ENST00000542018 DNAH12Q6ZR08 3092 aa23.35■■□□□ 1.33
RAP1B-227ENST00000542018 PFASO15067 1338 aa23.34■■□□□ 1.33
RAP1B-227ENST00000542018 CDK5RAP2Q96SN8 1893 aa23.34■■□□□ 1.33
RAP1B-227ENST00000542018 USP17L5A8MUK1 530 aa23.34■■□□□ 1.33
RAP1B-227ENST00000542018 MAGEA10P43363 369 aaPredicted RBP23.34■■□□□ 1.33
RAP1B-227ENST00000542018 MVPQ14764 893 aaKnown RBP23.34■■□□□ 1.33
RAP1B-227ENST00000542018 GPR153Q6NV75 609 aa23.34■■□□□ 1.33
RAP1B-227ENST00000542018 TBC1D2Q9BYX2 928 aa23.34■■□□□ 1.33
RAP1B-227ENST00000542018 TXNRD2Q9NNW7 524 aa23.34■■□□□ 1.33
RAP1B-227ENST00000542018 CUL9Q8IWT3 2517 aa23.34■■□□□ 1.33
RAP1B-227ENST00000542018 SHROOM1Q2M3G4 852 aaPredicted RBP23.33■■□□□ 1.33
RAP1B-227ENST00000542018 POTEEQ6S8J3 1075 aa23.33■■□□□ 1.33
RAP1B-227ENST00000542018 SPATA5Q8NB90 893 aa23.33■■□□□ 1.33
RAP1B-227ENST00000542018 C11orf49Q9H6J7 331 aa23.33■■□□□ 1.33
RAP1B-227ENST00000542018 MAP4K4O95819 1239 aaPredicted RBP23.32■■□□□ 1.32
RAP1B-227ENST00000542018 PABPC4Q13310 644 aaKnown RBP eCLIP23.32■■□□□ 1.32
RAP1B-227ENST00000542018 LRIT3Q3SXY7 679 aa23.32■■□□□ 1.32
RAP1B-227ENST00000542018 DEFB123Q8N688 67 aa23.32■■□□□ 1.32
RAP1B-227ENST00000542018 P2RX7Q99572 595 aaKnown RBP23.32■■□□□ 1.32
RAP1B-227ENST00000542018 DNAJC18Q9H819 358 aa23.32■■□□□ 1.32
RAP1B-227ENST00000542018 AKAP2Q9Y2D5 859 aa23.32■■□□□ 1.32
RAP1B-227ENST00000542018 SRGAP3O43295 1099 aa23.31■■□□□ 1.32
RAP1B-227ENST00000542018 CYP2B6P20813 491 aa23.31■■□□□ 1.32
RAP1B-227ENST00000542018 ARID4AP29374 1257 aaPredicted RBP23.31■■□□□ 1.32
RAP1B-227ENST00000542018 MTX1Q13505 466 aa23.31■■□□□ 1.32
RAP1B-227ENST00000542018 MTMR2Q13614 643 aa23.31■■□□□ 1.32
RAP1B-227ENST00000542018 SH3RF3Q8TEJ3 882 aaPredicted RBP23.31■■□□□ 1.32
RAP1B-227ENST00000542018 WDR18Q9BV38 432 aa23.31■■□□□ 1.32
RAP1B-227ENST00000542018 LDHCP07864 332 aa23.3■■□□□ 1.32
RAP1B-227ENST00000542018 PRKAR2AP13861 404 aaKnown RBP23.3■■□□□ 1.32
RAP1B-227ENST00000542018 HOXA7P31268 230 aaPredicted RBP23.3■■□□□ 1.32
RAP1B-227ENST00000542018 MCAMP43121 646 aa23.3■■□□□ 1.32
RAP1B-227ENST00000542018 BACE1P56817 501 aa23.3■■□□□ 1.32
RAP1B-227ENST00000542018 GSTO1P78417 241 aa23.3■■□□□ 1.32
RAP1B-227ENST00000542018 TEX11Q8IYF3 940 aa23.3■■□□□ 1.32
RAP1B-227ENST00000542018 USP6NLQ92738 828 aa23.3■■□□□ 1.32
RAP1B-227ENST00000542018 NEUROD6Q96NK8 337 aa23.3■■□□□ 1.32
RAP1B-227ENST00000542018 API5Q9BZZ5 524 aaKnown RBP23.3■■□□□ 1.32
RAP1B-227ENST00000542018 HERC5Q9UII4 1024 aaKnown RBP23.3■■□□□ 1.32
RAP1B-227ENST00000542018 FOCADQ5VW36 1801 aa23.3■■□□□ 1.32
RAP1B-227ENST00000542018 COL6A1P12109 1028 aa23.29■■□□□ 1.32
RAP1B-227ENST00000542018 TDHQ8IZJ6 230 aa23.29■■□□□ 1.32
RAP1B-227ENST00000542018 MTMR10Q9NXD2 777 aa23.29■■□□□ 1.32
RAP1B-227ENST00000542018 RBPJLQ9UBG7 517 aa23.29■■□□□ 1.32
RAP1B-227ENST00000542018 HDAC5Q9UQL6 1122 aa23.29■■□□□ 1.32
RAP1B-227ENST00000542018 MYO5AQ9Y4I1 1855 aaKnown RBP23.29■■□□□ 1.32
RAP1B-227ENST00000542018 XRCC5P13010 732 aaKnown RBP23.28■■□□□ 1.32
RAP1B-227ENST00000542018 HERVK_113P62684 666 aa23.28■■□□□ 1.32
RAP1B-227ENST00000542018 Q3C1V9 767 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms