RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 SOS2Q07890 1332 aaPredicted RBP17.26■□□□□ 0.35
VARS2-211ENST00000541562 GOLGA8HP0CJ92 632 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
VARS2-211ENST00000541562 PRDX5P30044 214 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 TPM4P67936 248 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 ZNF654Q8IZM8 581 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 VGLL2Q8N8G2 317 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 TTF1Q15361 905 aaPredicted RBP17.25■□□□□ 0.35
VARS2-211ENST00000541562 POLR3EQ9NVU0 708 aa17.25■□□□□ 0.35
VARS2-211ENST00000541562 PPARAQ07869 468 aa17.25■□□□□ 0.35
VARS2-211ENST00000541562 TXNRD3Q86VQ6 643 aa17.25■□□□□ 0.35
VARS2-211ENST00000541562 DYNLL2Q96FJ2 89 aa17.25■□□□□ 0.35
VARS2-211ENST00000541562 MAGEB6P1A0A0J9YX57 407 aa17.25■□□□□ 0.35
VARS2-211ENST00000541562 SART3Q15020 963 aaKnown RBP17.25■□□□□ 0.35
VARS2-211ENST00000541562 ZFP91Q96JP5 570 aaPredicted RBP17.25■□□□□ 0.35
VARS2-211ENST00000541562 CMA1P23946 247 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 NTRK3Q16288 839 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 ZNF771Q7L3S4 317 aaPredicted RBP17.24■□□□□ 0.35
VARS2-211ENST00000541562 NOSTRINQ8IVI9 506 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 SLC44A5Q8NCS7 719 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 CCDC87Q9NVE4 849 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 TCRBV5S4A2TA0A5A2 114 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 NCAPHQ15003 741 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 BRAPQ7Z569 592 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 PPP1R13BQ96KQ4 1090 aa17.24■□□□□ 0.35
VARS2-211ENST00000541562 MYO5AQ9Y4I1 1855 aaKnown RBP17.23■□□□□ 0.35
VARS2-211ENST00000541562 SCN11AQ9UI33 1791 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 CDKL5O76039 1030 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 YEATS4O95619 227 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
VARS2-211ENST00000541562 IFIT1BQ5T764 474 aaKnown RBP17.23■□□□□ 0.35
VARS2-211ENST00000541562 PIK3AP1Q6ZUJ8 805 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 KIF18AQ8NI77 898 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 MRFAP1L1Q96HT8 127 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 SMTNL1A8MU46 457 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 TEX33O43247 280 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 KRI1Q8N9T8 703 aaKnown RBP17.23■□□□□ 0.35
VARS2-211ENST00000541562 MARCH10Q8NA82 808 aaPredicted RBP17.23■□□□□ 0.35
VARS2-211ENST00000541562 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
VARS2-211ENST00000541562 POLR3GO15318 223 aaPredicted RBP17.23■□□□□ 0.35
VARS2-211ENST00000541562 TERF1P54274 439 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 DIXDC1Q155Q3 683 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 C8orf37Q96NL8 207 aa17.23■□□□□ 0.35
VARS2-211ENST00000541562 SEC31AO94979 1220 aaKnown RBP17.22■□□□□ 0.35
VARS2-211ENST00000541562 SLURP2P0DP57 97 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
VARS2-211ENST00000541562 UBE3CQ15386 1083 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 INTS5Q6P9B9 1019 aaKnown RBP17.22■□□□□ 0.35
VARS2-211ENST00000541562 A0A087X0B3 334 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 F8W031 263 aaPredicted RBP17.22■□□□□ 0.35
VARS2-211ENST00000541562 USP17L8P0C7I0 530 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 UQCRFS1P1P0C7P4 283 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 PTPAQ15257 358 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 SKIDA1Q1XH10 827 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 KRBA2Q6ZNG9 492 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 TFR2Q9UP52 801 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 CPDO75976 1380 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 PP2D1A8MPX8 630 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
VARS2-211ENST00000541562 SHISA4Q96DD7 197 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
VARS2-211ENST00000541562 GNG11P61952 73 aa17.21■□□□□ 0.35
VARS2-211ENST00000541562 MYL5Q02045 173 aa17.21■□□□□ 0.35
VARS2-211ENST00000541562 FBXO38Q6PIJ6 1188 aa17.21■□□□□ 0.35
VARS2-211ENST00000541562 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
VARS2-211ENST00000541562 KMT5BQ4FZB7 885 aa17.21■□□□□ 0.35
VARS2-211ENST00000541562 CARD6Q9BX69 1037 aa17.21■□□□□ 0.35
VARS2-211ENST00000541562 TEX35Q5T0J7 233 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 JMYQ8N9B5 988 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 SMARCE1Q969G3 411 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 MAP7D2Q96T17 732 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 VPS16Q9H269 839 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 MAN1B1Q9UKM7 699 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 TSPY2A6NKD2 308 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 POSTNQ15063 836 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 KCTD19Q17RG1 926 aaPredicted RBP17.2■□□□□ 0.34
VARS2-211ENST00000541562 TOGARAM2Q6ZUX3 1019 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
VARS2-211ENST00000541562 MAP3K14Q99558 947 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 MCM9Q9NXL9 1143 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
VARS2-211ENST00000541562 NLRP5P59047 1200 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.19■□□□□ 0.34
VARS2-211ENST00000541562 A0A1W2PQ27 194 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 A0A1W2PQ64 194 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 A0A1W2PQD8 194 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 ARHGAP29Q52LW3 1261 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
VARS2-211ENST00000541562 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 HSD3B7Q9H2F3 369 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 PUF60Q9UHX1 559 aaKnown RBP17.19■□□□□ 0.34
VARS2-211ENST00000541562 LAMA4Q16363 1823 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 MMP1P03956 469 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 ZNF34Q8IZ26 560 aa17.19■□□□□ 0.34
VARS2-211ENST00000541562 MNS1Q8NEH6 495 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms