RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 RIC1Q4ADV7 1423 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 N4BP1O75113 896 aaKnown RBP11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 MBD4O95243 580 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 TIGD1Q96MW7 591 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 TFR2Q9UP52 801 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 CIAO1O76071 339 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 MCM6Q14566 821 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 NOSTRINQ8IVI9 506 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 MAGEB6Q8N7X4 407 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 CABP5Q9NP86 173 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 MRFAP1Q9Y605 127 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 SLC12A7Q9Y666 1083 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 WTIPA6NIX2 430 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 ARHGAP6O43182 974 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 CCT6AP40227 531 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 SMC1AQ14683 1233 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 AIDAQ96BJ3 306 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 HINFPQ9BQA5 517 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 CSRNP2Q9H175 543 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 C1orf167Q5SNV9 1468 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 CAMTA1Q9Y6Y1 1673 aa11.86□□□□□ -0.51
CDC42SE1-207ENST00000540998 EFCAB8A8MWE9 144 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 CBFA2T2O43439 604 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 PPP6R2O75170 966 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 EVX2Q03828 476 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 TBX2Q13207 712 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 SPECC1LQ69YQ0 1117 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 FBXL16Q8N461 479 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 ACRBPQ8NEB7 543 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 CDC5LQ99459 802 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 ARGLU1Q9NWB6 273 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 FBXO2Q9UK22 296 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 MAPK8IP1Q9UQF2 711 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 ECM29Q5VYK3 1845 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 RHOXF2BP0C7M4 288 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 RBL2Q08999 1139 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 DPYDQ12882 1025 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 TTLL11Q8NHH1 800 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 EEF2KMTQ96G04 330 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 PNKPQ96T60 521 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 RHOXF2Q9BQY4 288 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 ISCA1Q9BUE6 129 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 LCMT1Q9UIC8 334 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 RIPOR2Q9Y4F9 1068 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 CCDC66A2RUB6 948 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 CUTAO60888 179 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 PHACTR2O75167 634 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 VPS54Q9P1Q0 977 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 AKAP2Q9Y2D5 859 aa11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 TRPM3Q9HCF6 1732 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-207ENST00000540998 ZSCAN12O43309 604 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 ZNF18P17022 549 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 GPIHBP1Q8IV16 184 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 STRBPQ96SI9 672 aaKnown RBP11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 RAI14Q9P0K7 980 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 AKAP11Q9UKA4 1901 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 CYP2D7A0A087X1C5 515 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 ADAMTS3O15072 1205 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 TRHP20396 242 aaPredicted RBP11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 KCNJ6P48051 423 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 SKIDA1Q1XH10 827 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 SLC4A8Q2Y0W8 1093 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 FUT8Q9BYC5 575 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 NAPBQ9H115 298 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 TRIM10Q9UDY6 481 aa11.84□□□□□ -0.51
CDC42SE1-207ENST00000540998 ANKRD65E5RJM6 399 aa11.83□□□□□ -0.51
CDC42SE1-207ENST00000540998 LMAN1P49257 510 aa11.83□□□□□ -0.51
CDC42SE1-207ENST00000540998 IFNL3Q8IZI9 196 aa11.83□□□□□ -0.51
CDC42SE1-207ENST00000540998 LCORLQ8N3X6 602 aa11.83□□□□□ -0.51
CDC42SE1-207ENST00000540998 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.83□□□□□ -0.51
CDC42SE1-207ENST00000540998 TBC1D2BQ9UPU7 963 aa11.83□□□□□ -0.51
CDC42SE1-207ENST00000540998 A0A0G2JS52 829 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 TRIM66O15016 1216 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 MMP1P03956 469 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 ZNF569Q5MCW4 686 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 CPLX2Q6PUV4 134 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 RSRC2Q7L4I2 434 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 SDR42E1Q8WUS8 393 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 PLEKHA4Q9H4M7 779 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 ACTN4O43707 911 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 CASP14P31944 242 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 FXR1P51114 621 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 LONRF2Q1L5Z9 754 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 FOXR1Q6PIV2 292 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 IGSF22Q8N9C0 903 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 GDAP1L1Q96MZ0 367 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
CDC42SE1-207ENST00000540998 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
CDC42SE1-207ENST00000540998 TCRBV5S4A2TA0A5A2 114 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms