RNA–Protein interactions for RNA: ENST00000540977.1

RFXANK-208, Transcript of regulatory factor X associated ankyrin containing protein, human

TSL 2

Gene RFXANK, Length 389 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFXANK-208	ENST00000540977	DENND2A	Q9ULE3	1009 aa		13.45	□□□□□ -0.26
RFXANK-208	ENST00000540977	ARID4A	P29374	1257 aa	Predicted RBP	13.44	□□□□□ -0.26
RFXANK-208	ENST00000540977	PHKA1	P46020	1223 aa		13.44	□□□□□ -0.26
RFXANK-208	ENST00000540977	MAP3K12	Q12852	859 aa		13.44	□□□□□ -0.26
RFXANK-208	ENST00000540977	FAM43A	Q8N2R8	423 aa		13.44	□□□□□ -0.26
RFXANK-208	ENST00000540977	SPATA5	Q8NB90	893 aa		13.44	□□□□□ -0.26
RFXANK-208	ENST00000540977	TBC1D32	Q96NH3	1257 aa		13.44	□□□□□ -0.26
RFXANK-208	ENST00000540977	WRNIP1	Q96S55	665 aa		13.44	□□□□□ -0.26
RFXANK-208	ENST00000540977	PTCH2	Q9Y6C5	1203 aa		13.44	□□□□□ -0.26
RFXANK-208	ENST00000540977	SEMA3E	O15041	775 aa		13.43	□□□□□ -0.26
RFXANK-208	ENST00000540977	EPB41L2	O43491	1005 aa	Known RBP	13.43	□□□□□ -0.26
RFXANK-208	ENST00000540977	IDH1	O75874	414 aa	Known RBP	13.43	□□□□□ -0.26
RFXANK-208	ENST00000540977	ZAP70	P43403	619 aa		13.43	□□□□□ -0.26
RFXANK-208	ENST00000540977	NMI	Q13287	307 aa	Predicted RBP	13.43	□□□□□ -0.26
RFXANK-208	ENST00000540977	WDR66	Q8TBY9	1149 aa		13.43	□□□□□ -0.26
RFXANK-208	ENST00000540977	ZNF341	Q9BYN7	854 aa		13.43	□□□□□ -0.26
RFXANK-208	ENST00000540977	SNCAIP	Q9Y6H5	919 aa		13.43	□□□□□ -0.26
RFXANK-208	ENST00000540977	RNF113A	O15541	343 aa	Known RBP	13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	BCAM	P50895	628 aa		13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	MCMDC2	Q4G0Z9	681 aa		13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	RNF20	Q5VTR2	975 aa		13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	ERICH6	Q7L0X2	663 aa		13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	ANKRD23	Q86SG2	305 aa		13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	ZGPAT	Q8N5A5	531 aa	Known RBP	13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	HELLS	Q9NRZ9	838 aa		13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	LRP2BP	Q9P2M1	347 aa		13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	NDUFB9	Q9Y6M9	179 aa		13.42	□□□□□ -0.26
RFXANK-208	ENST00000540977	BTBD19	C9JJ37	291 aa		13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	IRF6	O14896	467 aa		13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	SGSM2	O43147	1006 aa		13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	MCAM	P43121	646 aa		13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	CHAF1A	Q13111	956 aa	Predicted RBP	13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	FAM151A	Q8WW52	585 aa		13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	CNKSR2	Q8WXI2	1034 aa		13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	EDC3	Q96F86	508 aa	Known RBP	13.41	□□□□□ -0.26
RFXANK-208	ENST00000540977	ZBTB22	O15209	634 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	ZKSCAN1	P17029	563 aa	Predicted RBP	13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	RBM25	P49756	843 aa	Known RBP	13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	FXR1	P51114	621 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	C17orf99	Q6UX52	265 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	HSCB	Q8IWL3	235 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	CDAN1	Q8IWY9	1227 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	USP26	Q9BXU7	913 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	RAI14	Q9P0K7	980 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	HMG20B	Q9P0W2	317 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	ABCF2	Q9UG63	623 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	ZNF112	Q9UJU3	913 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	KCNH4	Q9UQ05	1017 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	BRCA2	P51587	3418 aa		13.4	□□□□□ -0.26
RFXANK-208	ENST00000540977	CAP1	Q01518	475 aa		13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	RASGRF1	Q13972	1273 aa		13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	NOL9	Q5SY16	702 aa	Known RBP	13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	APPBP2	Q92624	585 aa		13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	IPO9	Q96P70	1041 aa	Known RBP	13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	PARK7	Q99497	189 aa	Known RBP	13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	NOL10	Q9BSC4	688 aa	Known RBP	13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	SRRD	Q9UH36	339 aa		13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	CCDC171	Q6TFL3	1326 aa		13.39	□□□□□ -0.27
RFXANK-208	ENST00000540977	CXCL11	O14625	94 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	ST18	O60284	1047 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	UBXN2A	P68543	259 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	RABEP1	Q15276	862 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	SLC9C2	Q5TAH2	1124 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	RAET1E	Q8TD07	263 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	TRIM47	Q96LD4	638 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	FAM227B	Q96M60	508 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	HTATIP2	Q9BUP3	242 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	ANTXR1	Q9H6X2	564 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977	DOCK2	Q92608	1830 aa		13.38	□□□□□ -0.27
RFXANK-208	ENST00000540977		A0A0D9SFI3	127 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	PDHX	O00330	501 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	CYP2E1	P05181	493 aa	Predicted RBP	13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	GRK4	P32298	578 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	PSMC4	P43686	418 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	CACNB3	P54284	484 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	GRIK5	Q16478	980 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	PI16	Q6UXB8	463 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	FASTKD5	Q7L8L6	764 aa	Known RBP	13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	DZIP1	Q86YF9	867 aa	Known RBP	13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	SLC45A1	Q9Y2W3	748 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977		U3KPZ7	1027 aa	Predicted RBP	13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	SALL1	Q9NSC2	1324 aa		13.37	□□□□□ -0.27
RFXANK-208	ENST00000540977	CEP290	O15078	2479 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	IGSF3	O75054	1194 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	FMNL1	O95466	1100 aa	Predicted RBP	13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	HSP90AA1	P07900	732 aa	Known RBP	13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	GJB1	P08034	283 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	GJA8	P48165	433 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	FCGRT	P55899	365 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	ANAPC15	P60006	121 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	UBE3C	Q15386	1083 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	ZMYM1	Q5SVZ6	1142 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	MAGEB6	Q8N7X4	407 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	SLAIN1	Q8ND83	568 aa		13.36	□□□□□ -0.27
RFXANK-208	ENST00000540977	IL27	Q8NEV9	243 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms