RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
C2CD3-215ENST00000540452 PLIN4Q96Q06 1357 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 WTIPA6NIX2 430 aaPredicted RBP9.68□□□□□ -0.86
C2CD3-215ENST00000540452 GOLGA8AA7E2F4 631 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 JAK2O60674 1132 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 MMP14P50281 582 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 CCT2P78371 535 aaKnown RBP9.68□□□□□ -0.86
C2CD3-215ENST00000540452 CTDSPL2Q05D32 466 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 NTRK3Q16288 839 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 MFSD14BQ5SR56 506 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 SOGA3Q5TF21 947 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 C12orf60Q5U649 245 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 HHIPL2Q6UWX4 724 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 NFXL1Q6ZNB6 911 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 USP48Q86UV5 1035 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 DGKHQ86XP1 1220 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 TRIM22Q8IYM9 498 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 CCDC24Q8N4L8 307 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 SDR42E1Q8WUS8 393 aa9.68□□□□□ -0.86
C2CD3-215ENST00000540452 ZSCAN10Q96SZ4 725 aaPredicted RBP9.68□□□□□ -0.86
C2CD3-215ENST00000540452 RNF26Q9BY78 433 aaPredicted RBP9.68□□□□□ -0.86
C2CD3-215ENST00000540452 ORC3Q9UBD5 711 aaPredicted RBP9.68□□□□□ -0.86
C2CD3-215ENST00000540452 COL2A1P02458 1487 aaPredicted RBP9.67□□□□□ -0.86
C2CD3-215ENST00000540452 TNKSO95271 1327 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 USP17L12C9JPN9 530 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 USP17L21D6R901 530 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 FMNL1O95466 1100 aaPredicted RBP9.67□□□□□ -0.86
C2CD3-215ENST00000540452 YEATS4O95619 227 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 FDPSP14324 419 aaKnown RBP9.67□□□□□ -0.86
C2CD3-215ENST00000540452 XBP1P17861 261 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 ZSCAN23Q3MJ62 389 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 CCDC183Q5T5S1 534 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 STRIP1Q5VSL9 837 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 CATIPQ7Z7H3 387 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 ZNF654Q8IZM8 581 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 C8orf76Q96K31 380 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 AATFQ9NY61 560 aaKnown RBP eCLIP9.67□□□□□ -0.86
C2CD3-215ENST00000540452 SLX4Q8IY92 1834 aa9.67□□□□□ -0.86
C2CD3-215ENST00000540452 DEXIO95424 95 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 U2AF2P26368 475 aaKnown RBP eCLIP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 KIF5BP33176 963 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 IARSP41252 1262 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 USP5P45974 858 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 DYNLL1P63167 89 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 DNM1Q05193 864 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 SSRP1Q08945 709 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 TRIM29Q14134 588 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 EZH2Q15910 746 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 RTN1Q16799 776 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 IFIT1BQ5T764 474 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 CAVIN1Q6NZI2 390 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 LRSAM1Q6UWE0 723 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 CHST3Q7LGC8 479 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 C2CD5Q86YS7 1000 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 ENAHQ8N8S7 591 aaPredicted RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 FANCBQ8NB91 859 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 KCNG4Q8TDN1 519 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 C7orf43Q8WVR3 580 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 SPATA32Q96LK8 384 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 NCOA5Q9HCD5 579 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 DDX19AQ9NUU7 478 aaKnown RBP9.66□□□□□ -0.86
C2CD3-215ENST00000540452 RCOR1Q9UKL0 485 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 CNPY2Q9Y2B0 182 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 MYH8P13535 1937 aa9.66□□□□□ -0.86
C2CD3-215ENST00000540452 GOLGA6L4A6NEF3 574 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 MINDY4BA8MYZ0 360 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 CAVIN2O95810 425 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 SMARCA1P28370 1054 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 BTDP43251 543 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 NOVP48745 357 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 GNAQP50148 359 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 EN1Q05925 392 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-215ENST00000540452 C16orf86Q6ZW13 317 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 MICU3Q86XE3 530 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 RTKN2Q8IZC4 609 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 LEO1Q8WVC0 666 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-215ENST00000540452 PSMD1Q99460 953 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 GRPEL1Q9HAV7 217 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 ANO8Q9HCE9 1232 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-215ENST00000540452 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 FAM217BQ9NTX9 383 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-215ENST00000540452 MCM9Q9NXL9 1143 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 RTEL1Q9NZ71 1219 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 SWAP70Q9UH65 585 aa9.65□□□□□ -0.86
C2CD3-215ENST00000540452 NAP1L2Q9ULW6 460 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-215ENST00000540452 A0A1W2PQ27 194 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 A0A1W2PQ64 194 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 A0A1W2PQD8 194 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 CTAGE5O15320 804 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 FIBPO43427 364 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 CDC27P30260 824 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 ADD1P35611 737 aaKnown RBP9.64□□□□□ -0.87
C2CD3-215ENST00000540452 NASPP49321 788 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-215ENST00000540452 RHBDL3P58872 404 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 KIF23Q02241 960 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-215ENST00000540452 KIAA2012Q0VF49 1180 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 TROAPQ12815 778 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms