RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 DNM3Q9UQ16 869 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 ERVV-2B6SEH9 535 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 EBAG9O00559 213 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 ACTN4O43707 911 aaKnown RBP7.24□□□□□ -1.25
LSAMP-207ENST00000539563 ZBED4O75132 1171 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 KCNA6P17658 529 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 KRT24Q2M2I5 525 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 SYT10Q6XYQ8 523 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 NAPGQ99747 312 aaPredicted RBP7.24□□□□□ -1.25
LSAMP-207ENST00000539563 DSCC1Q9BVC3 393 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 STK32BQ9NY57 414 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 ERCC5P28715 1186 aaPredicted RBP7.24□□□□□ -1.25
LSAMP-207ENST00000539563 EIF6P56537 245 aaKnown RBP7.24□□□□□ -1.25
LSAMP-207ENST00000539563 DAAM2Q86T65 1068 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 IGSF22Q8N9C0 903 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC169A6NNP5 214 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 STK10O94804 968 aaKnown RBP7.24□□□□□ -1.25
LSAMP-207ENST00000539563 PPP2R3AQ06190 1150 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 SLC9C1Q4G0N8 1177 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 SGSM2O43147 1006 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 TRPC3Q13507 836 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 FCHSD1Q86WN1 690 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 UBLCP1Q8WVY7 318 aaPredicted RBP7.24□□□□□ -1.25
LSAMP-207ENST00000539563 PLIN2Q99541 437 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 KIAA0232Q92628 1395 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 BCRP11274 1271 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 MNAT1P51948 309 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 GCKRQ14397 625 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC25Q86WR0 208 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 PPP1R9BQ96SB3 815 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 KDM3AQ9Y4C1 1321 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 PIK3AP1Q6ZUJ8 805 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 G2E3Q7L622 706 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 CAPN2P17655 700 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 CSGALNACT2Q8N6G5 542 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 FAM76AQ8TAV0 307 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 VPS16Q9H269 839 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 ZFYVE16Q7Z3T8 1539 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 ZNF202O95125 648 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 DPP8Q6V1X1 898 aaPredicted RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 SYCE1Q8N0S2 351 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 KCNK9Q9NPC2 374 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 AATFQ9NY61 560 aaKnown RBP eCLIP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 SAMD15Q9P1V8 674 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 VPS18Q9P253 973 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 TSKSQ9UJT2 592 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 SPOPO43791 374 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 SETDB1Q15047 1291 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 CFAP157Q5JU67 520 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 ERO1AQ96HE7 468 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 CLSTN2Q9H4D0 955 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 TNNQ9UQP3 1299 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 E7EVH7 732 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 NOP56O00567 594 aaKnown RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 ARID4AP29374 1257 aaPredicted RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 ADCY7P51828 1080 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 BIRC3Q13489 604 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 B4GALNT4Q76KP1 1039 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 IFT20Q8IY31 132 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 SPATA5Q8NB90 893 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC110Q8TBZ0 833 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 TM6SF1Q9BZW5 370 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC87Q9NVE4 849 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 DNAJC5BQ9UF47 199 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 GJA3Q9Y6H8 435 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 BLMP54132 1417 aaPredicted RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 PER1O15534 1290 aaPredicted RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 POSTNQ15063 836 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 INF2Q27J81 1249 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 NOX5Q96PH1 765 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC94Q9BW85 323 aaPredicted RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 GPHNQ9NQX3 736 aaPredicted RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 SSH2Q76I76 1423 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 OTUD6AQ7L8S5 288 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 MAIP1Q8WWC4 291 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 KIFC2Q96AC6 838 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 TRIM35Q9UPQ4 493 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 V9GY48 417 aaPredicted RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 AKNAD1Q5T1N1 836 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 SEC62Q99442 399 aaKnown RBP7.23□□□□□ -1.25
LSAMP-207ENST00000539563 FAM204AQ9H8W3 233 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 NKIRAS1Q9NYS0 192 aa7.23□□□□□ -1.25
LSAMP-207ENST00000539563 GMNNO75496 209 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 PSMC4P43686 418 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 TMTC1Q8IUR5 882 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 DBNDD2Q9BQY9 259 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 ARPP21Q9UBL0 812 aaPredicted RBP7.22□□□□□ -1.25
LSAMP-207ENST00000539563 RHOXF2BP0C7M4 288 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 TXKP42681 527 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 NONOQ15233 471 aaKnown RBP eCLIP7.22□□□□□ -1.25
LSAMP-207ENST00000539563 LEO1Q8WVC0 666 aaPredicted RBP7.22□□□□□ -1.25
LSAMP-207ENST00000539563 CCT6BQ92526 530 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 IWS1Q96ST2 819 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 RHOXF2Q9BQY4 288 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 RSPH14Q9UHP6 348 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 ATP5JP18859 108 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 DNM2P50570 870 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 HACE1Q8IYU2 909 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 SUCLG2Q96I99 432 aa7.22□□□□□ -1.25
LSAMP-207ENST00000539563 TRIM6Q9C030 488 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms