RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TRIM55Q9BYV6 548 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 DISC1Q9NRI5 854 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 RAD18Q9NS91 495 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 SNTG2Q9NY99 539 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 ACTR10Q9NZ32 417 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 TJP2Q9UDY2 1190 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 AP4E1Q9UPM8 1137 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 SNCAIPQ9Y6H5 919 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 CNTNAP5Q8WYK1 1306 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 SLC22A31A6NKX4 558 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 MEIS3P2A8K0S8 358 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 ADH5P11766 374 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 HCLS1P14317 486 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-210ENST00000539303 TTLL4Q14679 1199 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 NKG7Q16617 165 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 EXOSC6Q5RKV6 272 aaKnown RBP4.74□□□□□ -1.65
SNHG1-210ENST00000539303 ZBTB37Q5TC79 503 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.74□□□□□ -1.65
SNHG1-210ENST00000539303 TTC6Q86TZ1 520 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 TMEM40Q8WWA1 233 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 ATG4CQ96DT6 458 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 FANCD2OSQ96PS1 177 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 SRPK1Q96SB4 655 aaKnown RBP4.74□□□□□ -1.65
SNHG1-210ENST00000539303 KANSL2Q9H9L4 492 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 CRIM1Q9NZV1 1036 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 PCDHB10Q9UN67 800 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 TBX22Q9Y458 520 aa4.74□□□□□ -1.65
SNHG1-210ENST00000539303 LTBP3Q9NS15 1303 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 A0A1W2PQH9 124 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 GNB5O14775 395 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 GJB6O95452 261 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 SLFN14P0C7P3 912 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 IMPDH2P12268 514 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 ETF1P62495 437 aaKnown RBP4.73□□□□□ -1.65
SNHG1-210ENST00000539303 RAC1P63000 192 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 DDR2Q16832 855 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 TNNI3KQ59H18 835 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 ARSHQ5FYA8 562 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 SOGA3Q5TF21 947 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 NBPF6Q5VWK0 638 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 MRM1Q6IN84 353 aaKnown RBP4.73□□□□□ -1.65
SNHG1-210ENST00000539303 ZNF746Q6NUN9 644 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-210ENST00000539303 NOP9Q86U38 636 aaKnown RBP4.73□□□□□ -1.65
SNHG1-210ENST00000539303 NBPF4Q96M43 638 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 SLC9A7Q96T83 725 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 WNT10AQ9GZT5 417 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 PICK1Q9NRD5 415 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 ENAMQ9NRM1 1142 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 SIRPGQ9P1W8 387 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 MAPK8IP1Q9UQF2 711 aa4.73□□□□□ -1.65
SNHG1-210ENST00000539303 R3HCC1Q9Y3T6 440 aaKnown RBP4.73□□□□□ -1.65
SNHG1-210ENST00000539303 MRPL42Q9Y6G3 142 aaKnown RBP4.73□□□□□ -1.65
SNHG1-210ENST00000539303 NME1P15531 152 aaKnown RBP4.72□□□□□ -1.65
SNHG1-210ENST00000539303 GUCY2CP25092 1073 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 COL8A1P27658 744 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 PREPP48147 710 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 ERVK-24P63145 666 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 TRIM28Q13263 835 aaKnown RBP4.72□□□□□ -1.65
SNHG1-210ENST00000539303 TMEM201Q5SNT2 666 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 NUTM2GQ5VZR2 741 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 DIEXFQ68CQ4 756 aaKnown RBP4.72□□□□□ -1.65
SNHG1-210ENST00000539303 C6orf15Q6UXA7 325 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-210ENST00000539303 UNC5AQ6ZN44 842 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 ZNF662Q6ZS27 426 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 NLRC3Q7RTR2 1065 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 DYMQ7RTS9 669 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 ZSCAN1Q8NBB4 408 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 C2CD4AQ8NCU7 369 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-210ENST00000539303 OR6P1Q8NGX9 317 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 DEPDC7Q96QD5 511 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 RNF208Q9H0X6 261 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 FAM105AQ9NUU6 356 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 GMIPQ9P107 970 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 MKL2Q9ULH7 1088 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 MSRB2Q9Y3D2 182 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 ACTL7BQ9Y614 415 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 CADPSQ9ULU8 1353 aa4.72□□□□□ -1.65
SNHG1-210ENST00000539303 TLDC2A0PJX2 215 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 MEGF11A6BM72 1044 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 F8W735 103 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-210ENST00000539303 U2SURPO15042 1029 aaKnown RBP4.71□□□□□ -1.66
SNHG1-210ENST00000539303 EIF4EBP3O60516 100 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-210ENST00000539303 TIAF1O95411 115 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 ELNP15502 786 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 CASP7P55210 303 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 SOX4Q06945 474 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-210ENST00000539303 PDE4BQ07343 736 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 SLBPQ14493 270 aaKnown RBP eCLIP4.71□□□□□ -1.662e-8■□□□□ 9.6
SNHG1-210ENST00000539303 IGF2-ASQ6U949 168 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 C12orf50Q8NA57 414 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-210ENST00000539303 SMG8Q8ND04 991 aaKnown RBP4.71□□□□□ -1.66
SNHG1-210ENST00000539303 RNF214Q8ND24 703 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 FAM13CQ8NE31 585 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 XAGE3Q8WTP9 111 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 ISL2Q96A47 359 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 MRFAP1L1Q96HT8 127 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 TMEM87BQ96K49 555 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 TM9SF2Q99805 663 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 MRPL18Q9H0U6 180 aaKnown RBP4.71□□□□□ -1.66
SNHG1-210ENST00000539303 CNNM2Q9H8M5 875 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms