RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KIR3DL1P43629 444 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 ERVK-24P63145 666 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 CLCQ05315 142 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 SQSTM1Q13501 440 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 CBX2Q14781 532 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 PCNX4Q63HM2 1172 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 IQCEQ6IPM2 695 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 CYFIP1Q7L576 1253 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 CKAP2LQ8IYA6 745 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 ANKRD13AQ8IZ07 590 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 NLGN2Q8NFZ4 835 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 ASAP3Q8TDY4 903 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 RSAD2Q8WXG1 361 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 GPRASP2Q96D09 838 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 PAWRQ96IZ0 340 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 RNPC3Q96LT9 517 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 LACRTQ9GZZ8 138 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 CCSER2Q9H7U1 834 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 MAGEC2Q9UBF1 373 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 CDK11AQ9UQ88 783 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 TMA7Q9Y2S6 64 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 HRKO00198 91 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 EFCAB14O75071 495 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 ALAS2P22557 587 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 ITGA6P23229 1130 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 CAMK2GQ13555 558 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 DALRD3Q5D0E6 543 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 FAM196AQ6ZSG2 479 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 GALNT11Q8NCW6 608 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 GATAD2BQ8WXI9 593 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 SPON2Q9BUD6 331 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 ASPNQ9BXN1 380 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 NUCKS1Q9H1E3 243 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 LIN7BQ9HAP6 207 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 SNTG2Q9NY99 539 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 KCNK4Q9NYG8 393 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 LEMD3Q9Y2U8 911 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 GADD45BO75293 160 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 SCG5P05408 212 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 GRIA2P42262 883 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 LIG3P49916 1009 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 FOXB2Q5VYV0 432 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 NECAB2Q7Z6G3 386 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 THAP5Q7Z6K1 395 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 SYT9Q86SS6 491 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 TRIM42Q8IWZ5 723 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 THAP3Q8WTV1 239 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 EZH1Q92800 747 aaPredicted RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 RCC1LQ96I51 464 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 FAM86C1Q9NVL1 165 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 ZNRF3Q9ULT6 936 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 TTF2Q9UNY4 1162 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 CNTNAP4Q9C0A0 1308 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 LTBP3Q9NS15 1303 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 ELOA3CA0A087WX78 387 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 ELOA3DA6NLF2 546 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 AXIN1O15169 862 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 MAN1A2O60476 641 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 WISP1O95388 367 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 ALBP02768 609 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 CYP11A1P05108 521 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 CPB1P15086 417 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 GBP2P32456 591 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 NKG7Q16617 165 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 C21orf62-AS1Q17RA5 79 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 ELOA3BQ3SY89 546 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 SEZ6Q53EL9 994 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 MRPL41Q8IXM3 137 aaKnown RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 ELOA3Q8NG57 546 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 PIWIL2Q8TC59 973 aaKnown RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 NUDT8Q8WV74 236 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 ANAPC16Q96DE5 110 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 DPH2Q9BQC3 489 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 CARD10Q9BWT7 1032 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 EHD4Q9H223 541 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 PHAXQ9H814 394 aaKnown RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 TMEM260Q9NX78 707 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 LMCD1Q9NZU5 365 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 WASF3Q9UPY6 502 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 PAXBP1Q9Y5B6 917 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 TRBV23OR9-2A0A075B6M9 112 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 PHF20L1A8MW92 1017 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 B4E1Z4 1266 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 PPP1R12AO14974 1030 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 FANCGO15287 622 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 EVA1CP58658 441 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 TTBK2Q6IQ55 1244 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 STK11IPQ8N1F8 1099 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 MFSD2AQ8NA29 543 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 MRFAP1L1Q96HT8 127 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 OSBPL2Q9H1P3 480 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 CNNM2Q9H8M5 875 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 TCF7L1Q9HCS4 588 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 BRMS1Q9HCU9 246 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 DIS3Q9Y2L1 958 aaKnown RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 A0A096LPE4 126 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 LOC102724428A0A0B4J2F2 783 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 A0A1W2PPZ6 126 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms