RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
CD9-208ENST00000538834 CTNND1O60716 968 aaKnown RBP16.6■□□□□ 0.25
CD9-208ENST00000538834 LBX1P52954 281 aa16.6■□□□□ 0.25
CD9-208ENST00000538834 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
CD9-208ENST00000538834 MOGSQ13724 837 aa16.6■□□□□ 0.25
CD9-208ENST00000538834 COL13A1Q5TAT6 717 aaPredicted RBP16.6■□□□□ 0.25
CD9-208ENST00000538834 TICAM2Q86XR7 235 aa16.6■□□□□ 0.25
CD9-208ENST00000538834 IFNL1Q8IU54 200 aa16.6■□□□□ 0.25
CD9-208ENST00000538834 MAPKAPK5Q8IW41 473 aa16.6■□□□□ 0.25
CD9-208ENST00000538834 AIDAQ96BJ3 306 aa16.6■□□□□ 0.25
CD9-208ENST00000538834 GREB1LQ9C091 1923 aaPredicted RBP16.6■□□□□ 0.25
CD9-208ENST00000538834 IRF6O14896 467 aa16.59■□□□□ 0.25
CD9-208ENST00000538834 ERC2O15083 957 aa16.59■□□□□ 0.25
CD9-208ENST00000538834 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
CD9-208ENST00000538834 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
CD9-208ENST00000538834 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
CD9-208ENST00000538834 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.59■□□□□ 0.25
CD9-208ENST00000538834 EHD4Q9H223 541 aa16.59■□□□□ 0.25
CD9-208ENST00000538834 PALD1Q9ULE6 856 aa16.59■□□□□ 0.25
CD9-208ENST00000538834 GABPAQ06546 454 aa16.58■□□□□ 0.24
CD9-208ENST00000538834 MKRN3Q13064 507 aaKnown RBP16.58■□□□□ 0.24
CD9-208ENST00000538834 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.24
CD9-208ENST00000538834 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.24
CD9-208ENST00000538834 BRI3BPQ8WY22 251 aa16.58■□□□□ 0.24
CD9-208ENST00000538834 BEGAINQ9BUH8 593 aa16.58■□□□□ 0.24
CD9-208ENST00000538834 PUS7LQ9H0K6 701 aaKnown RBP16.58■□□□□ 0.24
CD9-208ENST00000538834 DCP1AQ9NPI6 582 aaPredicted RBP16.58■□□□□ 0.24
CD9-208ENST00000538834 FAM196BA6NMK8 535 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 TRPA1O75762 1119 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 PTPRAP18433 802 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 CAP2P40123 477 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 GTF2A2P52657 109 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 JAG1P78504 1218 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 ZSCAN25Q6NSZ9 544 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 PLEKHM2Q8IWE5 1019 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 OSBP2Q969R2 916 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 OTUD5Q96G74 571 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.57■□□□□ 0.24
CD9-208ENST00000538834 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
CD9-208ENST00000538834 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 AFG3L2Q9Y4W6 797 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 DOCK3Q8IZD9 2030 aa16.57■□□□□ 0.24
CD9-208ENST00000538834 MGAMO43451 1857 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 CXCL11O14625 94 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 RNF113AO15541 343 aaKnown RBP16.56■□□□□ 0.24
CD9-208ENST00000538834 ALDH1A1P00352 501 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 ZFYP08048 801 aaPredicted RBP16.56■□□□□ 0.24
CD9-208ENST00000538834 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
CD9-208ENST00000538834 APPBP2Q92624 585 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
CD9-208ENST00000538834 CRNKL1Q9BZJ0 848 aaKnown RBP16.56■□□□□ 0.24
CD9-208ENST00000538834 LNPKQ9C0E8 428 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 BCL11AQ9H165 835 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 R3HDMLQ9H3Y0 253 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 ARMT1Q9H993 441 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 ATP8A2Q9NTI2 1148 aa16.56■□□□□ 0.24
CD9-208ENST00000538834 PRKAB2O43741 272 aa16.55■□□□□ 0.24
CD9-208ENST00000538834 MBD4O95243 580 aa16.55■□□□□ 0.24
CD9-208ENST00000538834 PLCD1P51178 756 aa16.55■□□□□ 0.24
CD9-208ENST00000538834 GINM1Q9NU53 330 aa16.55■□□□□ 0.24
CD9-208ENST00000538834 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
CD9-208ENST00000538834 USP5P45974 858 aa16.54■□□□□ 0.24
CD9-208ENST00000538834 SNAPC2Q13487 334 aa16.54■□□□□ 0.24
CD9-208ENST00000538834 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
CD9-208ENST00000538834 SDR42E1Q8WUS8 393 aa16.54■□□□□ 0.24
CD9-208ENST00000538834 SAP30BPQ9UHR5 308 aaKnown RBP16.54■□□□□ 0.24
CD9-208ENST00000538834 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
CD9-208ENST00000538834 RLFQ13129 1914 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 CCL15-CCL14A0A0B4J2E2 113 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 A0A0G2JLL6 359 aaPredicted RBP16.53■□□□□ 0.24
CD9-208ENST00000538834 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 CETPP11597 493 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 EVX2Q03828 476 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 CCL15Q16663 113 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 GPAT2Q6NUI2 795 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 GIMAP6Q6P9H5 292 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 PRRT2Q7Z6L0 340 aaPredicted RBP16.53■□□□□ 0.24
CD9-208ENST00000538834 TTC6Q86TZ1 520 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 FAM43AQ8N2R8 423 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 EVI5LQ96CN4 794 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 TBC1D2Q9BYX2 928 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
CD9-208ENST00000538834 BTBD19C9JJ37 291 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 FOXP2O15409 715 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 TBC1D8O95759 1140 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 PDE4AP27815 886 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 SHMT1P34896 483 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 B4GALNT3Q6L9W6 998 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 WDR18Q9BV38 432 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.52■□□□□ 0.24
CD9-208ENST00000538834 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.24
CD9-208ENST00000538834 HTTP42858 3142 aa16.52■□□□□ 0.23
CD9-208ENST00000538834 ADGRA2Q96PE1 1338 aa16.51■□□□□ 0.23
CD9-208ENST00000538834 M0R2C6 588 aa16.51■□□□□ 0.23
CD9-208ENST00000538834 GPR25O00155 361 aa16.51■□□□□ 0.23
CD9-208ENST00000538834 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
CD9-208ENST00000538834 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
CD9-208ENST00000538834 SBK1Q52WX2 424 aa16.51■□□□□ 0.23
CD9-208ENST00000538834 SH3D19Q5HYK7 790 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms