RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 REM2Q8IYK8 340 aaPredicted RBP25.24■■□□□ 1.63
LPCAT3-204ENST00000536797 OPTNQ96CV9 577 aa25.24■■□□□ 1.63
LPCAT3-204ENST00000536797 DCP1AQ9NPI6 582 aaPredicted RBP25.24■■□□□ 1.63
LPCAT3-204ENST00000536797 FAM196BA6NMK8 535 aa25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 PHF20L1A8MW92 1017 aa25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 TTC6Q86TZ1 520 aa25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 TICAM2Q86XR7 235 aa25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 FOXP4Q8IVH2 680 aaPredicted RBP25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 CRACR2BQ8N4Y2 399 aaPredicted RBP25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 ATP8A2Q9NTI2 1148 aa25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 MCM9Q9NXL9 1143 aa25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 SLC4A4Q9Y6R1 1079 aa25.23■■□□□ 1.63
LPCAT3-204ENST00000536797 PRKAB2O43741 272 aa25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 POLR3DP05423 398 aaPredicted RBP25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 HSPA1AP0DMV8 641 aaKnown RBP25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 HSPA1BP0DMV9 641 aaKnown RBP25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 ZMYM1Q5SVZ6 1142 aa25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 NOL9Q5SY16 702 aaKnown RBP25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 DDRGK1Q96HY6 314 aa25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 STRBPQ96SI9 672 aaKnown RBP25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 BEGAINQ9BUH8 593 aa25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 WBP1LQ9NX94 342 aa25.22■■□□□ 1.63
LPCAT3-204ENST00000536797 SPDYE5A6NIY4 337 aa25.21■■□□□ 1.63
LPCAT3-204ENST00000536797 M0R2C6 588 aa25.21■■□□□ 1.63
LPCAT3-204ENST00000536797 GPAA1O43292 621 aa25.21■■□□□ 1.63
LPCAT3-204ENST00000536797 ERO1BQ86YB8 467 aa25.21■■□□□ 1.63
LPCAT3-204ENST00000536797 DOCK1Q14185 1865 aa25.21■■□□□ 1.63
LPCAT3-204ENST00000536797 LAMB1P07942 1786 aa25.21■■□□□ 1.63
LPCAT3-204ENST00000536797 CTNND1O60716 968 aaKnown RBP25.2■■□□□ 1.63
LPCAT3-204ENST00000536797 GJA5P36382 358 aa25.2■■□□□ 1.63
LPCAT3-204ENST00000536797 METTL16Q86W50 562 aaKnown RBP25.2■■□□□ 1.63
LPCAT3-204ENST00000536797 SCYL3Q8IZE3 742 aa25.2■■□□□ 1.63
LPCAT3-204ENST00000536797 OTUD5Q96G74 571 aa25.2■■□□□ 1.63
LPCAT3-204ENST00000536797 BAZ2AQ9UIF9 1905 aaKnown RBP25.2■■□□□ 1.63
LPCAT3-204ENST00000536797 GNAT2P19087 354 aa25.2■■□□□ 1.62
LPCAT3-204ENST00000536797 SREBF2Q12772 1141 aa25.2■■□□□ 1.62
LPCAT3-204ENST00000536797 CNKSR2Q8WXI2 1034 aa25.2■■□□□ 1.62
LPCAT3-204ENST00000536797 SEC62Q99442 399 aaKnown RBP25.2■■□□□ 1.62
LPCAT3-204ENST00000536797 EHD4Q9H223 541 aa25.2■■□□□ 1.62
LPCAT3-204ENST00000536797 SERPINB13Q9UIV8 391 aa25.2■■□□□ 1.62
LPCAT3-204ENST00000536797 MANSC4A6NHS7 340 aaPredicted RBP25.19■■□□□ 1.62
LPCAT3-204ENST00000536797 PPATQ06203 517 aa25.19■■□□□ 1.62
LPCAT3-204ENST00000536797 TTC22Q5TAA0 569 aa25.19■■□□□ 1.62
LPCAT3-204ENST00000536797 AMOTL1Q8IY63 956 aa25.19■■□□□ 1.62
LPCAT3-204ENST00000536797 PICK1Q9NRD5 415 aa25.19■■□□□ 1.62
LPCAT3-204ENST00000536797 ATAD5Q96QE3 1844 aa25.18■■□□□ 1.62
LPCAT3-204ENST00000536797 PLCD1P51178 756 aa25.18■■□□□ 1.62
LPCAT3-204ENST00000536797 ERICH6BQ5W0A0 696 aa25.18■■□□□ 1.62
LPCAT3-204ENST00000536797 DNAJC18Q9H819 358 aa25.18■■□□□ 1.62
LPCAT3-204ENST00000536797 PPIL2Q13356 520 aa25.17■■□□□ 1.62
LPCAT3-204ENST00000536797 HELLSQ9NRZ9 838 aa25.17■■□□□ 1.62
LPCAT3-204ENST00000536797 TM4SF4P48230 202 aa25.16■■□□□ 1.62
LPCAT3-204ENST00000536797 INHBEP58166 350 aa25.16■■□□□ 1.62
LPCAT3-204ENST00000536797 GIMAP6Q6P9H5 292 aa25.16■■□□□ 1.62
LPCAT3-204ENST00000536797 GSG1L2A8MUP6 293 aa25.15■■□□□ 1.62
LPCAT3-204ENST00000536797 CA12O43570 354 aa25.15■■□□□ 1.62
LPCAT3-204ENST00000536797 CAP2P40123 477 aa25.15■■□□□ 1.62
LPCAT3-204ENST00000536797 GTF2A2P52657 109 aa25.15■■□□□ 1.62
LPCAT3-204ENST00000536797 ARPP21Q9UBL0 812 aaPredicted RBP25.15■■□□□ 1.62
LPCAT3-204ENST00000536797 PATL2C9JE40 543 aaKnown RBP25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 USP17L12C9JPN9 530 aa25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 USP17L21D6R901 530 aa25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 IRF6O14896 467 aa25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 APPP05067 770 aa25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 GSPT1P15170 499 aaKnown RBP25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 PTPRAP18433 802 aa25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 SDSP20132 328 aa25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 FAM227BQ96M60 508 aa25.14■■□□□ 1.62
LPCAT3-204ENST00000536797 HIP1O00291 1037 aa25.13■■□□□ 1.61
LPCAT3-204ENST00000536797 CYP2D6P10635 497 aa25.13■■□□□ 1.61
LPCAT3-204ENST00000536797 NMIQ13287 307 aaPredicted RBP25.13■■□□□ 1.61
LPCAT3-204ENST00000536797 RRP1BQ14684 758 aaKnown RBP25.13■■□□□ 1.61
LPCAT3-204ENST00000536797 MCMDC2Q4G0Z9 681 aa25.13■■□□□ 1.61
LPCAT3-204ENST00000536797 ZHX2Q9Y6X8 837 aa25.13■■□□□ 1.61
LPCAT3-204ENST00000536797 A0A0D9SFI3 127 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 FOXN1O15353 648 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 TDO2P48775 406 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 GABPAQ06546 454 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 SNAPC2Q13487 334 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 C12orf60Q5U649 245 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 TATDN1Q6P1N9 297 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 CTR9Q6PD62 1173 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 CCDC129Q6ZRS4 1044 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 MS4A4AQ96JQ5 239 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 NACAP1Q9BZK3 213 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 DIAPH3Q9NSV4 1193 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 TAOK2Q9UL54 1235 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 TESPA1A2RU30 521 aaPredicted RBP25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 ASNSP08243 561 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 EVX2Q03828 476 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 EPB41L4AQ9HCS5 686 aaPredicted RBP25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 GINM1Q9NU53 330 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 RNF186Q9NXI6 227 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 SAGE1Q9NXZ1 904 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 PPP4R2Q9NY27 417 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 SWAP70Q9UH65 585 aa25.12■■□□□ 1.61
LPCAT3-204ENST00000536797 PHIPQ8WWQ0 1821 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 MYH8P13535 1937 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 CYP2D7A0A087X1C5 515 aa25.11■■□□□ 1.61
LPCAT3-204ENST00000536797 CCL15-CCL14A0A0B4J2E2 113 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms