RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 DEFB115Q30KQ5 88 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 VPS53Q5VIR6 699 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 GIMAP6Q6P9H5 292 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 CTR9Q6PD62 1173 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.45□□□□□ -0.1
CHD4-203ENST00000535717 TTC6Q86TZ1 520 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 FOXP4Q8IVH2 680 aaPredicted RBP14.45□□□□□ -0.1
CHD4-203ENST00000535717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.1
CHD4-203ENST00000535717 DDRGK1Q96HY6 314 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 CLMNQ96JQ2 1002 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 WRNIP1Q96S55 665 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 CCDC171Q6TFL3 1326 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 OTOFQ9HC10 1997 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 CYP2D7A0A087X1C5 515 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 SMIM22K7EJ46 135 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 INPP5BP32019 993 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 MAP3K9P80192 1104 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 C12orf60Q5U649 245 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 RGMBQ6NW40 437 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 ANKRD13AQ8IZ07 590 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 IFNL3Q8IZI9 196 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 ZKSCAN4Q969J2 545 aaPredicted RBP14.44□□□□□ -0.1
CHD4-203ENST00000535717 EHD4Q9H223 541 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 IL25Q9H293 177 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 DNAJC18Q9H819 358 aa14.44□□□□□ -0.1
CHD4-203ENST00000535717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHD4-203ENST00000535717 HERC5Q9UII4 1024 aaKnown RBP14.44□□□□□ -0.1
CHD4-203ENST00000535717 UNCXA6NJT0 531 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 TDO2P48775 406 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 ZNF157P51786 506 aaPredicted RBP14.43□□□□□ -0.1
CHD4-203ENST00000535717 MFAP1P55081 439 aaKnown RBP14.43□□□□□ -0.1
CHD4-203ENST00000535717 VGLL4Q14135 290 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 RRP1BQ14684 758 aaKnown RBP14.43□□□□□ -0.1
CHD4-203ENST00000535717 SBK1Q52WX2 424 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 CYP4F22Q6NT55 531 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 PAXIP1Q6ZW49 1069 aaPredicted RBP14.43□□□□□ -0.1
CHD4-203ENST00000535717 CRACR2BQ8N4Y2 399 aaPredicted RBP14.43□□□□□ -0.1
CHD4-203ENST00000535717 DNAJC5GQ8N7S2 189 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 SLC10A4Q96EP9 437 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 NACAP1Q9BZK3 213 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.43□□□□□ -0.1
CHD4-203ENST00000535717 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
CHD4-203ENST00000535717 HSPD1P10809 573 aaKnown RBP14.42□□□□□ -0.1
CHD4-203ENST00000535717 VEGFBP49765 207 aa14.42□□□□□ -0.1
CHD4-203ENST00000535717 GABPAQ06546 454 aa14.42□□□□□ -0.1
CHD4-203ENST00000535717 RUFY2Q8WXA3 655 aa14.42□□□□□ -0.1
CHD4-203ENST00000535717 DYNLL2Q96FJ2 89 aa14.42□□□□□ -0.1
CHD4-203ENST00000535717 CAPNS2Q96L46 248 aa14.42□□□□□ -0.1
CHD4-203ENST00000535717 TRIM34Q9BYJ4 488 aa14.42□□□□□ -0.1
CHD4-203ENST00000535717 ELP3Q9H9T3 547 aa14.42□□□□□ -0.1
CHD4-203ENST00000535717 ARPP21Q9UBL0 812 aaPredicted RBP14.42□□□□□ -0.1
CHD4-203ENST00000535717 SNCAIPQ9Y6H5 919 aa14.42□□□□□ -0.1
CHD4-203ENST00000535717 RAD50Q92878 1312 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 MINDY4BA8MYZ0 360 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 FAM155AB1AL88 458 aaPredicted RBP14.41□□□□□ -0.1
CHD4-203ENST00000535717 SGSM2O43147 1006 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 GRM1Q13255 1194 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 ALX1Q15699 326 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 RASAL3Q86YV0 1011 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 AMOTL1Q8IY63 956 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 CCDC102AQ96A19 550 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 NAPBQ9H115 298 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 CSADQ9Y600 493 aa14.41□□□□□ -0.1
CHD4-203ENST00000535717 CTNND1O60716 968 aaKnown RBP14.4□□□□□ -0.1
CHD4-203ENST00000535717 CDC45O75419 566 aa14.4□□□□□ -0.1
CHD4-203ENST00000535717 FGAP02671 866 aa14.4□□□□□ -0.1
CHD4-203ENST00000535717 SLC10A3P09131 477 aa14.4□□□□□ -0.1
CHD4-203ENST00000535717 SHMT1P34896 483 aa14.4□□□□□ -0.1
CHD4-203ENST00000535717 JAG1P78504 1218 aa14.4□□□□□ -0.1
CHD4-203ENST00000535717 NOL9Q5SY16 702 aaKnown RBP14.4□□□□□ -0.1
CHD4-203ENST00000535717 TATDN1Q6P1N9 297 aa14.4□□□□□ -0.1
CHD4-203ENST00000535717 SLC44A5Q8NCS7 719 aa14.4□□□□□ -0.1
CHD4-203ENST00000535717 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
CHD4-203ENST00000535717 WDR33Q9C0J8 1336 aaKnown RBP14.4□□□□□ -0.1
CHD4-203ENST00000535717 PCNTO95613 3336 aa14.4□□□□□ -0.11
CHD4-203ENST00000535717 AOC2O75106 756 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 GJA5P36382 358 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 CAP2P40123 477 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 ECE1P42892 770 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 SHROOM1Q2M3G4 852 aaPredicted RBP14.39□□□□□ -0.11
CHD4-203ENST00000535717 SPRYD7Q5W111 196 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 C16orf86Q6ZW13 317 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 SCYL3Q8IZE3 742 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 WNK4Q96J92 1243 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 ESYT1Q9BSJ8 1104 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 DSCC1Q9BVC3 393 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 ZMYM6O95789 1325 aa14.39□□□□□ -0.11
CHD4-203ENST00000535717 ROBO3Q96MS0 1386 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 LAMB1P07942 1786 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 SPDYE5A6NIY4 337 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 GDF11O95390 407 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 CDK8P49336 464 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 PPARAQ07869 468 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 MKRN3Q13064 507 aaKnown RBP14.38□□□□□ -0.11
CHD4-203ENST00000535717 ERO1BQ86YB8 467 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 STK11IPQ8N1F8 1099 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
CHD4-203ENST00000535717 ZIC5Q96T25 663 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms