RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 LRRC4CQ9HCJ2 640 aa8.78□□□□□ -1
PRKDC-205ENST00000535375 FOSL1P15407 271 aa8.77□□□□□ -1.01
PRKDC-205ENST00000535375 CD97P48960 835 aa8.77□□□□□ -1.01
PRKDC-205ENST00000535375 RING1Q06587 406 aa8.77□□□□□ -1.01
PRKDC-205ENST00000535375 CAMK2GQ13555 558 aaPredicted RBP8.77□□□□□ -1.01
PRKDC-205ENST00000535375 CYFIP1Q7L576 1253 aa8.77□□□□□ -1.01
PRKDC-205ENST00000535375 TMEM74Q96NL1 305 aa8.77□□□□□ -1.01
PRKDC-205ENST00000535375 RBM47A0AV96 593 aaKnown RBP8.76□□□□□ -1.01
PRKDC-205ENST00000535375 BPNT1O95861 308 aa8.76□□□□□ -1.01
PRKDC-205ENST00000535375 LMNB2Q03252 620 aa8.76□□□□□ -1.01
PRKDC-205ENST00000535375 CCDC84Q86UT8 332 aaPredicted RBP8.76□□□□□ -1.01
PRKDC-205ENST00000535375 TMEM87AQ8NBN3 555 aa8.76□□□□□ -1.01
PRKDC-205ENST00000535375 MINDY4BA8MYZ0 360 aa8.75□□□□□ -1.01
PRKDC-205ENST00000535375 PF4P02776 101 aa8.75□□□□□ -1.01
PRKDC-205ENST00000535375 CDK8P49336 464 aa8.75□□□□□ -1.01
PRKDC-205ENST00000535375 RPL6Q02878 288 aaKnown RBP8.75□□□□□ -1.01
PRKDC-205ENST00000535375 HS2ST1Q7LGA3 356 aa8.75□□□□□ -1.01
PRKDC-205ENST00000535375 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
PRKDC-205ENST00000535375 GGT7Q9UJ14 662 aa8.75□□□□□ -1.01
PRKDC-205ENST00000535375 MED26O95402 600 aa8.74□□□□□ -1.01
PRKDC-205ENST00000535375 HOXA10P31260 410 aaPredicted RBP8.74□□□□□ -1.01
PRKDC-205ENST00000535375 SNAP47Q5SQN1 464 aa8.74□□□□□ -1.01
PRKDC-205ENST00000535375 ARHGAP27Q6ZUM4 889 aa8.74□□□□□ -1.01
PRKDC-205ENST00000535375 TOP6BLQ8N6T0 577 aa8.74□□□□□ -1.01
PRKDC-205ENST00000535375 GFRA2O00451 464 aa8.73□□□□□ -1.01
PRKDC-205ENST00000535375 GRK4P32298 578 aa8.73□□□□□ -1.01
PRKDC-205ENST00000535375 NTF4P34130 210 aa8.73□□□□□ -1.01
PRKDC-205ENST00000535375 PDE4BQ07343 736 aa8.73□□□□□ -1.01
PRKDC-205ENST00000535375 HID1Q8IV36 788 aa8.73□□□□□ -1.01
PRKDC-205ENST00000535375 DUSP23Q9BVJ7 150 aa8.73□□□□□ -1.01
PRKDC-205ENST00000535375 KBTBD4Q9NVX7 518 aa8.73□□□□□ -1.01
PRKDC-205ENST00000535375 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
PRKDC-205ENST00000535375 TACC3Q9Y6A5 838 aa8.73□□□□□ -1.01
PRKDC-205ENST00000535375 KIAA1324LA8MWY0 1029 aaPredicted RBP8.72□□□□□ -1.01
PRKDC-205ENST00000535375 LEFTY1O75610 366 aa8.72□□□□□ -1.01
PRKDC-205ENST00000535375 FAM160A1Q05DH4 1040 aa8.72□□□□□ -1.01
PRKDC-205ENST00000535375 BNC2Q6ZN30 1099 aaPredicted RBP8.72□□□□□ -1.01
PRKDC-205ENST00000535375 ARMCX6Q7L4S7 300 aa8.72□□□□□ -1.01
PRKDC-205ENST00000535375 PRDM10Q9NQV6 1147 aa8.72□□□□□ -1.01
PRKDC-205ENST00000535375 LRIG2O94898 1065 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 PGRP06401 933 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 ERMP1Q7Z2K6 904 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 UBE3DQ7Z6J8 389 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 GOLM1Q8NBJ4 401 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 GATAD2BQ8WXI9 593 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 RHOVQ96L33 236 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 PSMG3-AS1Q96PY0 264 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 BACH2Q9BYV9 841 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 FOXQ1Q9C009 403 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 COPRSQ9NQ92 184 aa8.71□□□□□ -1.02
PRKDC-205ENST00000535375 F13A1P00488 732 aa8.7□□□□□ -1.02
PRKDC-205ENST00000535375 DTX1Q86Y01 620 aa8.7□□□□□ -1.02
PRKDC-205ENST00000535375 WNT11O96014 354 aa8.69□□□□□ -1.02
PRKDC-205ENST00000535375 ZNF76P36508 570 aa8.69□□□□□ -1.02
PRKDC-205ENST00000535375 MFSD2AQ8NA29 543 aa8.69□□□□□ -1.02
PRKDC-205ENST00000535375 FBRSQ9HAH7 460 aa8.69□□□□□ -1.02
PRKDC-205ENST00000535375 BSDC1Q9NW68 430 aaPredicted RBP8.69□□□□□ -1.02
PRKDC-205ENST00000535375 ZC3H7BQ9UGR2 993 aaKnown RBP8.69□□□□□ -1.02
PRKDC-205ENST00000535375 GTF2IRD1Q9UHL9 959 aa8.69□□□□□ -1.02
PRKDC-205ENST00000535375 ANGEL1Q9UNK9 670 aaKnown RBP8.69□□□□□ -1.02
PRKDC-205ENST00000535375 CILPO75339 1184 aa8.68□□□□□ -1.02
PRKDC-205ENST00000535375 SPINK2P20155 84 aa8.68□□□□□ -1.02
PRKDC-205ENST00000535375 EIF4A3P38919 411 aaKnown RBP8.68□□□□□ -1.02
PRKDC-205ENST00000535375 SUPT16HQ9Y5B9 1047 aaKnown RBP8.68□□□□□ -1.02
PRKDC-205ENST00000535375 FAM221AA4D161 298 aa8.67□□□□□ -1.02
PRKDC-205ENST00000535375 CAP2P40123 477 aa8.67□□□□□ -1.02
PRKDC-205ENST00000535375 SLBPQ14493 270 aaKnown RBP eCLIP8.67□□□□□ -1.02
PRKDC-205ENST00000535375 NKG7Q16617 165 aa8.67□□□□□ -1.02
PRKDC-205ENST00000535375 MSMPQ1L6U9 139 aa8.67□□□□□ -1.02
PRKDC-205ENST00000535375 FAM181AQ8N9Y4 354 aa8.67□□□□□ -1.02
PRKDC-205ENST00000535375 RGS22Q8NE09 1264 aa8.67□□□□□ -1.02
PRKDC-205ENST00000535375 ROBO2Q9HCK4 1378 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 CST3P01034 146 aaPredicted RBP8.66□□□□□ -1.02
PRKDC-205ENST00000535375 PLCG1P19174 1290 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 MPP2Q14168 576 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 PRAMEF13Q5VWM6 474 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 SLC6A19Q695T7 634 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 NETO1Q8TDF5 533 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 XAGE3Q8WTP9 111 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 MIPEPQ99797 713 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 PRDM5Q9NQX1 630 aaPredicted RBP8.66□□□□□ -1.02
PRKDC-205ENST00000535375 ADAM30Q9UKF2 790 aa8.66□□□□□ -1.02
PRKDC-205ENST00000535375 TPX2Q9ULW0 747 aaKnown RBP8.66□□□□□ -1.02
PRKDC-205ENST00000535375 TLR3O15455 904 aaKnown RBP8.65□□□□□ -1.02
PRKDC-205ENST00000535375 FBXL19Q6PCT2 694 aa8.65□□□□□ -1.02
PRKDC-205ENST00000535375 FAM196AQ6ZSG2 479 aa8.65□□□□□ -1.02
PRKDC-205ENST00000535375 MRPL41Q8IXM3 137 aaKnown RBP8.65□□□□□ -1.02
PRKDC-205ENST00000535375 ZNF296Q8WUU4 475 aaPredicted RBP8.65□□□□□ -1.02
PRKDC-205ENST00000535375 TMEM87BQ96K49 555 aa8.65□□□□□ -1.02
PRKDC-205ENST00000535375 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
PRKDC-205ENST00000535375 METTL5Q9NRN9 209 aaKnown RBP8.65□□□□□ -1.02
PRKDC-205ENST00000535375 TJP2Q9UDY2 1190 aa8.65□□□□□ -1.02
PRKDC-205ENST00000535375 GNAT3A8MTJ3 354 aa8.64□□□□□ -1.03
PRKDC-205ENST00000535375 GRIN3BO60391 1043 aa8.64□□□□□ -1.03
PRKDC-205ENST00000535375 SLITRK5O94991 958 aa8.64□□□□□ -1.03
PRKDC-205ENST00000535375 IFI16Q16666 785 aaKnown RBP8.64□□□□□ -1.03
PRKDC-205ENST00000535375 CWF19L2Q2TBE0 894 aaKnown RBP8.64□□□□□ -1.03
PRKDC-205ENST00000535375 ZNF746Q6NUN9 644 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-205ENST00000535375 LETMD1Q6P1Q0 360 aa8.64□□□□□ -1.03
PRKDC-205ENST00000535375 MCATQ8IVS2 390 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms