RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 TTF1Q15361 905 aaPredicted RBP28.36■■■□□ 2.13
YIF1A-213ENST00000534374 GPAT2Q6NUI2 795 aa28.36■■■□□ 2.13
YIF1A-213ENST00000534374 MAST2Q6P0Q8 1798 aa28.35■■■□□ 2.13
YIF1A-213ENST00000534374 PDE4DIPQ5VU43 2346 aa28.35■■■□□ 2.13
YIF1A-213ENST00000534374 APBB1O00213 710 aa28.35■■■□□ 2.13
YIF1A-213ENST00000534374 METTL16Q86W50 562 aaKnown RBP28.35■■■□□ 2.13
YIF1A-213ENST00000534374 MAGEB6Q8N7X4 407 aa28.35■■■□□ 2.13
YIF1A-213ENST00000534374 NDUFB9Q9Y6M9 179 aa28.35■■■□□ 2.13
YIF1A-213ENST00000534374 CAP2P40123 477 aa28.34■■■□□ 2.13
YIF1A-213ENST00000534374 KIF22Q14807 665 aa28.34■■■□□ 2.13
YIF1A-213ENST00000534374 MAPKAPK5Q8IW41 473 aa28.34■■■□□ 2.13
YIF1A-213ENST00000534374 TBC1D2Q9BYX2 928 aa28.34■■■□□ 2.13
YIF1A-213ENST00000534374 SLC45A1Q9Y2W3 748 aa28.34■■■□□ 2.13
YIF1A-213ENST00000534374 FLT1P17948 1338 aa28.34■■■□□ 2.13
YIF1A-213ENST00000534374 HTTP42858 3142 aa28.33■■■□□ 2.13
YIF1A-213ENST00000534374 FAM196BA6NMK8 535 aa28.33■■■□□ 2.13
YIF1A-213ENST00000534374 GNRH1P01148 92 aa28.33■■■□□ 2.13
YIF1A-213ENST00000534374 LACTBP83111 547 aaPredicted RBP28.33■■■□□ 2.13
YIF1A-213ENST00000534374 DYNLL1P63167 89 aaKnown RBP28.32■■■□□ 2.12
YIF1A-213ENST00000534374 PARK7Q99497 189 aaKnown RBP28.32■■■□□ 2.12
YIF1A-213ENST00000534374 PALD1Q9ULE6 856 aa28.31■■■□□ 2.12
YIF1A-213ENST00000534374 ADGRA2Q96PE1 1338 aa28.31■■■□□ 2.12
YIF1A-213ENST00000534374 DOCK1Q14185 1865 aa28.31■■■□□ 2.12
YIF1A-213ENST00000534374 MIGA1Q8NAN2 632 aa28.3■■■□□ 2.12
YIF1A-213ENST00000534374 CPA4Q9UI42 421 aa28.3■■■□□ 2.12
YIF1A-213ENST00000534374 CENPFP49454 3210 aa28.3■■■□□ 2.12
YIF1A-213ENST00000534374 KIAA0100Q14667 2235 aaKnown RBP28.3■■■□□ 2.12
YIF1A-213ENST00000534374 TRIM75PA6NK02 468 aa28.29■■■□□ 2.12
YIF1A-213ENST00000534374 RRP1BQ14684 758 aaKnown RBP28.29■■■□□ 2.12
YIF1A-213ENST00000534374 GADL1Q6ZQY3 521 aa28.29■■■□□ 2.12
YIF1A-213ENST00000534374 ZNF280CQ8ND82 737 aa28.29■■■□□ 2.12
YIF1A-213ENST00000534374 ARMC5Q96C12 935 aa28.29■■■□□ 2.12
YIF1A-213ENST00000534374 GINM1Q9NU53 330 aa28.29■■■□□ 2.12
YIF1A-213ENST00000534374 PHIPQ8WWQ0 1821 aa28.29■■■□□ 2.12
YIF1A-213ENST00000534374 CDK5RAP2Q96SN8 1893 aa28.28■■■□□ 2.12
YIF1A-213ENST00000534374 USP17L5A8MUK1 530 aa28.28■■■□□ 2.12
YIF1A-213ENST00000534374 SLC34A2O95436 690 aa28.28■■■□□ 2.12
YIF1A-213ENST00000534374 HLA-DOAP06340 250 aa28.28■■■□□ 2.12
YIF1A-213ENST00000534374 PRMT2P55345 433 aa28.28■■■□□ 2.12
YIF1A-213ENST00000534374 LRRCC1Q9C099 1032 aa28.28■■■□□ 2.12
YIF1A-213ENST00000534374 FOCADQ5VW36 1801 aa28.27■■■□□ 2.12
YIF1A-213ENST00000534374 ATP5JP18859 108 aa28.27■■■□□ 2.12
YIF1A-213ENST00000534374 SPP2Q13103 211 aa28.27■■■□□ 2.12
YIF1A-213ENST00000534374 SLC9C2Q5TAH2 1124 aa28.27■■■□□ 2.12
YIF1A-213ENST00000534374 CRACR2BQ8N4Y2 399 aaPredicted RBP28.27■■■□□ 2.12
YIF1A-213ENST00000534374 TRIM34Q9BYJ4 488 aa28.27■■■□□ 2.12
YIF1A-213ENST00000534374 ARHGAP39Q9C0H5 1083 aa28.27■■■□□ 2.12
YIF1A-213ENST00000534374 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.27■■■□□ 2.12
YIF1A-213ENST00000534374 PTPRFP10586 1907 aa28.26■■■□□ 2.11
YIF1A-213ENST00000534374 ASNSP08243 561 aa28.26■■■□□ 2.11
YIF1A-213ENST00000534374 CYP2C8P10632 490 aa28.26■■■□□ 2.11
YIF1A-213ENST00000534374 BCRP11274 1271 aa28.26■■■□□ 2.11
YIF1A-213ENST00000534374 USP5P45974 858 aa28.26■■■□□ 2.11
YIF1A-213ENST00000534374 CCDC84Q86UT8 332 aaPredicted RBP28.26■■■□□ 2.11
YIF1A-213ENST00000534374 PROCA1Q8NCQ7 364 aaPredicted RBP28.26■■■□□ 2.11
YIF1A-213ENST00000534374 RIOK1Q9BRS2 568 aaKnown RBP28.26■■■□□ 2.11
YIF1A-213ENST00000534374 DNAJC18Q9H819 358 aa28.26■■■□□ 2.11
YIF1A-213ENST00000534374 AS3MTQ9HBK9 375 aa28.26■■■□□ 2.11
YIF1A-213ENST00000534374 AGTPBP1Q9UPW5 1226 aa28.26■■■□□ 2.11
YIF1A-213ENST00000534374 TNRC18O15417 2968 aaPredicted RBP28.26■■■□□ 2.11
YIF1A-213ENST00000534374 GOLIM4O00461 696 aa28.25■■■□□ 2.11
YIF1A-213ENST00000534374 PDE6AP16499 860 aa28.25■■■□□ 2.11
YIF1A-213ENST00000534374 NBPF11Q86T75 865 aa28.25■■■□□ 2.11
YIF1A-213ENST00000534374 DNAJC2Q99543 621 aaKnown RBP28.25■■■□□ 2.11
YIF1A-213ENST00000534374 WDR18Q9BV38 432 aa28.25■■■□□ 2.11
YIF1A-213ENST00000534374 DCTPP1Q9H773 170 aa28.25■■■□□ 2.11
YIF1A-213ENST00000534374 SAP30BPQ9UHR5 308 aaKnown RBP28.25■■■□□ 2.11
YIF1A-213ENST00000534374 MAGEB6P1A0A0J9YX57 407 aa28.24■■■□□ 2.11
YIF1A-213ENST00000534374 HOXD10P28358 340 aa28.24■■■□□ 2.11
YIF1A-213ENST00000534374 PSMC4P43686 418 aa28.24■■■□□ 2.11
YIF1A-213ENST00000534374 BCL11AQ9H165 835 aa28.24■■■□□ 2.11
YIF1A-213ENST00000534374 PTCH2Q9Y6C5 1203 aa28.24■■■□□ 2.11
YIF1A-213ENST00000534374 SH3D19Q5HYK7 790 aa28.23■■■□□ 2.11
YIF1A-213ENST00000534374 TTC6Q86TZ1 520 aa28.23■■■□□ 2.11
YIF1A-213ENST00000534374 HAUS7Q99871 368 aa28.23■■■□□ 2.11
YIF1A-213ENST00000534374 BOLA2Q9H3K6 86 aa28.23■■■□□ 2.11
YIF1A-213ENST00000534374 SIPA1L1O43166 1804 aa28.22■■■□□ 2.11
YIF1A-213ENST00000534374 EHD4Q9H223 541 aa28.22■■■□□ 2.11
YIF1A-213ENST00000534374 PAG1Q9NWQ8 432 aa28.22■■■□□ 2.11
YIF1A-213ENST00000534374 PNMA3Q9UL41 463 aa28.22■■■□□ 2.11
YIF1A-213ENST00000534374 ZNF532Q9HCE3 1301 aa28.21■■■□□ 2.11
YIF1A-213ENST00000534374 TCRBV5S4A2TA0A5A2 114 aa28.21■■■□□ 2.11
YIF1A-213ENST00000534374 CTGFP29279 349 aa28.21■■■□□ 2.11
YIF1A-213ENST00000534374 SLC9C1Q4G0N8 1177 aa28.21■■■□□ 2.11
YIF1A-213ENST00000534374 TRIM47Q96LD4 638 aa28.21■■■□□ 2.11
YIF1A-213ENST00000534374 SRRDQ9UH36 339 aa28.21■■■□□ 2.11
YIF1A-213ENST00000534374 SERPINB13Q9UIV8 391 aa28.21■■■□□ 2.11
YIF1A-213ENST00000534374 MYH1P12882 1939 aa28.21■■■□□ 2.11
YIF1A-213ENST00000534374 FMNL1O95466 1100 aaPredicted RBP28.2■■■□□ 2.1
YIF1A-213ENST00000534374 PABPC4Q13310 644 aaKnown RBP eCLIP28.2■■■□□ 2.12e-6■■■□□ 15.8
YIF1A-213ENST00000534374 TREML2Q5T2D2 321 aa28.2■■■□□ 2.1
YIF1A-213ENST00000534374 TATDN1Q6P1N9 297 aa28.2■■■□□ 2.1
YIF1A-213ENST00000534374 SMCR8Q8TEV9 937 aaPredicted RBP28.2■■■□□ 2.1
YIF1A-213ENST00000534374 ZNF333Q96JL9 665 aa28.2■■■□□ 2.1
YIF1A-213ENST00000534374 CRNKL1Q9BZJ0 848 aaKnown RBP28.2■■■□□ 2.1
YIF1A-213ENST00000534374 ATAD5Q96QE3 1844 aa28.2■■■□□ 2.1
YIF1A-213ENST00000534374 C19orf81C9J6K1 198 aa28.19■■■□□ 2.1
YIF1A-213ENST00000534374 HMGCS2P54868 508 aa28.19■■■□□ 2.1
YIF1A-213ENST00000534374 BACE1P56817 501 aa28.19■■■□□ 2.1
YIF1A-213ENST00000534374 JAG1P78504 1218 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms