RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 KDM5AP29375 1690 aaKnown RBP7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 MYO5BQ9ULV0 1848 aa7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 WDR64B1ANS9 1081 aa7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 MAP4P27816 1152 aaKnown RBP7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 USP5P45974 858 aa7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 SMG8Q8ND04 991 aaKnown RBP7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 GOLGA2P5Q9HBQ8 144 aa7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 FOXD3Q9UJU5 478 aaPredicted RBP7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 CEP170BQ9Y4F5 1589 aaPredicted RBP7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 SPHKAPQ2M3C7 1700 aa7.58□□□□□ -1.2
CLNS1A-212ENST00000533957 STRCQ7RTU9 1775 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 PAX4O43316 350 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 FZD6O60353 706 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 DLGAP3O95886 979 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 TAL1P17542 331 aaPredicted RBP7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 ANP32AP39687 249 aaKnown RBP7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 FKBP4Q02790 459 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 PEAR1Q5VY43 1037 aaPredicted RBP7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 PHLDB3Q6NSJ2 640 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 ASAP3Q8TDY4 903 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 SNX29Q8TEQ0 813 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 USP26Q9BXU7 913 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 BHLHE41Q9C0J9 482 aaPredicted RBP7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 SUGCTQ9HAC7 445 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 PTPRTO14522 1441 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 UBR1Q8IWV7 1749 aa7.57□□□□□ -1.2
CLNS1A-212ENST00000533957 KIAA1210Q9ULL0 1709 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 NPATQ14207 1427 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 LOC100289279A0A1B0GTE1 492 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 WNT11O96014 354 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 ESRRAP11474 423 aaPredicted RBP7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 SF3B2Q13435 895 aaKnown RBP7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 CCDC184Q52MB2 194 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 SGO2Q562F6 1265 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 ZNF326Q5BKZ1 582 aaKnown RBP7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 EXOSC6Q5RKV6 272 aaKnown RBP7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 MFSD14AQ96MC6 490 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 ZFYVE28Q9HCC9 887 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 CYP4F12Q9HCS2 524 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 LATS2Q9NRM7 1088 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 USP35Q9P2H5 1018 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 KNSTRNQ9Y448 316 aa7.56□□□□□ -1.2
CLNS1A-212ENST00000533957 SYNMO15061 1565 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 TIAF1O95411 115 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 MLECQ14165 292 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 CCDC82Q8N4S0 544 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 TESK2Q96S53 571 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 CCDC87Q9NVE4 849 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 RCAN3Q9UKA8 241 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 MTMR7Q9Y216 660 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 AMOTL2Q9Y2J4 779 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 PIK3C2BO00750 1634 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
CLNS1A-212ENST00000533957 RPGRIP1LQ68CZ1 1315 aa7.54□□□□□ -1.2
CLNS1A-212ENST00000533957 DRD2P14416 443 aa7.54□□□□□ -1.2
CLNS1A-212ENST00000533957 RXRBP28702 533 aa7.54□□□□□ -1.2
CLNS1A-212ENST00000533957 HOXA10P31260 410 aaPredicted RBP7.54□□□□□ -1.2
CLNS1A-212ENST00000533957 FMNL2Q96PY5 1086 aa7.54□□□□□ -1.2
CLNS1A-212ENST00000533957 PIM2Q9P1W9 311 aa7.54□□□□□ -1.2
CLNS1A-212ENST00000533957 PLA2R1Q13018 1463 aa7.54□□□□□ -1.2
CLNS1A-212ENST00000533957 SCAF11Q99590 1463 aaKnown RBP7.54□□□□□ -1.2
CLNS1A-212ENST00000533957 TRPM2O94759 1503 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 F13BP05160 661 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 RRP1P56182 461 aaKnown RBP7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 GSTM4Q03013 218 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 GJD3Q8N144 294 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 FBXL6Q8N531 539 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 GIMAP7Q8NHV1 300 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 ERVK-7P63135 1459 aa7.53□□□□□ -1.2
CLNS1A-212ENST00000533957 PIK3C2GO75747 1445 aa7.52□□□□□ -1.2
CLNS1A-212ENST00000533957 BLMP54132 1417 aaPredicted RBP7.52□□□□□ -1.2
CLNS1A-212ENST00000533957 ARHGAP31Q2M1Z3 1444 aa7.52□□□□□ -1.2
CLNS1A-212ENST00000533957 NINLQ9Y2I6 1382 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 FAM95CA0A1B0GW59 222 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 METTL12A8MUP2 240 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 ABL1P00519 1130 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 POLR3DP05423 398 aaPredicted RBP7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 TXKP42681 527 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 USP11P51784 963 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 NFKBIBQ15653 356 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 IPO9Q96P70 1041 aaKnown RBP7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 PANK3Q9H999 370 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 ANO2Q9NQ90 1003 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 LEMD3Q9Y2U8 911 aa7.52□□□□□ -1.21
CLNS1A-212ENST00000533957 MYOM2P54296 1465 aa7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 ZMYM3Q14202 1370 aa7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 KIF1BO60333 1816 aa7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 KIF3BO15066 747 aa7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 SOX4Q06945 474 aaPredicted RBP7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 WDR43Q15061 677 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 ZNF423Q2M1K9 1284 aa7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 CDPF1Q6NVV7 123 aa7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 SHISA5Q8N114 240 aa7.51□□□□□ -1.21
CLNS1A-212ENST00000533957 FBLIM1Q8WUP2 373 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms