RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 USP6NLQ92738 828 aa13.48□□□□□ -0.25
CSDE1-215ENST00000533818 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
CSDE1-215ENST00000533818 MAST3O60307 1309 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 PRR33A8MZF0 331 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 PI4K2BG5E9Z4 385 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
CSDE1-215ENST00000533818 CTNND1O60716 968 aaKnown RBP13.47□□□□□ -0.25
CSDE1-215ENST00000533818 FOXK2Q01167 660 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 FPGSQ05932 587 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 UBE4AQ14139 1066 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 SNX17Q15036 470 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 LDHAL6AQ6ZMR3 332 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
CSDE1-215ENST00000533818 CCAR1Q8IX12 1150 aaKnown RBP13.47□□□□□ -0.25
CSDE1-215ENST00000533818 MICALL1Q8N3F8 863 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 PBX4Q9BYU1 374 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 CNNM1Q9NRU3 951 aa13.47□□□□□ -0.25
CSDE1-215ENST00000533818 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.47□□□□□ -0.25
CSDE1-215ENST00000533818 GRXCR1A8MXD5 290 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 KBTBD13C9JR72 458 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 ERC2O15083 957 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 RAG1P15918 1043 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 MAPK4P31152 587 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 TLE2Q04725 743 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 GCKRQ14397 625 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 GPRC5AQ8NFJ5 357 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 APBA2Q99767 749 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 FAM198AQ9UFP1 575 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 CHMP3Q9Y3E7 222 aa13.46□□□□□ -0.25
CSDE1-215ENST00000533818 PLXNB2O15031 1838 aa13.46□□□□□ -0.26
CSDE1-215ENST00000533818 PEX10O60683 326 aa13.45□□□□□ -0.26
CSDE1-215ENST00000533818 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
CSDE1-215ENST00000533818 CASP7P55210 303 aa13.45□□□□□ -0.26
CSDE1-215ENST00000533818 SPP2Q13103 211 aa13.45□□□□□ -0.26
CSDE1-215ENST00000533818 MORN1Q5T089 497 aa13.45□□□□□ -0.26
CSDE1-215ENST00000533818 SUGT1Q9Y2Z0 365 aa13.45□□□□□ -0.26
CSDE1-215ENST00000533818 MYO9BQ13459 2157 aa13.45□□□□□ -0.26
CSDE1-215ENST00000533818 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
CSDE1-215ENST00000533818 TLL1O43897 1013 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 ADCYAP1R1P41586 468 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 HMGCS2P54868 508 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 TAF7LQ5H9L4 462 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 FBXO33Q7Z6M2 555 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 HERVK_113Q902F9 699 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 FERMT2Q96AC1 680 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 ZNF594Q96JF6 807 aaPredicted RBP13.44□□□□□ -0.26
CSDE1-215ENST00000533818 FBXL18Q96ME1 805 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 MSRAQ9UJ68 235 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 ATRNL1Q5VV63 1379 aa13.44□□□□□ -0.26
CSDE1-215ENST00000533818 UTYO14607 1347 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 AK9Q5TCS8 1911 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 KIAA0355O15063 1070 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 CLTBP09497 229 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
CSDE1-215ENST00000533818 C1orf53Q5VUE5 145 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 GPR142Q7Z601 462 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 PLEKHH3Q7Z736 793 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 EDC3Q96F86 508 aaKnown RBP13.43□□□□□ -0.26
CSDE1-215ENST00000533818 TXNRD2Q9NNW7 524 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 REV3LO60673 3130 aa13.43□□□□□ -0.26
CSDE1-215ENST00000533818 MAP3K10Q02779 954 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 MAP2K5Q13163 448 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 CCDC57Q2TAC2 916 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 CCDC30Q5VVM6 783 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 ZSCAN29Q8IWY8 852 aaPredicted RBP13.42□□□□□ -0.26
CSDE1-215ENST00000533818 ZNF280CQ8ND82 737 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.26
CSDE1-215ENST00000533818 PORCNQ9H237 461 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 KCNH6Q9H252 994 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 SLC28A3Q9HAS3 691 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 CWC22Q9HCG8 908 aaKnown RBP13.42□□□□□ -0.26
CSDE1-215ENST00000533818 FLRT1Q9NZU1 646 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
CSDE1-215ENST00000533818 ST18O60284 1047 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 SLURP2P0DP57 97 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 FOXO4P98177 505 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 ATP2B2Q01814 1243 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 RAB30Q15771 203 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 Q3C1V9 767 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 CAVIN4Q5BKX8 364 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 TMEM39AQ9NV64 488 aa13.41□□□□□ -0.26
CSDE1-215ENST00000533818 CYP2C19P33261 490 aa13.4□□□□□ -0.26
CSDE1-215ENST00000533818 HERVK_113P62684 666 aa13.4□□□□□ -0.26
CSDE1-215ENST00000533818 ANO1Q5XXA6 986 aa13.4□□□□□ -0.26
CSDE1-215ENST00000533818 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
CSDE1-215ENST00000533818 CHMP4AQ9BY43 222 aa13.4□□□□□ -0.26
CSDE1-215ENST00000533818 NKX2-4Q9H2Z4 354 aa13.4□□□□□ -0.26
CSDE1-215ENST00000533818 RBPJLQ9UBG7 517 aa13.4□□□□□ -0.26
CSDE1-215ENST00000533818 COG5Q9UP83 839 aa13.4□□□□□ -0.26
CSDE1-215ENST00000533818 CHD7Q9P2D1 2997 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 PTPRFP10586 1907 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 RGS3P49796 1198 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 ERVK-9P63128 1117 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 ERVK-24P63145 666 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms