RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 PTPRCP08575 1304 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 RFX7Q2KHR2 1363 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 A0A0C4DFX4 3053 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 SEMA3EO15041 775 aa11.49□□□□□ -0.57
PACS1-214ENST00000533811 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
PACS1-214ENST00000533811 LRIT3Q3SXY7 679 aa11.49□□□□□ -0.57
PACS1-214ENST00000533811 ASCC2Q9H1I8 757 aaPredicted RBP11.49□□□□□ -0.57
PACS1-214ENST00000533811 PA2G4Q9UQ80 394 aaKnown RBP11.49□□□□□ -0.57
PACS1-214ENST00000533811 MROH7-TTC4A0A0A0MT08 1334 aa11.49□□□□□ -0.57
PACS1-214ENST00000533811 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
PACS1-214ENST00000533811 MDM2Q00987 491 aaPredicted RBP11.48□□□□□ -0.57
PACS1-214ENST00000533811 MAP3K10Q02779 954 aa11.48□□□□□ -0.57
PACS1-214ENST00000533811 SPTY2D1Q68D10 685 aaPredicted RBP11.48□□□□□ -0.57
PACS1-214ENST00000533811 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
PACS1-214ENST00000533811 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
PACS1-214ENST00000533811 ZNF280CQ8ND82 737 aa11.48□□□□□ -0.57
PACS1-214ENST00000533811 TRIB2Q92519 343 aa11.48□□□□□ -0.57
PACS1-214ENST00000533811 COL25A1Q9BXS0 654 aaPredicted RBP11.48□□□□□ -0.57
PACS1-214ENST00000533811 GJD2Q9UKL4 321 aa11.48□□□□□ -0.57
PACS1-214ENST00000533811 PFASO15067 1338 aa11.47□□□□□ -0.57
PACS1-214ENST00000533811 PEX10O60683 326 aa11.47□□□□□ -0.57
PACS1-214ENST00000533811 CIAO1O76071 339 aa11.47□□□□□ -0.57
PACS1-214ENST00000533811 UBTFL1P0CB47 393 aaPredicted RBP11.47□□□□□ -0.57
PACS1-214ENST00000533811 IL15P40933 162 aaPredicted RBP11.47□□□□□ -0.57
PACS1-214ENST00000533811 RASGRF1Q13972 1273 aa11.47□□□□□ -0.57
PACS1-214ENST00000533811 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
PACS1-214ENST00000533811 CCAR1Q8IX12 1150 aaKnown RBP11.47□□□□□ -0.57
PACS1-214ENST00000533811 SSH1Q8WYL5 1049 aa11.47□□□□□ -0.57
PACS1-214ENST00000533811 FAM161BQ96MY7 647 aa11.47□□□□□ -0.57
PACS1-214ENST00000533811 OSBPL5Q9H0X9 879 aaPredicted RBP11.47□□□□□ -0.57
PACS1-214ENST00000533811 CWC22Q9HCG8 908 aaKnown RBP11.47□□□□□ -0.57
PACS1-214ENST00000533811 OGDHLQ9ULD0 1010 aa11.47□□□□□ -0.57
PACS1-214ENST00000533811 USP17L5A8MUK1 530 aa11.46□□□□□ -0.57
PACS1-214ENST00000533811 TBC1D12O60347 775 aa11.46□□□□□ -0.57
PACS1-214ENST00000533811 ZKSCAN1P17029 563 aaPredicted RBP11.46□□□□□ -0.57
PACS1-214ENST00000533811 MECOMQ03112 1051 aa11.46□□□□□ -0.57
PACS1-214ENST00000533811 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
PACS1-214ENST00000533811 NUDT12Q9BQG2 462 aa11.46□□□□□ -0.57
PACS1-214ENST00000533811 AS3MTQ9HBK9 375 aa11.46□□□□□ -0.57
PACS1-214ENST00000533811 TMOD4Q9NZQ9 345 aa11.46□□□□□ -0.57
PACS1-214ENST00000533811 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
PACS1-214ENST00000533811 FRMPD3Q5JV73 1810 aa11.46□□□□□ -0.58
PACS1-214ENST00000533811 ANP32CO43423 234 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 CAP2P40123 477 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 RHBDL3P58872 404 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 TIMM10P62072 90 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 MTMR2Q13614 643 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 RRP1BQ14684 758 aaKnown RBP11.45□□□□□ -0.58
PACS1-214ENST00000533811 LRRC26Q2I0M4 334 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.45□□□□□ -0.58
PACS1-214ENST00000533811 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 SOCS4Q8WXH5 440 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 P2RX7Q99572 595 aaKnown RBP11.45□□□□□ -0.58
PACS1-214ENST00000533811 PAGR1Q9BTK6 254 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 MORF4L1Q9UBU8 362 aa11.45□□□□□ -0.58
PACS1-214ENST00000533811 GPR75-ASB3A0A0A6YYF3 556 aa11.44□□□□□ -0.58
PACS1-214ENST00000533811 LDHCP07864 332 aa11.44□□□□□ -0.58
PACS1-214ENST00000533811 CCND3P30281 292 aaPredicted RBP11.44□□□□□ -0.58
PACS1-214ENST00000533811 CACNB2Q08289 660 aaPredicted RBP11.44□□□□□ -0.58
PACS1-214ENST00000533811 MAP3K21Q5TCX8 1036 aa11.44□□□□□ -0.58
PACS1-214ENST00000533811 GPRC5AQ8NFJ5 357 aa11.44□□□□□ -0.58
PACS1-214ENST00000533811 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
PACS1-214ENST00000533811 XAGE2Q96GT9 111 aa11.44□□□□□ -0.58
PACS1-214ENST00000533811 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
PACS1-214ENST00000533811 LBHD1Q9BQE6 289 aaPredicted RBP11.44□□□□□ -0.58
PACS1-214ENST00000533811 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
PACS1-214ENST00000533811 RAI14Q9P0K7 980 aa11.44□□□□□ -0.58
PACS1-214ENST00000533811 A0A1B0GUL7 405 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 HERVK_113P62684 666 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 GSTO1P78417 241 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
PACS1-214ENST00000533811 CCL14Q16627 93 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 GORABQ5T7V8 394 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 PI16Q6UXB8 463 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 TBC1D9Q6ZT07 1266 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 GUCD1Q96NT3 240 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 NOL10Q9BSC4 688 aaKnown RBP11.43□□□□□ -0.58
PACS1-214ENST00000533811 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 TXNRD2Q9NNW7 524 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 SIPA1L1O43166 1804 aa11.43□□□□□ -0.58
PACS1-214ENST00000533811 PDS5AQ29RF7 1337 aaKnown RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 MAST2Q6P0Q8 1798 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 NPM3O75607 178 aaKnown RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 GDF11O95390 407 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 COL6A1P12109 1028 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 XRCC5P13010 732 aaKnown RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 MAPK4P31152 587 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 RGS2P41220 211 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 BACE1P56817 501 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 ERVK-9P63128 1117 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 ERVK-24P63145 666 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 TFCP2Q12800 502 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 ZNF697Q5TEC3 545 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 WDR78Q5VTH9 848 aa11.42□□□□□ -0.58
PACS1-214ENST00000533811 TRMT44Q8IYL2 757 aaKnown RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 CRACR2BQ8N4Y2 399 aaPredicted RBP11.42□□□□□ -0.58
PACS1-214ENST00000533811 ZNF384Q8TF68 577 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms