RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ZYXQ15942 572 aaKnown RBP12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 HAUS7Q99871 368 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 PIK3C2BO00750 1634 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 ASIC1P78348 528 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 NSMFQ6X4W1 530 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 TRIM47Q96LD4 638 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 SRP68Q9UHB9 627 aaKnown RBP12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 SGSM2O43147 1006 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 ZSCAN12O43309 604 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 BCAMP50895 628 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 SMTNP53814 917 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 HACE1Q8IYU2 909 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 TBC1D5Q92609 795 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 TFIP11Q9UBB9 837 aaKnown RBP12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 KIDINS220Q9ULH0 1771 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 IQCA1LA6NCM1 817 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 URI1O94763 535 aaPredicted RBP12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 DNM2P50570 870 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 IPO4Q8TEX9 1081 aaKnown RBP12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 IFT74Q96LB3 600 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 SSH2Q76I76 1423 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 ICA1Q05084 483 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 BMS1Q14692 1282 aaKnown RBP12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 GADL1Q6ZQY3 521 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 FCHSD1Q86WN1 690 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 MSANTD4Q8NCY6 345 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 TCEANC2Q96MN5 208 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 CTAGE1Q96RT6 745 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 MADDQ8WXG6 1647 aa12.73□□□□□ -0.37
AMBRA1-211ENST00000533727 SPATA31A5Q5VU36 1347 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 SPATA31A7Q8IWB4 1347 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 SPATA31D1Q6ZQQ2 1576 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 BICDL2A1A5D9 508 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 SLC27A2O14975 620 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 IGSF3O75054 1194 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 CA8P35219 290 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 NONOQ15233 471 aaKnown RBP eCLIP12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 C16orf45Q96MC5 204 aaPredicted RBP12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 SPTLC2O15270 562 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 CCDC65Q8IXS2 484 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 IQUBQ8NA54 791 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 AXIN2Q9Y2T1 843 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 CDHR2Q9BYE9 1310 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 USP17L12C9JPN9 530 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 USP17L21D6R901 530 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 NEMFO60524 1076 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 NEFHP12036 1026 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 SCNN1DP51172 638 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 CAMK4Q16566 473 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 ABCB5Q2M3G0 1257 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 MAP9Q49MG5 647 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 XRCC6P12956 609 aaKnown RBP eCLIP12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 PODNQ7Z5L7 613 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 EXOC7Q9UPT5 735 aa12.72□□□□□ -0.37
AMBRA1-211ENST00000533727 NRXN1Q9ULB1 1477 aa12.71□□□□□ -0.37
AMBRA1-211ENST00000533727 AK2P54819 239 aa12.71□□□□□ -0.37
AMBRA1-211ENST00000533727 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
AMBRA1-211ENST00000533727 ZKSCAN3Q9BRR0 538 aa12.71□□□□□ -0.37
AMBRA1-211ENST00000533727 KRT222Q8N1A0 295 aa12.71□□□□□ -0.37
AMBRA1-211ENST00000533727 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.38
AMBRA1-211ENST00000533727 TDRD12Q587J7 1177 aaKnown RBP12.71□□□□□ -0.38
AMBRA1-211ENST00000533727 TAX1BP1Q86VP1 789 aa12.71□□□□□ -0.38
AMBRA1-211ENST00000533727 C2orf69Q8N8R5 385 aa12.71□□□□□ -0.38
AMBRA1-211ENST00000533727 LRRC45Q96CN5 670 aa12.71□□□□□ -0.38
AMBRA1-211ENST00000533727 PRDM1O75626 825 aa12.71□□□□□ -0.38
AMBRA1-211ENST00000533727 PROSER3Q2NL68 480 aa12.71□□□□□ -0.38
AMBRA1-211ENST00000533727 PNMA3Q9UL41 463 aa12.71□□□□□ -0.38
AMBRA1-211ENST00000533727 NEXMIFQ5QGS0 1516 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 SUSD4Q5VX71 490 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 ZBTB7AO95365 584 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 KLHL40Q2TBA0 621 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 LRRC24Q50LG9 513 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 IFNL3Q8IZI9 196 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 TECPR2O15040 1411 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 RPAP1Q9BWH6 1393 aaPredicted RBP12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 LPXNO60711 386 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 LETM2Q2VYF4 491 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 GPATCH4Q5T3I0 446 aaKnown RBP12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 GALNT17Q6IS24 598 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 CSRNP1Q96S65 589 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
AMBRA1-211ENST00000533727 CCDC129Q6ZRS4 1044 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 PAGR1Q9BTK6 254 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 DBNDD1Q9H9R9 158 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 F13A1P00488 732 aa12.69□□□□□ -0.38
AMBRA1-211ENST00000533727 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms