RNA–Protein interactions for RNA: ENST00000533507.5

NDUFS3-211, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-211ENST00000533507 DDTLA6NHG4 134 aaPredicted RBP31.33■■■□□ 2.61
NDUFS3-211ENST00000533507 NPM3O75607 178 aaKnown RBP31.33■■■□□ 2.61
NDUFS3-211ENST00000533507 RPS6KB1P23443 525 aa31.33■■■□□ 2.61
NDUFS3-211ENST00000533507 TNNI2P48788 182 aa31.33■■■□□ 2.61
NDUFS3-211ENST00000533507 LAMB1P07942 1786 aa31.32■■■□□ 2.6
NDUFS3-211ENST00000533507 FGD1P98174 961 aa31.32■■■□□ 2.6
NDUFS3-211ENST00000533507 ANGEL2Q5VTE6 544 aaKnown RBP31.32■■■□□ 2.6
NDUFS3-211ENST00000533507 NOL8Q76FK4 1167 aaKnown RBP31.32■■■□□ 2.6
NDUFS3-211ENST00000533507 L3MBTL3Q96JM7 780 aaPredicted RBP31.32■■■□□ 2.6
NDUFS3-211ENST00000533507 RANBP6O60518 1105 aaKnown RBP31.31■■■□□ 2.6
NDUFS3-211ENST00000533507 HIRAP54198 1017 aaPredicted RBP31.31■■■□□ 2.6
NDUFS3-211ENST00000533507 DHX32Q7L7V1 743 aaKnown RBP31.31■■■□□ 2.6
NDUFS3-211ENST00000533507 FAM151AQ8WW52 585 aa31.31■■■□□ 2.6
NDUFS3-211ENST00000533507 TRIM34Q9BYJ4 488 aa31.31■■■□□ 2.6
NDUFS3-211ENST00000533507 KDM4AO75164 1064 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 TNFAIP1Q13829 316 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 FKBP1CQ5VVH2 108 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 CRACR2BQ8N4Y2 399 aaPredicted RBP31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 SLC44A5Q8NCS7 719 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 LRRC2Q9BYS8 371 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 TMEM39BQ9GZU3 492 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 MCM5P33992 734 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 SH3BP5LQ7L8J4 393 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 PI4KBQ9UBF8 816 aa31.3■■■□□ 2.6
NDUFS3-211ENST00000533507 EPHX2P34913 555 aa31.29■■■□□ 2.6
NDUFS3-211ENST00000533507 CSRNP1Q96S65 589 aa31.29■■■□□ 2.6
NDUFS3-211ENST00000533507 ZNF287Q9HBT7 754 aa31.29■■■□□ 2.6
NDUFS3-211ENST00000533507 GGA3Q9NZ52 723 aa31.29■■■□□ 2.6
NDUFS3-211ENST00000533507 SERPINB13Q9UIV8 391 aa31.29■■■□□ 2.6
NDUFS3-211ENST00000533507 RASA3Q14644 834 aa31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 FAM83AQ86UY5 434 aa31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 MB21D2Q8IYB1 491 aaPredicted RBP31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 ESR2Q92731 530 aa31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 CNTNAP1P78357 1384 aa31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 DDX60LQ5H9U9 1706 aaKnown RBP31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 IQCA1LA6NCM1 817 aa31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 PCP11498 1178 aaKnown RBP31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 CDK8P49336 464 aa31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 NKX2-3Q8TAU0 364 aa31.28■■■□□ 2.6
NDUFS3-211ENST00000533507 PRC1O43663 620 aa31.27■■■□□ 2.6
NDUFS3-211ENST00000533507 CD2BP2O95400 341 aaKnown RBP31.27■■■□□ 2.6
NDUFS3-211ENST00000533507 C16orf86Q6ZW13 317 aa31.27■■■□□ 2.6
NDUFS3-211ENST00000533507 HSCBQ8IWL3 235 aa31.27■■■□□ 2.6
NDUFS3-211ENST00000533507 ZNF444Q8N0Y2 327 aaPredicted RBP31.27■■■□□ 2.6
NDUFS3-211ENST00000533507 LARP6Q9BRS8 491 aaKnown RBP31.27■■■□□ 2.6
NDUFS3-211ENST00000533507 ZSWIM5Q9P217 1185 aa31.27■■■□□ 2.6
NDUFS3-211ENST00000533507 EAPPQ56P03 285 aaPredicted RBP31.26■■■□□ 2.59
NDUFS3-211ENST00000533507 Q6ZUG5 572 aa31.26■■■□□ 2.59
NDUFS3-211ENST00000533507 CYB5R4Q7L1T6 521 aa31.26■■■□□ 2.59
NDUFS3-211ENST00000533507 ROBO3Q96MS0 1386 aa31.26■■■□□ 2.59
NDUFS3-211ENST00000533507 SLURP2P0DP57 97 aa31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 AK2P54819 239 aa31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 FAM47AQ5JRC9 791 aa31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 TSPY2A6NKD2 308 aa31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 BECN1Q14457 450 aa31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 APOBEC3FQ8IUX4 373 aaKnown RBP31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 TTC14Q96N46 770 aa31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 ZKSCAN3Q9BRR0 538 aa31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 DEFB129Q9H1M3 183 aa31.25■■■□□ 2.59
NDUFS3-211ENST00000533507 FAM196BA6NMK8 535 aa31.24■■■□□ 2.59
NDUFS3-211ENST00000533507 ORC4O43929 436 aa31.24■■■□□ 2.59
NDUFS3-211ENST00000533507 FGRP09769 529 aa31.24■■■□□ 2.59
NDUFS3-211ENST00000533507 EXOSC10Q01780 885 aaKnown RBP31.24■■■□□ 2.59
NDUFS3-211ENST00000533507 USP50Q70EL3 339 aaPredicted RBP31.24■■■□□ 2.59
NDUFS3-211ENST00000533507 FOXP4Q8IVH2 680 aaPredicted RBP31.23■■■□□ 2.59
NDUFS3-211ENST00000533507 ATRNL1Q5VV63 1379 aa31.23■■■□□ 2.59
NDUFS3-211ENST00000533507 ANTXR2P58335 489 aa31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 CDAN1Q8IWY9 1227 aa31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 ZNF526Q8TF50 670 aaPredicted RBP31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 DCPSQ96C86 337 aaKnown RBP31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 TBC1D2Q9BYX2 928 aa31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 EHD4Q9H223 541 aa31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 TAF1DQ9H5J8 278 aaPredicted RBP31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 DAXXQ9UER7 740 aaPredicted RBP31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 SWAP70Q9UH65 585 aa31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 TFAP4Q01664 338 aa31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 GABPAQ06546 454 aa31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 SNX21Q969T3 373 aa31.22■■■□□ 2.59
NDUFS3-211ENST00000533507 TSPY3P0CV98 308 aa31.21■■■□□ 2.59
NDUFS3-211ENST00000533507 TSPY8P0CW00 308 aa31.21■■■□□ 2.59
NDUFS3-211ENST00000533507 UBAC1Q9BSL1 405 aa31.21■■■□□ 2.59
NDUFS3-211ENST00000533507 RRAGCQ9HB90 399 aa31.21■■■□□ 2.59
NDUFS3-211ENST00000533507 POTECB2RU33 542 aa31.2■■■□□ 2.59
NDUFS3-211ENST00000533507 IFIT3O14879 490 aaKnown RBP31.2■■■□□ 2.59
NDUFS3-211ENST00000533507 MIGA2Q7L4E1 593 aa31.2■■■□□ 2.59
NDUFS3-211ENST00000533507 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.2■■■□□ 2.59
NDUFS3-211ENST00000533507 ERICH2A1L162 156 aa31.2■■■□□ 2.58
NDUFS3-211ENST00000533507 RASA1P20936 1047 aa31.2■■■□□ 2.58
NDUFS3-211ENST00000533507 SART3Q15020 963 aaKnown RBP31.2■■■□□ 2.58
NDUFS3-211ENST00000533507 ANKRD1Q15327 319 aa31.2■■■□□ 2.58
NDUFS3-211ENST00000533507 IQCA1Q86XH1 822 aa31.2■■■□□ 2.58
NDUFS3-211ENST00000533507 BRF1Q92994 677 aa31.2■■■□□ 2.58
NDUFS3-211ENST00000533507 NAP1L2Q9ULW6 460 aaPredicted RBP31.2■■■□□ 2.58
NDUFS3-211ENST00000533507 SLC4A3P48751 1232 aa31.19■■■□□ 2.58
NDUFS3-211ENST00000533507 MCM2P49736 904 aa31.19■■■□□ 2.58
NDUFS3-211ENST00000533507 PRAMEF18Q5VWM3 479 aa31.19■■■□□ 2.58
NDUFS3-211ENST00000533507 IL27Q8NEV9 243 aa31.19■■■□□ 2.58
NDUFS3-211ENST00000533507 GPHNQ9NQX3 736 aaPredicted RBP31.19■■■□□ 2.58
NDUFS3-211ENST00000533507 CLEC11AQ9Y240 323 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms